Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 FAM60BP-201ENST00000578364 658 ntBASIC2.43□□□□□ -2.02
BRCA1P38398 AC068620.3-201ENST00000602749 560 ntBASIC2.43□□□□□ -2.02
BRCA1P38398 AC068790.3-201ENST00000602988 553 ntBASIC2.43□□□□□ -2.02
BRCA1P38398 AC019159.1-201ENST00000605094 187 ntBASIC2.43□□□□□ -2.02
BRCA1P38398 AC006329.2-201ENST00000611491 394 ntBASIC2.43□□□□□ -2.02
BRCA1P38398 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
BRCA1P38398 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
BRCA1P38398 SNORA51.11-201ENST00000384442 131 ntBASIC2.42□□□□□ -2.02
BRCA1P38398 AL358453.1-201ENST00000422522 250 ntBASIC2.42□□□□□ -2.02
BRCA1P38398 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.42□□□□□ -2.02
BRCA1P38398 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.42□□□□□ -2.02
BRCA1P38398 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.42□□□□□ -2.02
BRCA1P38398 AC007182.2-201ENST00000489251 402 ntBASIC2.42□□□□□ -2.02
BRCA1P38398 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC2.42□□□□□ -2.02
BRCA1P38398 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.42□□□□□ -2.02
BRCA1P38398 RNU6-885P-201ENST00000516607 104 ntBASIC2.42□□□□□ -2.02
BRCA1P38398 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.42□□□□□ -2.02
BRCA1P38398 AC092451.2-201ENST00000538746 658 ntBASIC2.42□□□□□ -2.02
BRCA1P38398 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.42□□□□□ -2.02
BRCA1P38398 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC2.42□□□□□ -2.02
BRCA1P38398 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.42□□□□□ -2.02
BRCA1P38398 AC105224.1-201ENST00000587055 421 ntBASIC2.42□□□□□ -2.02
BRCA1P38398 AC012669.1-201ENST00000603209 283 ntBASIC2.42□□□□□ -2.02
BRCA1P38398 AC073387.2-201ENST00000604797 784 ntBASIC2.42□□□□□ -2.02
BRCA1P38398 AC008083.4-201ENST00000615076 444 ntBASIC2.42□□□□□ -2.02
BRCA1P38398 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.42□□□□□ -2.02
BRCA1P38398 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.42□□□□□ -2.02
BRCA1P38398 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.42□□□□□ -2.02
BRCA1P38398 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.42□□□□□ -2.02
BRCA1P38398 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.41□□□□□ -2.02
BRCA1P38398 TXNP7-201ENST00000406296 293 ntBASIC2.41□□□□□ -2.02
BRCA1P38398 AC005005.2-201ENST00000420779 380 ntBASIC2.41□□□□□ -2.02
BRCA1P38398 HSPE1P1-201ENST00000421494 318 ntBASIC2.41□□□□□ -2.02
BRCA1P38398 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.41□□□□□ -2.02
BRCA1P38398 AC233728.2-201ENST00000425348 757 ntBASIC2.41□□□□□ -2.02
BRCA1P38398 PSMA6P3-201ENST00000428242 164 ntBASIC2.41□□□□□ -2.02
BRCA1P38398 AL356867.1-201ENST00000429623 299 ntBASIC2.41□□□□□ -2.02
BRCA1P38398 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.41□□□□□ -2.02
BRCA1P38398 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.41□□□□□ -2.02
BRCA1P38398 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.41□□□□□ -2.02
BRCA1P38398 AC010376.1-201ENST00000522101 334 ntBASIC2.41□□□□□ -2.02
BRCA1P38398 FAM92A1P1-201ENST00000528023 890 ntBASIC2.41□□□□□ -2.02
BRCA1P38398 AP003168.1-201ENST00000530091 307 ntBASIC2.41□□□□□ -2.02
BRCA1P38398 AC125611.1-201ENST00000549563 229 ntBASIC2.41□□□□□ -2.02
BRCA1P38398 ARL2BPP2-201ENST00000550907 489 ntBASIC2.41□□□□□ -2.02
BRCA1P38398 RPS3AP4-201ENST00000555161 764 ntBASIC2.41□□□□□ -2.02
BRCA1P38398 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
BRCA1P38398 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.41□□□□□ -2.02
BRCA1P38398 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.41□□□□□ -2.02
BRCA1P38398 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.41□□□□□ -2.02
BRCA1P38398 MIR4275-201ENST00000636486 87 ntBASIC2.41□□□□□ -2.02
BRCA1P38398 MKKS-204ENST00000639674 192 ntBASIC2.41□□□□□ -2.02
BRCA1P38398 Y_RNA.110-201ENST00000363220 99 ntBASIC2.41□□□□□ -2.02
BRCA1P38398 RNU6-560P-201ENST00000364007 108 ntBASIC2.41□□□□□ -2.02
BRCA1P38398 RNU6-468P-201ENST00000384003 109 ntBASIC2.41□□□□□ -2.02
BRCA1P38398 MTCYBP32-201ENST00000427945 1084 ntBASIC2.41□□□□□ -2.02
BRCA1P38398 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.41□□□□□ -2.02
BRCA1P38398 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.41□□□□□ -2.02
BRCA1P38398 HMGB1P31-201ENST00000437242 427 ntBASIC2.41□□□□□ -2.02
BRCA1P38398 AC009237.8-201ENST00000445492 379 ntBASIC2.41□□□□□ -2.02
BRCA1P38398 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.41□□□□□ -2.02
BRCA1P38398 RPL7P5-201ENST00000471472 736 ntBASIC2.41□□□□□ -2.02
BRCA1P38398 RPL31P60-201ENST00000478450 367 ntBASIC2.41□□□□□ -2.02
BRCA1P38398 RPL23AP63-201ENST00000498752 471 ntBASIC2.41□□□□□ -2.02
BRCA1P38398 GTF2IP9-201ENST00000502460 301 ntBASIC2.41□□□□□ -2.02
BRCA1P38398 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
BRCA1P38398 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.41□□□□□ -2.02
BRCA1P38398 SNORA31.26-201ENST00000517250 137 ntBASIC2.41□□□□□ -2.02
BRCA1P38398 AP003355.1-201ENST00000518956 587 ntBASIC2.41□□□□□ -2.02
BRCA1P38398 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.41□□□□□ -2.02
BRCA1P38398 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.41□□□□□ -2.02
BRCA1P38398 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
BRCA1P38398 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.41□□□□□ -2.02
BRCA1P38398 AC093510.2-201ENST00000562820 896 ntBASIC2.41□□□□□ -2.02
BRCA1P38398 AC090666.1-201ENST00000578241 445 ntBASIC2.41□□□□□ -2.02
BRCA1P38398 AP001542.2-201ENST00000593141 364 ntBASIC2.41□□□□□ -2.02
BRCA1P38398 AL512506.1-201ENST00000613918 449 ntBASIC2.41□□□□□ -2.02
BRCA1P38398 AC025588.4-201ENST00000615802 908 ntBASIC2.41□□□□□ -2.02
BRCA1P38398 AC107308.1-201ENST00000615897 301 ntBASIC2.41□□□□□ -2.02
BRCA1P38398 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
BRCA1P38398 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.02
BRCA1P38398 RNA5SP38-201ENST00000410750 119 ntBASIC2.4□□□□□ -2.03
BRCA1P38398 USP9YP19-201ENST00000412165 485 ntBASIC2.4□□□□□ -2.03
BRCA1P38398 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.4□□□□□ -2.03
BRCA1P38398 USP9YP13-201ENST00000417797 480 ntBASIC2.4□□□□□ -2.03
BRCA1P38398 USP9YP21-201ENST00000420603 432 ntBASIC2.4□□□□□ -2.03
BRCA1P38398 AC093155.1-201ENST00000440164 826 ntBASIC2.4□□□□□ -2.03
BRCA1P38398 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.03
BRCA1P38398 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.4□□□□□ -2.03
BRCA1P38398 AC015908.1-201ENST00000478739 476 ntBASIC2.4□□□□□ -2.03
BRCA1P38398 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.4□□□□□ -2.03
BRCA1P38398 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
BRCA1P38398 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.4□□□□□ -2.03
BRCA1P38398 AL356575.1-201ENST00000603008 283 ntBASIC2.4□□□□□ -2.03
BRCA1P38398 AL160237.3-201ENST00000604114 1013 ntBASIC2.4□□□□□ -2.03
BRCA1P38398 AC084768.2-201ENST00000622736 221 ntBASIC2.4□□□□□ -2.03
BRCA1P38398 AC068880.4-201ENST00000623082 495 ntBASIC2.4□□□□□ -2.03
BRCA1P38398 AC010872.1-201ENST00000624225 675 ntBASIC2.4□□□□□ -2.03
BRCA1P38398 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.4□□□□□ -2.03
BRCA1P38398 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms