Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC0.99□□□□□ -2.25
APCP25054 AP002907.1-201ENST00000606361 1430 ntBASIC0.99□□□□□ -2.25
APCP25054 RNU6-105P-201ENST00000363909 104 ntBASIC0.99□□□□□ -2.25
APCP25054 AL030996.1-201ENST00000411430 235 ntBASIC0.99□□□□□ -2.25
APCP25054 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.99□□□□□ -2.25
APCP25054 AC109583.1-201ENST00000432156 268 ntBASIC0.99□□□□□ -2.25
APCP25054 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC0.99□□□□□ -2.25
APCP25054 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
APCP25054 AC090821.2-201ENST00000523552 176 ntBASIC0.99□□□□□ -2.25
APCP25054 EEF1B2P4-201ENST00000551398 348 ntBASIC0.99□□□□□ -2.25
APCP25054 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC0.99□□□□□ -2.25
APCP25054 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC0.99□□□□□ -2.25
APCP25054 MIR3973-201ENST00000579824 107 ntBASIC0.99□□□□□ -2.25
APCP25054 AC011468.4-201ENST00000603942 409 ntBASIC0.99□□□□□ -2.25
APCP25054 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC0.99□□□□□ -2.25
APCP25054 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
APCP25054 NUP35P2-201ENST00000416748 943 ntBASIC0.99□□□□□ -2.25
APCP25054 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC0.99□□□□□ -2.25
APCP25054 TRAPPC2P9-201ENST00000434556 343 ntBASIC0.99□□□□□ -2.25
APCP25054 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC0.99□□□□□ -2.25
APCP25054 MTCO1P30-201ENST00000515244 580 ntBASIC0.99□□□□□ -2.25
APCP25054 RNU6-491P-201ENST00000516099 110 ntBASIC0.99□□□□□ -2.25
APCP25054 RNA5SP82-201ENST00000516707 92 ntBASIC0.99□□□□□ -2.25
APCP25054 AC116447.1-201ENST00000613153 453 ntBASIC0.99□□□□□ -2.25
APCP25054 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
APCP25054 ZNF33BP1-201ENST00000452497 1834 ntBASIC0.99□□□□□ -2.25
APCP25054 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
APCP25054 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC0.98□□□□□ -2.25
APCP25054 AC018630.2-202ENST00000422992 927 ntBASIC0.98□□□□□ -2.25
APCP25054 CST2P1-201ENST00000425770 87 ntBASIC0.98□□□□□ -2.25
APCP25054 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC0.98□□□□□ -2.25
APCP25054 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC0.98□□□□□ -2.25
APCP25054 AL353898.1-201ENST00000444055 238 ntBASIC0.98□□□□□ -2.25
APCP25054 AC146507.1-201ENST00000468335 354 ntBASIC0.98□□□□□ -2.25
APCP25054 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC0.98□□□□□ -2.25
APCP25054 OR4V1P-201ENST00000525394 1140 ntBASIC0.98□□□□□ -2.25
APCP25054 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
APCP25054 SMILR-201ENST00000533992 553 ntTSL 4 BASIC0.98□□□□□ -2.25
APCP25054 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC0.98□□□□□ -2.25
APCP25054 AL161713.1-201ENST00000555538 145 ntBASIC0.98□□□□□ -2.25
APCP25054 ACTR3BP3-201ENST00000565577 979 ntBASIC0.98□□□□□ -2.25
APCP25054 HSPE1P14-201ENST00000605812 302 ntBASIC0.98□□□□□ -2.25
APCP25054 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC0.98□□□□□ -2.25
APCP25054 AC021755.4-201ENST00000616620 456 ntBASIC0.98□□□□□ -2.25
APCP25054 AC139769.3-201ENST00000618383 175 ntBASIC0.98□□□□□ -2.25
APCP25054 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.98□□□□□ -2.25
APCP25054 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
APCP25054 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC0.98□□□□□ -2.25
APCP25054 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC0.98□□□□□ -2.25
APCP25054 SNORD108-201ENST00000459332 71 ntBASIC0.98□□□□□ -2.25
APCP25054 AC104629.2-201ENST00000468627 598 ntBASIC0.98□□□□□ -2.25
APCP25054 MTCO2P9-201ENST00000503214 694 ntBASIC0.98□□□□□ -2.25
APCP25054 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC0.98□□□□□ -2.25
APCP25054 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC0.98□□□□□ -2.25
APCP25054 AP003117.1-201ENST00000602771 554 ntBASIC0.98□□□□□ -2.25
APCP25054 AL109933.3-201ENST00000619095 188 ntBASIC0.98□□□□□ -2.25
APCP25054 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC0.98□□□□□ -2.25
APCP25054 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC0.98□□□□□ -2.25
APCP25054 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
APCP25054 SNORD114-23-201ENST00000363536 72 ntBASIC0.97□□□□□ -2.25
APCP25054 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC0.97□□□□□ -2.25
APCP25054 RNU4-52P-201ENST00000384209 138 ntBASIC0.97□□□□□ -2.25
APCP25054 RNA5SP354-201ENST00000391247 136 ntBASIC0.97□□□□□ -2.25
APCP25054 HSPE1P1-201ENST00000421494 318 ntBASIC0.97□□□□□ -2.25
APCP25054 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC0.97□□□□□ -2.25
APCP25054 AC004022.1-201ENST00000447766 1066 ntBASIC0.97□□□□□ -2.25
APCP25054 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC0.97□□□□□ -2.25
APCP25054 RPL7P31-201ENST00000450192 724 ntBASIC0.97□□□□□ -2.25
APCP25054 RNU6-1218P-201ENST00000458990 108 ntBASIC0.97□□□□□ -2.25
APCP25054 RPL21P39-201ENST00000463605 483 ntBASIC0.97□□□□□ -2.25
APCP25054 RPL37P6-202ENST00000464216 403 ntBASIC0.97□□□□□ -2.25
APCP25054 RPL21P93-201ENST00000480465 489 ntBASIC0.97□□□□□ -2.25
APCP25054 AC233702.1-201ENST00000482905 502 ntBASIC0.97□□□□□ -2.25
APCP25054 AC093591.1-201ENST00000491435 481 ntBASIC0.97□□□□□ -2.25
APCP25054 AC012170.1-201ENST00000495139 359 ntBASIC0.97□□□□□ -2.25
APCP25054 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC0.97□□□□□ -2.25
APCP25054 AC025857.1-201ENST00000525252 377 ntBASIC0.97□□□□□ -2.25
APCP25054 RNA5SP108-201ENST00000605921 117 ntBASIC0.97□□□□□ -2.25
APCP25054 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC0.97□□□□□ -2.25
APCP25054 AC006338.1-201ENST00000618453 749 ntBASIC0.97□□□□□ -2.25
APCP25054 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC0.97□□□□□ -2.25
APCP25054 MIR338-201ENST00000636369 67 ntBASIC0.97□□□□□ -2.25
APCP25054 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC0.97□□□□□ -2.25
APCP25054 AL354685.2-201ENST00000448218 1447 ntBASIC0.97□□□□□ -2.25
APCP25054 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.97□□□□□ -2.25
APCP25054 AL137003.2-201ENST00000606924 2538 ntBASIC0.97□□□□□ -2.25
APCP25054 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC0.97□□□□□ -2.25
APCP25054 RNU6-997P-201ENST00000384725 107 ntBASIC0.97□□□□□ -2.25
APCP25054 AL591034.1-201ENST00000407447 340 ntBASIC0.97□□□□□ -2.25
APCP25054 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC0.97□□□□□ -2.25
APCP25054 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC0.97□□□□□ -2.25
APCP25054 NDUFA5P10-201ENST00000432147 357 ntBASIC0.97□□□□□ -2.25
APCP25054 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC0.97□□□□□ -2.25
APCP25054 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC0.97□□□□□ -2.25
APCP25054 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC0.97□□□□□ -2.25
APCP25054 SNX5P1-201ENST00000505757 1041 ntBASIC0.97□□□□□ -2.25
APCP25054 RNU6-1308P-201ENST00000516817 103 ntBASIC0.97□□□□□ -2.25
APCP25054 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC0.97□□□□□ -2.25
APCP25054 AC022616.2-201ENST00000523185 300 ntBASIC0.97□□□□□ -2.25
APCP25054 AC118942.1-201ENST00000529674 1035 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms