Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.09□□□□□ -1.59
USP11P51784 RPS17P13-201ENST00000448974 407 ntBASIC5.09□□□□□ -1.59
USP11P51784 SNORD127-201ENST00000458892 86 ntBASIC5.09□□□□□ -1.59
USP11P51784 SNORD97-201ENST00000459187 142 ntBASIC5.09□□□□□ -1.59
USP11P51784 DEFB109F-201ENST00000491870 277 ntBASIC5.09□□□□□ -1.59
USP11P51784 AP000889.1-201ENST00000530968 660 ntBASIC5.09□□□□□ -1.59
USP11P51784 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
USP11P51784 AC092470.1-201ENST00000546187 132 ntBASIC5.09□□□□□ -1.59
USP11P51784 RPL23AP84-201ENST00000571193 464 ntBASIC5.09□□□□□ -1.59
USP11P51784 MIR3128-201ENST00000581957 66 ntBASIC5.09□□□□□ -1.59
USP11P51784 MIR4697-201ENST00000582977 78 ntBASIC5.09□□□□□ -1.59
USP11P51784 AC078899.3-201ENST00000599065 212 ntBASIC5.09□□□□□ -1.59
USP11P51784 IGHV3-29-201ENST00000604817 344 ntBASIC5.09□□□□□ -1.59
USP11P51784 AC004805.2-201ENST00000605382 482 ntBASIC5.09□□□□□ -1.59
USP11P51784 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC5.09□□□□□ -1.59
USP11P51784 U2.17-201ENST00000611454 95 ntBASIC5.09□□□□□ -1.59
USP11P51784 AC137590.2-201ENST00000619709 240 ntBASIC5.09□□□□□ -1.59
USP11P51784 AC005086.4-201ENST00000623065 213 ntBASIC5.09□□□□□ -1.59
USP11P51784 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.09□□□□□ -1.59
USP11P51784 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.09□□□□□ -1.59
USP11P51784 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
USP11P51784 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
USP11P51784 AC006971.1-201ENST00000407916 4486 ntBASIC5.09□□□□□ -1.59
USP11P51784 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.09□□□□□ -1.59
USP11P51784 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.59
USP11P51784 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
USP11P51784 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.09□□□□□ -1.6
USP11P51784 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
USP11P51784 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
USP11P51784 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
USP11P51784 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.08□□□□□ -1.6
USP11P51784 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
USP11P51784 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.08□□□□□ -1.6
USP11P51784 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
USP11P51784 AL157777.2-201ENST00000258070 137 ntBASIC5.08□□□□□ -1.6
USP11P51784 Y_RNA.126-201ENST00000363382 111 ntBASIC5.08□□□□□ -1.6
USP11P51784 Y_RNA.350-201ENST00000365409 98 ntBASIC5.08□□□□□ -1.6
USP11P51784 MIR3065-201ENST00000390137 79 ntBASIC5.08□□□□□ -1.6
USP11P51784 RNU2-21P-201ENST00000410368 188 ntBASIC5.08□□□□□ -1.6
USP11P51784 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.08□□□□□ -1.6
USP11P51784 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.08□□□□□ -1.6
USP11P51784 PGBD4P6-201ENST00000421501 610 ntBASIC5.08□□□□□ -1.6
USP11P51784 RPL23AP25-201ENST00000430973 463 ntBASIC5.08□□□□□ -1.6
USP11P51784 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.08□□□□□ -1.6
USP11P51784 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
USP11P51784 NOTCH2P1-201ENST00000443481 624 ntBASIC5.08□□□□□ -1.6
USP11P51784 GEMIN8P3-201ENST00000445417 720 ntBASIC5.08□□□□□ -1.6
USP11P51784 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.08□□□□□ -1.6
USP11P51784 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.08□□□□□ -1.6
USP11P51784 AC005008.1-201ENST00000456151 612 ntBASIC5.08□□□□□ -1.6
USP11P51784 RNU7-167P-201ENST00000459160 62 ntBASIC5.08□□□□□ -1.6
USP11P51784 AC108022.1-201ENST00000493466 478 ntBASIC5.08□□□□□ -1.6
USP11P51784 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.08□□□□□ -1.6
USP11P51784 AC022616.4-201ENST00000522985 181 ntBASIC5.08□□□□□ -1.6
USP11P51784 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC5.08□□□□□ -1.6
USP11P51784 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC5.08□□□□□ -1.6
USP11P51784 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC5.08□□□□□ -1.6
USP11P51784 AC106782.4-201ENST00000568264 210 ntBASIC5.08□□□□□ -1.6
USP11P51784 AL356218.2-201ENST00000605264 187 ntBASIC5.08□□□□□ -1.6
USP11P51784 HMGB1P50-201ENST00000605814 607 ntBASIC5.08□□□□□ -1.6
USP11P51784 AC015967.1-201ENST00000619893 476 ntBASIC5.08□□□□□ -1.6
USP11P51784 AC140113.4-201ENST00000622087 222 ntBASIC5.08□□□□□ -1.6
USP11P51784 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.08□□□□□ -1.6
USP11P51784 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.08□□□□□ -1.6
USP11P51784 MAPK10-320ENST00000641462 6696 ntBASIC5.08□□□□□ -1.6
USP11P51784 AC010615.1-201ENST00000594254 1764 ntBASIC5.08□□□□□ -1.6
USP11P51784 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
USP11P51784 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.08□□□□□ -1.6
USP11P51784 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
USP11P51784 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
USP11P51784 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
USP11P51784 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
USP11P51784 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.07□□□□□ -1.6
USP11P51784 MAPK10-304ENST00000641341 3984 ntBASIC5.07□□□□□ -1.6
USP11P51784 EXOC5P1-201ENST00000510543 1969 ntBASIC5.07□□□□□ -1.6
USP11P51784 EOGT-210ENST00000615922 1931 ntBASIC5.07□□□□□ -1.6
USP11P51784 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
USP11P51784 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
USP11P51784 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
USP11P51784 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.07□□□□□ -1.6
USP11P51784 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.07□□□□□ -1.6
USP11P51784 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.07□□□□□ -1.6
USP11P51784 SNORD62.1-201ENST00000362541 86 ntBASIC5.07□□□□□ -1.6
USP11P51784 Y_RNA.60-201ENST00000362831 98 ntBASIC5.07□□□□□ -1.6
USP11P51784 RNA5SP447-201ENST00000363749 119 ntBASIC5.07□□□□□ -1.6
USP11P51784 RNU1-130P-201ENST00000363930 160 ntBASIC5.07□□□□□ -1.6
USP11P51784 RNU6-1078P-201ENST00000364522 103 ntBASIC5.07□□□□□ -1.6
USP11P51784 Y_RNA.424-201ENST00000384063 103 ntBASIC5.07□□□□□ -1.6
USP11P51784 U3.29-201ENST00000391296 212 ntBASIC5.07□□□□□ -1.6
USP11P51784 MIR1252-201ENST00000408861 65 ntBASIC5.07□□□□□ -1.6
USP11P51784 RNU6-55P-201ENST00000411092 107 ntBASIC5.07□□□□□ -1.6
USP11P51784 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC5.07□□□□□ -1.6
USP11P51784 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.07□□□□□ -1.6
USP11P51784 TMSB10P2-201ENST00000416049 131 ntBASIC5.07□□□□□ -1.6
USP11P51784 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC5.07□□□□□ -1.6
USP11P51784 RPL23AP69-201ENST00000431134 458 ntBASIC5.07□□□□□ -1.6
USP11P51784 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.07□□□□□ -1.6
USP11P51784 MRPS18BP2-201ENST00000434310 759 ntBASIC5.07□□□□□ -1.6
USP11P51784 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.07□□□□□ -1.6
USP11P51784 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms