Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AF038458.1-201ENST00000588406 262 ntBASIC3.19□□□□□ -1.9
LHX1P48742 AC012065.4-201ENST00000602445 679 ntBASIC3.19□□□□□ -1.9
LHX1P48742 AC090970.3-201ENST00000612566 866 ntBASIC3.19□□□□□ -1.9
LHX1P48742 AC104010.1-201ENST00000616889 150 ntBASIC3.19□□□□□ -1.9
LHX1P48742 AC009159.1-201ENST00000618386 642 ntBASIC3.19□□□□□ -1.9
LHX1P48742 AC010149.2-201ENST00000637608 315 ntBASIC3.19□□□□□ -1.9
LHX1P48742 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LHX1P48742 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.19□□□□□ -1.9
LHX1P48742 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.19□□□□□ -1.9
LHX1P48742 SRP72P2-201ENST00000344851 1979 ntBASIC3.18□□□□□ -1.9
LHX1P48742 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.18□□□□□ -1.9
LHX1P48742 OR4G2P-202ENST00000641004 1759 ntBASIC3.18□□□□□ -1.9
LHX1P48742 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
LHX1P48742 RNU4-21P-201ENST00000362802 126 ntBASIC3.18□□□□□ -1.9
LHX1P48742 RNU6-805P-201ENST00000365643 106 ntBASIC3.18□□□□□ -1.9
LHX1P48742 RNU1-39P-201ENST00000383897 165 ntBASIC3.18□□□□□ -1.9
LHX1P48742 MIR514A1-201ENST00000385133 98 ntBASIC3.18□□□□□ -1.9
LHX1P48742 RNU6-278P-201ENST00000390945 109 ntBASIC3.18□□□□□ -1.9
LHX1P48742 TXNP7-201ENST00000406296 293 ntBASIC3.18□□□□□ -1.9
LHX1P48742 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.18□□□□□ -1.9
LHX1P48742 CYCSP46-201ENST00000423569 204 ntBASIC3.18□□□□□ -1.9
LHX1P48742 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.18□□□□□ -1.9
LHX1P48742 AL356583.2-201ENST00000426536 280 ntBASIC3.18□□□□□ -1.9
LHX1P48742 AL356867.1-201ENST00000429623 299 ntBASIC3.18□□□□□ -1.9
LHX1P48742 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.18□□□□□ -1.9
LHX1P48742 RPL23AP22-201ENST00000437556 453 ntBASIC3.18□□□□□ -1.9
LHX1P48742 USP9YP12-201ENST00000450481 570 ntBASIC3.18□□□□□ -1.9
LHX1P48742 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.18□□□□□ -1.9
LHX1P48742 AC108059.3-201ENST00000456388 214 ntBASIC3.18□□□□□ -1.9
LHX1P48742 AC083906.5-201ENST00000503722 328 ntBASIC3.18□□□□□ -1.9
LHX1P48742 KCTD9P5-201ENST00000504141 1170 ntBASIC3.18□□□□□ -1.9
LHX1P48742 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.18□□□□□ -1.9
LHX1P48742 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.18□□□□□ -1.9
LHX1P48742 AC022616.6-201ENST00000520479 119 ntBASIC3.18□□□□□ -1.9
LHX1P48742 AC022690.1-201ENST00000526681 550 ntBASIC3.18□□□□□ -1.9
LHX1P48742 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.18□□□□□ -1.9
LHX1P48742 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.18□□□□□ -1.9
LHX1P48742 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.18□□□□□ -1.9
LHX1P48742 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.18□□□□□ -1.9
LHX1P48742 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.18□□□□□ -1.9
LHX1P48742 RPL23AP84-201ENST00000571193 464 ntBASIC3.18□□□□□ -1.9
LHX1P48742 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.18□□□□□ -1.9
LHX1P48742 AC011471.1-201ENST00000585766 187 ntBASIC3.18□□□□□ -1.9
LHX1P48742 U73023.1-201ENST00000603134 700 ntBASIC3.18□□□□□ -1.9
LHX1P48742 AL359999.1-201ENST00000604513 294 ntBASIC3.18□□□□□ -1.9
LHX1P48742 AC121334.2-201ENST00000605387 271 ntBASIC3.18□□□□□ -1.9
LHX1P48742 OR2AS2P-201ENST00000606902 342 ntBASIC3.18□□□□□ -1.9
LHX1P48742 AC103710.1-201ENST00000610003 901 ntBASIC3.18□□□□□ -1.9
LHX1P48742 AC007318.2-201ENST00000620999 243 ntBASIC3.18□□□□□ -1.9
LHX1P48742 AC021755.1-201ENST00000559747 1447 ntBASIC3.18□□□□□ -1.9
LHX1P48742 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.18□□□□□ -1.9
LHX1P48742 AL136164.4-201ENST00000625013 2135 ntBASIC3.17□□□□□ -1.9
LHX1P48742 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
LHX1P48742 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LHX1P48742 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
LHX1P48742 U3.6-201ENST00000363622 211 ntBASIC3.17□□□□□ -1.9
LHX1P48742 SNORD115.1-201ENST00000391109 76 ntBASIC3.17□□□□□ -1.9
LHX1P48742 RPL17P50-201ENST00000396131 546 ntBASIC3.17□□□□□ -1.9
LHX1P48742 Y_RNA.608-201ENST00000410647 95 ntBASIC3.17□□□□□ -1.9
LHX1P48742 RPL21P24-201ENST00000413752 448 ntBASIC3.17□□□□□ -1.9
LHX1P48742 USP9YP13-201ENST00000417797 480 ntBASIC3.17□□□□□ -1.9
LHX1P48742 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.17□□□□□ -1.9
LHX1P48742 NEK4P1-201ENST00000433383 879 ntBASIC3.17□□□□□ -1.9
LHX1P48742 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.17□□□□□ -1.9
LHX1P48742 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
LHX1P48742 SETP5-201ENST00000437270 562 ntBASIC3.17□□□□□ -1.9
LHX1P48742 MTCO3P45-201ENST00000443036 613 ntBASIC3.17□□□□□ -1.9
LHX1P48742 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.17□□□□□ -1.9
LHX1P48742 RNA5SP310-201ENST00000459084 116 ntBASIC3.17□□□□□ -1.9
LHX1P48742 AC008481.1-201ENST00000463278 396 ntBASIC3.17□□□□□ -1.9
LHX1P48742 AC092754.2-201ENST00000463506 460 ntBASIC3.17□□□□□ -1.9
LHX1P48742 AC080014.1-201ENST00000496877 1201 ntBASIC3.17□□□□□ -1.9
LHX1P48742 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.17□□□□□ -1.9
LHX1P48742 AC060788.1-201ENST00000521318 469 ntBASIC3.17□□□□□ -1.9
LHX1P48742 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.17□□□□□ -1.9
LHX1P48742 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.17□□□□□ -1.9
LHX1P48742 DEFB108A-201ENST00000530110 222 ntBASIC3.17□□□□□ -1.9
LHX1P48742 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.17□□□□□ -1.9
LHX1P48742 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LHX1P48742 AL355836.1-201ENST00000555951 870 ntBASIC3.17□□□□□ -1.9
LHX1P48742 MIR548AB-201ENST00000584917 84 ntBASIC3.17□□□□□ -1.9
LHX1P48742 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.17□□□□□ -1.9
LHX1P48742 AC009570.1-201ENST00000609599 745 ntBASIC3.17□□□□□ -1.9
LHX1P48742 AC073114.1-201ENST00000612027 490 ntBASIC3.17□□□□□ -1.9
LHX1P48742 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.17□□□□□ -1.9
LHX1P48742 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.17□□□□□ -1.9
LHX1P48742 AC025048.6-202ENST00000627667 438 ntBASIC3.17□□□□□ -1.9
LHX1P48742 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.17□□□□□ -1.9
LHX1P48742 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.17□□□□□ -1.9
LHX1P48742 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
LHX1P48742 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.16□□□□□ -1.9
LHX1P48742 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
LHX1P48742 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
LHX1P48742 SNORD116-2-201ENST00000384274 95 ntBASIC3.16□□□□□ -1.9
LHX1P48742 SNORD116-6-201ENST00000384711 96 ntBASIC3.16□□□□□ -1.9
LHX1P48742 FAT1P1-201ENST00000406588 507 ntBASIC3.16□□□□□ -1.9
LHX1P48742 MIR1302-8-201ENST00000408342 128 ntBASIC3.16□□□□□ -1.9
LHX1P48742 EEF1A1P41-201ENST00000414667 207 ntBASIC3.16□□□□□ -1.9
LHX1P48742 HMGB3P23-201ENST00000414981 585 ntBASIC3.16□□□□□ -1.9
LHX1P48742 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms