Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.44□□□□□ -2.02
RFX3P48380 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
RFX3P48380 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
RFX3P48380 AL391261.3-201ENST00000557194 520 ntBASIC2.44□□□□□ -2.02
RFX3P48380 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.44□□□□□ -2.02
RFX3P48380 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.44□□□□□ -2.02
RFX3P48380 AC060766.3-201ENST00000591442 263 ntBASIC2.44□□□□□ -2.02
RFX3P48380 AC091057.3-201ENST00000602684 733 ntBASIC2.44□□□□□ -2.02
RFX3P48380 AL160237.3-201ENST00000604114 1013 ntBASIC2.44□□□□□ -2.02
RFX3P48380 AL033523.1-201ENST00000605153 153 ntBASIC2.44□□□□□ -2.02
RFX3P48380 BX664608.1-201ENST00000610519 487 ntBASIC2.44□□□□□ -2.02
RFX3P48380 AC107075.1-201ENST00000613695 314 ntBASIC2.44□□□□□ -2.02
RFX3P48380 AC079395.3-201ENST00000615161 484 ntBASIC2.44□□□□□ -2.02
RFX3P48380 AC079228.1-201ENST00000624774 1049 ntBASIC2.44□□□□□ -2.02
RFX3P48380 AL159972.1-201ENST00000625150 448 ntBASIC2.44□□□□□ -2.02
RFX3P48380 AP003399.1-201ENST00000637534 361 ntBASIC2.44□□□□□ -2.02
RFX3P48380 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
RFX3P48380 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
RFX3P48380 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
RFX3P48380 MIR6073-201ENST00000352083 89 ntBASIC2.43□□□□□ -2.02
RFX3P48380 RNU6-859P-201ENST00000362728 107 ntBASIC2.43□□□□□ -2.02
RFX3P48380 RNU6-217P-201ENST00000384164 104 ntBASIC2.43□□□□□ -2.02
RFX3P48380 RPL23AP29-201ENST00000397284 453 ntBASIC2.43□□□□□ -2.02
RFX3P48380 AL513475.1-201ENST00000406602 315 ntBASIC2.43□□□□□ -2.02
RFX3P48380 AL096701.2-201ENST00000416920 238 ntBASIC2.43□□□□□ -2.02
RFX3P48380 MTCYBP38-201ENST00000417160 1123 ntBASIC2.43□□□□□ -2.02
RFX3P48380 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.43□□□□□ -2.02
RFX3P48380 HSFY7P-201ENST00000432672 318 ntBASIC2.43□□□□□ -2.02
RFX3P48380 ATP5F1P1-201ENST00000433775 569 ntBASIC2.43□□□□□ -2.02
RFX3P48380 HSFY8P-201ENST00000437934 318 ntBASIC2.43□□□□□ -2.02
RFX3P48380 MTND5P14-201ENST00000441481 1267 ntBASIC2.43□□□□□ -2.02
RFX3P48380 FGF7P5-201ENST00000441829 291 ntBASIC2.43□□□□□ -2.02
RFX3P48380 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.43□□□□□ -2.02
RFX3P48380 CACYBPP2-201ENST00000453625 678 ntBASIC2.43□□□□□ -2.02
RFX3P48380 HSFY5P-201ENST00000453726 309 ntBASIC2.43□□□□□ -2.02
RFX3P48380 AC005410.1-202ENST00000460347 485 ntBASIC2.43□□□□□ -2.02
RFX3P48380 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.43□□□□□ -2.02
RFX3P48380 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.43□□□□□ -2.02
RFX3P48380 AC138853.1-201ENST00000503549 823 ntBASIC2.43□□□□□ -2.02
RFX3P48380 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.43□□□□□ -2.02
RFX3P48380 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
RFX3P48380 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.43□□□□□ -2.02
RFX3P48380 AP003497.1-201ENST00000528472 562 ntBASIC2.43□□□□□ -2.02
RFX3P48380 TRAV28-201ENST00000557548 323 ntBASIC2.43□□□□□ -2.02
RFX3P48380 HMGN2P15-201ENST00000585707 270 ntBASIC2.43□□□□□ -2.02
RFX3P48380 RPL12P50-201ENST00000603116 116 ntBASIC2.43□□□□□ -2.02
RFX3P48380 AL139022.2-201ENST00000606934 443 ntBASIC2.43□□□□□ -2.02
RFX3P48380 AC245297.2-201ENST00000610119 565 ntBASIC2.43□□□□□ -2.02
RFX3P48380 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.43□□□□□ -2.02
RFX3P48380 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.43□□□□□ -2.02
RFX3P48380 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.43□□□□□ -2.02
RFX3P48380 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
RFX3P48380 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
RFX3P48380 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
RFX3P48380 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
RFX3P48380 AC092447.10-201ENST00000620607 1652 ntBASIC2.42□□□□□ -2.02
RFX3P48380 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.42□□□□□ -2.02
RFX3P48380 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
RFX3P48380 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
RFX3P48380 Y_RNA.192-201ENST00000363977 102 ntBASIC2.42□□□□□ -2.02
RFX3P48380 DEFA7P-201ENST00000382676 285 ntBASIC2.42□□□□□ -2.02
RFX3P48380 RNU6-637P-201ENST00000384050 107 ntBASIC2.42□□□□□ -2.02
RFX3P48380 MIR196B-201ENST00000384852 84 ntBASIC2.42□□□□□ -2.02
RFX3P48380 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.42□□□□□ -2.02
RFX3P48380 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.42□□□□□ -2.02
RFX3P48380 USP9YP20-201ENST00000419224 558 ntBASIC2.42□□□□□ -2.02
RFX3P48380 AL358075.3-201ENST00000426289 226 ntBASIC2.42□□□□□ -2.02
RFX3P48380 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.42□□□□□ -2.02
RFX3P48380 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.42□□□□□ -2.02
RFX3P48380 USP9YP24-201ENST00000434374 697 ntBASIC2.42□□□□□ -2.02
RFX3P48380 Z82210.1-201ENST00000440037 231 ntBASIC2.42□□□□□ -2.02
RFX3P48380 PIGFP3-201ENST00000441918 722 ntBASIC2.42□□□□□ -2.02
RFX3P48380 USP9YP17-201ENST00000444617 696 ntBASIC2.42□□□□□ -2.02
RFX3P48380 DPPA3P1-201ENST00000448050 469 ntBASIC2.42□□□□□ -2.02
RFX3P48380 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.42□□□□□ -2.02
RFX3P48380 AC027673.1-201ENST00000456245 405 ntBASIC2.42□□□□□ -2.02
RFX3P48380 ATG12P2-201ENST00000456830 416 ntBASIC2.42□□□□□ -2.02
RFX3P48380 AC134050.1-201ENST00000495088 933 ntBASIC2.42□□□□□ -2.02
RFX3P48380 AC116353.3-201ENST00000511215 249 ntBASIC2.42□□□□□ -2.02
RFX3P48380 AC024589.1-201ENST00000512207 263 ntBASIC2.42□□□□□ -2.02
RFX3P48380 AC096725.1-201ENST00000514266 313 ntBASIC2.42□□□□□ -2.02
RFX3P48380 RNU6-150P-201ENST00000516237 95 ntBASIC2.42□□□□□ -2.02
RFX3P48380 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.42□□□□□ -2.02
RFX3P48380 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
RFX3P48380 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
RFX3P48380 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.42□□□□□ -2.02
RFX3P48380 MIR4319-201ENST00000577285 85 ntBASIC2.42□□□□□ -2.02
RFX3P48380 AC022662.1-201ENST00000580252 331 ntBASIC2.42□□□□□ -2.02
RFX3P48380 MIR3162-201ENST00000581818 82 ntBASIC2.42□□□□□ -2.02
RFX3P48380 RPP40P2-201ENST00000603596 712 ntBASIC2.42□□□□□ -2.02
RFX3P48380 AC006023.1-201ENST00000603944 259 ntBASIC2.42□□□□□ -2.02
RFX3P48380 AC006270.3-201ENST00000605967 1036 ntBASIC2.42□□□□□ -2.02
RFX3P48380 AC131235.4-201ENST00000609288 620 ntBASIC2.42□□□□□ -2.02
RFX3P48380 SNHG22-203ENST00000617833 660 ntBASIC2.42□□□□□ -2.02
RFX3P48380 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
RFX3P48380 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.42□□□□□ -2.02
RFX3P48380 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.42□□□□□ -2.02
RFX3P48380 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
RFX3P48380 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.41□□□□□ -2.02
RFX3P48380 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 151.2 ms