Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 RNU4-68P-201ENST00000364314 141 ntBASIC2.53□□□□□ -2
FDFT1P37268 RNU6-621P-201ENST00000364752 109 ntBASIC2.53□□□□□ -2
FDFT1P37268 RNU6-217P-201ENST00000384164 104 ntBASIC2.53□□□□□ -2
FDFT1P37268 SNORA41-201ENST00000384675 132 ntBASIC2.53□□□□□ -2
FDFT1P37268 AL356421.1-201ENST00000403255 413 ntBASIC2.53□□□□□ -2
FDFT1P37268 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.53□□□□□ -2
FDFT1P37268 RNU2-52P-201ENST00000410680 190 ntBASIC2.53□□□□□ -2
FDFT1P37268 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.53□□□□□ -2
FDFT1P37268 AL354692.1-201ENST00000423044 315 ntBASIC2.53□□□□□ -2
FDFT1P37268 AC063976.3-201ENST00000426849 329 ntBASIC2.53□□□□□ -2
FDFT1P37268 AC008850.1-201ENST00000427546 362 ntBASIC2.53□□□□□ -2
FDFT1P37268 ZYG11AP1-201ENST00000430329 837 ntBASIC2.53□□□□□ -2
FDFT1P37268 ARL5AP4-201ENST00000430731 512 ntBASIC2.53□□□□□ -2
FDFT1P37268 GTF2IP20-201ENST00000431663 360 ntBASIC2.53□□□□□ -2
FDFT1P37268 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.53□□□□□ -2
FDFT1P37268 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.53□□□□□ -2
FDFT1P37268 RPL21P134-201ENST00000453468 483 ntBASIC2.53□□□□□ -2
FDFT1P37268 MEMO1P3-201ENST00000459811 302 ntBASIC2.53□□□□□ -2
FDFT1P37268 LARP1BP2-201ENST00000486594 519 ntBASIC2.53□□□□□ -2
FDFT1P37268 AC108729.1-201ENST00000487812 947 ntBASIC2.53□□□□□ -2
FDFT1P37268 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.53□□□□□ -2
FDFT1P37268 CDC42P4-201ENST00000510507 563 ntBASIC2.53□□□□□ -2
FDFT1P37268 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.53□□□□□ -2
FDFT1P37268 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.53□□□□□ -2
FDFT1P37268 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.53□□□□□ -2
FDFT1P37268 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.53□□□□□ -2
FDFT1P37268 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.53□□□□□ -2
FDFT1P37268 AC090616.3-201ENST00000582184 217 ntBASIC2.53□□□□□ -2
FDFT1P37268 AL353997.4-201ENST00000586196 166 ntBASIC2.53□□□□□ -2
FDFT1P37268 VN1R92P-201ENST00000598511 928 ntBASIC2.53□□□□□ -2
FDFT1P37268 NRBF2P5-201ENST00000603087 788 ntBASIC2.53□□□□□ -2
FDFT1P37268 AC245297.2-201ENST00000610119 565 ntBASIC2.53□□□□□ -2
FDFT1P37268 U4.3-201ENST00000621047 82 ntBASIC2.53□□□□□ -2
FDFT1P37268 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.53□□□□□ -2
FDFT1P37268 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.53□□□□□ -2
FDFT1P37268 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
FDFT1P37268 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.53□□□□□ -2.01
FDFT1P37268 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.52□□□□□ -2.01
FDFT1P37268 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.52□□□□□ -2.01
FDFT1P37268 RNU6-289P-201ENST00000364093 107 ntBASIC2.52□□□□□ -2.01
FDFT1P37268 RNU6-461P-201ENST00000364195 107 ntBASIC2.52□□□□□ -2.01
FDFT1P37268 RNU6-7-201ENST00000364784 107 ntBASIC2.52□□□□□ -2.01
FDFT1P37268 U8.8-201ENST00000365399 135 ntBASIC2.52□□□□□ -2.01
FDFT1P37268 RNU6-8-201ENST00000365467 107 ntBASIC2.52□□□□□ -2.01
FDFT1P37268 MIR34A-201ENST00000385130 110 ntBASIC2.52□□□□□ -2.01
FDFT1P37268 USP9YP33-201ENST00000412220 421 ntBASIC2.52□□□□□ -2.01
FDFT1P37268 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.52□□□□□ -2.01
FDFT1P37268 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.52□□□□□ -2.01
FDFT1P37268 AC098826.1-201ENST00000433943 471 ntBASIC2.52□□□□□ -2.01
FDFT1P37268 RPS25P9-201ENST00000435591 252 ntBASIC2.52□□□□□ -2.01
FDFT1P37268 USP9YP35-201ENST00000435696 412 ntBASIC2.52□□□□□ -2.01
FDFT1P37268 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.52□□□□□ -2.01
FDFT1P37268 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.52□□□□□ -2.01
FDFT1P37268 AC009296.1-201ENST00000443146 155 ntBASIC2.52□□□□□ -2.01
FDFT1P37268 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.52□□□□□ -2.01
FDFT1P37268 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.52□□□□□ -2.01
FDFT1P37268 MTND1P9-201ENST00000453775 944 ntBASIC2.52□□□□□ -2.01
FDFT1P37268 AP1S2P1-201ENST00000457344 379 ntBASIC2.52□□□□□ -2.01
FDFT1P37268 AC104563.1-201ENST00000476147 376 ntBASIC2.52□□□□□ -2.01
FDFT1P37268 AC021382.1-201ENST00000483523 359 ntBASIC2.52□□□□□ -2.01
FDFT1P37268 AC138853.1-201ENST00000503549 823 ntBASIC2.52□□□□□ -2.01
FDFT1P37268 SNORA31.11-201ENST00000516528 139 ntBASIC2.52□□□□□ -2.01
FDFT1P37268 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
FDFT1P37268 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.52□□□□□ -2.01
FDFT1P37268 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.52□□□□□ -2.01
FDFT1P37268 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.52□□□□□ -2.01
FDFT1P37268 AC009712.1-201ENST00000564938 316 ntBASIC2.52□□□□□ -2.01
FDFT1P37268 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.52□□□□□ -2.01
FDFT1P37268 AC011471.1-201ENST00000585766 187 ntBASIC2.52□□□□□ -2.01
FDFT1P37268 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.52□□□□□ -2.01
FDFT1P37268 RPL12P50-201ENST00000603116 116 ntBASIC2.52□□□□□ -2.01
FDFT1P37268 AC245517.5-201ENST00000611529 162 ntBASIC2.52□□□□□ -2.01
FDFT1P37268 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.52□□□□□ -2.01
FDFT1P37268 AL603758.1-201ENST00000618654 241 ntBASIC2.52□□□□□ -2.01
FDFT1P37268 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
FDFT1P37268 AC099786.3-201ENST00000565735 1410 ntBASIC2.51□□□□□ -2.01
FDFT1P37268 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.51□□□□□ -2.01
FDFT1P37268 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
FDFT1P37268 RNU6-637P-201ENST00000384050 107 ntBASIC2.51□□□□□ -2.01
FDFT1P37268 AL122016.1-201ENST00000403365 367 ntBASIC2.51□□□□□ -2.01
FDFT1P37268 COTL1P1-201ENST00000422309 375 ntBASIC2.51□□□□□ -2.01
FDFT1P37268 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.51□□□□□ -2.01
FDFT1P37268 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.51□□□□□ -2.01
FDFT1P37268 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.51□□□□□ -2.01
FDFT1P37268 SNRPEP7-201ENST00000438350 220 ntBASIC2.51□□□□□ -2.01
FDFT1P37268 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.51□□□□□ -2.01
FDFT1P37268 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.51□□□□□ -2.01
FDFT1P37268 AC104389.3-201ENST00000445629 235 ntBASIC2.51□□□□□ -2.01
FDFT1P37268 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.51□□□□□ -2.01
FDFT1P37268 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.51□□□□□ -2.01
FDFT1P37268 RPS20P22-201ENST00000473700 357 ntBASIC2.51□□□□□ -2.01
FDFT1P37268 RPL23AP45-201ENST00000476406 468 ntBASIC2.51□□□□□ -2.01
FDFT1P37268 HMGB1P36-201ENST00000487709 576 ntBASIC2.51□□□□□ -2.01
FDFT1P37268 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.51□□□□□ -2.01
FDFT1P37268 AC024589.1-201ENST00000512207 263 ntBASIC2.51□□□□□ -2.01
FDFT1P37268 MRPS36P2-201ENST00000512569 299 ntBASIC2.51□□□□□ -2.01
FDFT1P37268 RN7SKP24-201ENST00000515888 284 ntBASIC2.51□□□□□ -2.01
FDFT1P37268 RNA5SP291-201ENST00000517222 105 ntBASIC2.51□□□□□ -2.01
FDFT1P37268 RNU6-840P-201ENST00000517275 65 ntBASIC2.51□□□□□ -2.01
FDFT1P37268 AC022634.1-201ENST00000520765 532 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms