Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AC068313.1-201ENST00000604028 1008 ntBASIC2.52□□□□□ -2.01
RORAP35398 AC013553.2-201ENST00000604244 589 ntBASIC2.52□□□□□ -2.01
RORAP35398 AC006270.3-201ENST00000605967 1036 ntBASIC2.52□□□□□ -2.01
RORAP35398 AL158211.4-201ENST00000606988 584 ntBASIC2.52□□□□□ -2.01
RORAP35398 AC004067.1-201ENST00000608733 700 ntBASIC2.52□□□□□ -2.01
RORAP35398 MIR6817-201ENST00000615588 66 ntBASIC2.52□□□□□ -2.01
RORAP35398 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.52□□□□□ -2.01
RORAP35398 AC010297.1-201ENST00000623948 149 ntBASIC2.52□□□□□ -2.01
RORAP35398 OR5H6-203ENST00000642105 978 ntBASIC2.52□□□□□ -2.01
RORAP35398 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RORAP35398 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.52□□□□□ -2.01
RORAP35398 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
RORAP35398 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
RORAP35398 RNA5SP393-201ENST00000363423 117 ntBASIC2.51□□□□□ -2.01
RORAP35398 RNU5E-8P-201ENST00000363502 116 ntBASIC2.51□□□□□ -2.01
RORAP35398 RNU6-301P-201ENST00000384277 107 ntBASIC2.51□□□□□ -2.01
RORAP35398 MIR1284-201ENST00000408337 120 ntBASIC2.51□□□□□ -2.01
RORAP35398 AL365496.1-201ENST00000426885 215 ntBASIC2.51□□□□□ -2.01
RORAP35398 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.51□□□□□ -2.01
RORAP35398 TAAR7P-201ENST00000436141 242 ntBASIC2.51□□□□□ -2.01
RORAP35398 RPS15AP7-201ENST00000439294 405 ntBASIC2.51□□□□□ -2.01
RORAP35398 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.51□□□□□ -2.01
RORAP35398 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.51□□□□□ -2.01
RORAP35398 AC009237.8-201ENST00000445492 379 ntBASIC2.51□□□□□ -2.01
RORAP35398 AL009048.1-201ENST00000450437 298 ntBASIC2.51□□□□□ -2.01
RORAP35398 MTND1P16-201ENST00000465177 898 ntBASIC2.51□□□□□ -2.01
RORAP35398 RN7SL429P-201ENST00000479090 223 ntBASIC2.51□□□□□ -2.01
RORAP35398 AL135752.1-201ENST00000479477 471 ntBASIC2.51□□□□□ -2.01
RORAP35398 RN7SL489P-201ENST00000486185 223 ntBASIC2.51□□□□□ -2.01
RORAP35398 RN7SL327P-201ENST00000488659 223 ntBASIC2.51□□□□□ -2.01
RORAP35398 UBE2V1P12-201ENST00000503954 474 ntBASIC2.51□□□□□ -2.01
RORAP35398 TTC39CP1-201ENST00000512513 755 ntBASIC2.51□□□□□ -2.01
RORAP35398 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.51□□□□□ -2.01
RORAP35398 RNU6-928P-201ENST00000516876 104 ntBASIC2.51□□□□□ -2.01
RORAP35398 AC025881.1-201ENST00000518851 512 ntBASIC2.51□□□□□ -2.01
RORAP35398 AL355836.1-201ENST00000555951 870 ntBASIC2.51□□□□□ -2.01
RORAP35398 AC009097.3-201ENST00000563557 1018 ntBASIC2.51□□□□□ -2.01
RORAP35398 AMZ2P1-203ENST00000565833 850 ntBASIC2.51□□□□□ -2.01
RORAP35398 AC234778.2-201ENST00000566241 354 ntBASIC2.51□□□□□ -2.01
RORAP35398 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.51□□□□□ -2.01
RORAP35398 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.51□□□□□ -2.01
RORAP35398 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.51□□□□□ -2.01
RORAP35398 AC026790.2-201ENST00000606282 430 ntBASIC2.51□□□□□ -2.01
RORAP35398 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.51□□□□□ -2.01
RORAP35398 RN7SL853P-201ENST00000617250 223 ntBASIC2.51□□□□□ -2.01
RORAP35398 CR381653.2-201ENST00000624041 768 ntBASIC2.51□□□□□ -2.01
RORAP35398 IGHVIII-44-202ENST00000636235 289 ntBASIC2.51□□□□□ -2.01
RORAP35398 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
RORAP35398 AC080100.1-201ENST00000624239 5356 ntBASIC2.51□□□□□ -2.01
RORAP35398 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
RORAP35398 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
RORAP35398 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
RORAP35398 AC131280.1-202ENST00000624067 4211 ntBASIC2.51□□□□□ -2.01
RORAP35398 SDAD1P2-201ENST00000441308 2028 ntBASIC2.51□□□□□ -2.01
RORAP35398 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.51□□□□□ -2.01
RORAP35398 CR848007.1-201ENST00000442354 1699 ntBASIC2.5□□□□□ -2.01
RORAP35398 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
RORAP35398 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
RORAP35398 ZNF29P-201ENST00000225587 168 ntBASIC2.5□□□□□ -2.01
RORAP35398 RNU6-270P-201ENST00000364131 105 ntBASIC2.5□□□□□ -2.01
RORAP35398 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
RORAP35398 RNU6-1035P-201ENST00000384477 107 ntBASIC2.5□□□□□ -2.01
RORAP35398 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
RORAP35398 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
RORAP35398 TAS2R15P-201ENST00000390674 928 ntBASIC2.5□□□□□ -2.01
RORAP35398 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.5□□□□□ -2.01
RORAP35398 MTCYBP38-201ENST00000417160 1123 ntBASIC2.5□□□□□ -2.01
RORAP35398 NDUFB4P7-201ENST00000423198 363 ntBASIC2.5□□□□□ -2.01
RORAP35398 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC2.5□□□□□ -2.01
RORAP35398 MTCO2P23-201ENST00000425216 680 ntBASIC2.5□□□□□ -2.01
RORAP35398 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.5□□□□□ -2.01
RORAP35398 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC2.5□□□□□ -2.01
RORAP35398 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.5□□□□□ -2.01
RORAP35398 HSFY7P-201ENST00000432672 318 ntBASIC2.5□□□□□ -2.01
RORAP35398 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.5□□□□□ -2.01
RORAP35398 RPS25P9-201ENST00000435591 252 ntBASIC2.5□□□□□ -2.01
RORAP35398 HSFY8P-201ENST00000437934 318 ntBASIC2.5□□□□□ -2.01
RORAP35398 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.5□□□□□ -2.01
RORAP35398 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.5□□□□□ -2.01
RORAP35398 HSFY5P-201ENST00000453726 309 ntBASIC2.5□□□□□ -2.01
RORAP35398 AL109741.2-201ENST00000455561 343 ntBASIC2.5□□□□□ -2.01
RORAP35398 RNU7-23P-201ENST00000459465 62 ntBASIC2.5□□□□□ -2.01
RORAP35398 AL049874.1-201ENST00000489560 388 ntBASIC2.5□□□□□ -2.01
RORAP35398 AC116353.3-201ENST00000511215 249 ntBASIC2.5□□□□□ -2.01
RORAP35398 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.5□□□□□ -2.01
RORAP35398 TBCAP3-201ENST00000512475 312 ntBASIC2.5□□□□□ -2.01
RORAP35398 SNORA31.18-201ENST00000517043 134 ntBASIC2.5□□□□□ -2.01
RORAP35398 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.5□□□□□ -2.01
RORAP35398 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RORAP35398 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.5□□□□□ -2.01
RORAP35398 AL132857.1-201ENST00000555180 708 ntBASIC2.5□□□□□ -2.01
RORAP35398 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.5□□□□□ -2.01
RORAP35398 MIR4446-201ENST00000578505 67 ntBASIC2.5□□□□□ -2.01
RORAP35398 AL355877.2-201ENST00000603670 358 ntBASIC2.5□□□□□ -2.01
RORAP35398 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.5□□□□□ -2.01
RORAP35398 AC079395.3-201ENST00000615161 484 ntBASIC2.5□□□□□ -2.01
RORAP35398 AC109809.1-201ENST00000619665 545 ntBASIC2.5□□□□□ -2.01
RORAP35398 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.5□□□□□ -2.01
RORAP35398 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RORAP35398 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms