Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
COL6A2P12110 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.4□□□□□ -1.71
COL6A2P12110 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
COL6A2P12110 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.39□□□□□ -1.71
COL6A2P12110 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
COL6A2P12110 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.39□□□□□ -1.71
COL6A2P12110 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
COL6A2P12110 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.39□□□□□ -1.71
COL6A2P12110 AL590240.1-201ENST00000334118 313 ntBASIC4.39□□□□□ -1.71
COL6A2P12110 RPL32P3-201ENST00000359025 275 ntBASIC4.39□□□□□ -1.71
COL6A2P12110 Y_RNA.146-201ENST00000363549 102 ntBASIC4.39□□□□□ -1.71
COL6A2P12110 SNORA33.2-201ENST00000365413 134 ntBASIC4.39□□□□□ -1.71
COL6A2P12110 SNORA56-201ENST00000383966 129 ntBASIC4.39□□□□□ -1.71
COL6A2P12110 RNU6-1160P-201ENST00000384546 104 ntBASIC4.39□□□□□ -1.71
COL6A2P12110 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.39□□□□□ -1.71
COL6A2P12110 RNU6-817P-201ENST00000391083 104 ntBASIC4.39□□□□□ -1.71
COL6A2P12110 AL445189.1-201ENST00000405722 338 ntBASIC4.39□□□□□ -1.71
COL6A2P12110 RNA5SP104-201ENST00000410989 118 ntBASIC4.39□□□□□ -1.71
COL6A2P12110 RNU6-370P-201ENST00000411008 104 ntBASIC4.39□□□□□ -1.71
COL6A2P12110 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.39□□□□□ -1.71
COL6A2P12110 RPS12P23-201ENST00000419579 400 ntBASIC4.39□□□□□ -1.71
COL6A2P12110 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.39□□□□□ -1.71
COL6A2P12110 RPS12P10-201ENST00000427031 377 ntBASIC4.39□□□□□ -1.71
COL6A2P12110 AL669831.1-202ENST00000428504 417 ntBASIC4.39□□□□□ -1.71
COL6A2P12110 HLA-N-201ENST00000437516 135 ntBASIC4.39□□□□□ -1.71
COL6A2P12110 RPL32P28-201ENST00000443577 397 ntBASIC4.39□□□□□ -1.71
COL6A2P12110 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.39□□□□□ -1.71
COL6A2P12110 ABCF2P2-201ENST00000450549 296 ntBASIC4.39□□□□□ -1.71
COL6A2P12110 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.39□□□□□ -1.71
COL6A2P12110 ELOCP24-201ENST00000456370 334 ntBASIC4.39□□□□□ -1.71
COL6A2P12110 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.39□□□□□ -1.71
COL6A2P12110 AL163540.1-201ENST00000485382 386 ntBASIC4.39□□□□□ -1.71
COL6A2P12110 RPS27P27-201ENST00000498779 255 ntBASIC4.39□□□□□ -1.71
COL6A2P12110 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.39□□□□□ -1.71
COL6A2P12110 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.39□□□□□ -1.71
COL6A2P12110 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.39□□□□□ -1.71
COL6A2P12110 AC104136.1-201ENST00000512969 394 ntBASIC4.39□□□□□ -1.71
COL6A2P12110 RNU2-69P-201ENST00000516061 100 ntBASIC4.39□□□□□ -1.71
COL6A2P12110 SNORA14.1-201ENST00000516113 141 ntBASIC4.39□□□□□ -1.71
COL6A2P12110 RNU6-1069P-201ENST00000516612 133 ntBASIC4.39□□□□□ -1.71
COL6A2P12110 RNU6-677P-201ENST00000516914 101 ntBASIC4.39□□□□□ -1.71
COL6A2P12110 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.39□□□□□ -1.71
COL6A2P12110 AP000827.1-201ENST00000527814 258 ntBASIC4.39□□□□□ -1.71
COL6A2P12110 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.39□□□□□ -1.71
COL6A2P12110 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC4.39□□□□□ -1.71
COL6A2P12110 MIR5690-201ENST00000583739 73 ntBASIC4.39□□□□□ -1.71
COL6A2P12110 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.39□□□□□ -1.71
COL6A2P12110 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.39□□□□□ -1.71
COL6A2P12110 AL160290.3-201ENST00000604869 165 ntBASIC4.39□□□□□ -1.71
COL6A2P12110 AC007619.2-201ENST00000605743 379 ntBASIC4.39□□□□□ -1.71
COL6A2P12110 AC022893.3-201ENST00000607665 437 ntBASIC4.39□□□□□ -1.71
COL6A2P12110 AC004825.2-201ENST00000616634 455 ntBASIC4.39□□□□□ -1.71
COL6A2P12110 MIR6891-201ENST00000618788 93 ntBASIC4.39□□□□□ -1.71
COL6A2P12110 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.39□□□□□ -1.71
COL6A2P12110 MTND5P42-201ENST00000637720 498 ntBASIC4.39□□□□□ -1.71
COL6A2P12110 OR52H1-202ENST00000641796 1061 ntBASIC4.39□□□□□ -1.71
COL6A2P12110 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
COL6A2P12110 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.39□□□□□ -1.71
COL6A2P12110 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
COL6A2P12110 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL6A2P12110 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.38□□□□□ -1.71
COL6A2P12110 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.38□□□□□ -1.71
COL6A2P12110 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL6A2P12110 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.38□□□□□ -1.71
COL6A2P12110 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL6A2P12110 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL6A2P12110 RNU6-1188P-201ENST00000363795 107 ntBASIC4.38□□□□□ -1.71
COL6A2P12110 SNORD74.4-201ENST00000364129 80 ntBASIC4.38□□□□□ -1.71
COL6A2P12110 SNORD3H-201ENST00000384486 214 ntBASIC4.38□□□□□ -1.71
COL6A2P12110 MIR513A2-201ENST00000385249 127 ntBASIC4.38□□□□□ -1.71
COL6A2P12110 RNA5SP397-201ENST00000391323 118 ntBASIC4.38□□□□□ -1.71
COL6A2P12110 RN7SKP177-201ENST00000410567 355 ntBASIC4.38□□□□□ -1.71
COL6A2P12110 RNU6-954P-201ENST00000411355 107 ntBASIC4.38□□□□□ -1.71
COL6A2P12110 RPLP0P7-201ENST00000416050 667 ntBASIC4.38□□□□□ -1.71
COL6A2P12110 RBMY1KP-201ENST00000423480 476 ntBASIC4.38□□□□□ -1.71
COL6A2P12110 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.38□□□□□ -1.71
COL6A2P12110 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.38□□□□□ -1.71
COL6A2P12110 SNAP23P1-201ENST00000433229 246 ntBASIC4.38□□□□□ -1.71
COL6A2P12110 SNRPGP5-201ENST00000456003 220 ntBASIC4.38□□□□□ -1.71
COL6A2P12110 RNU6-953P-201ENST00000459154 107 ntBASIC4.38□□□□□ -1.71
COL6A2P12110 FTH1P2-201ENST00000466086 412 ntBASIC4.38□□□□□ -1.71
COL6A2P12110 AP002812.1-201ENST00000495378 474 ntBASIC4.38□□□□□ -1.71
COL6A2P12110 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.38□□□□□ -1.71
COL6A2P12110 FTH1P9-201ENST00000513251 355 ntBASIC4.38□□□□□ -1.71
COL6A2P12110 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.38□□□□□ -1.71
COL6A2P12110 AC006270.2-201ENST00000578523 652 ntBASIC4.38□□□□□ -1.71
COL6A2P12110 AC138761.3-201ENST00000579993 334 ntBASIC4.38□□□□□ -1.71
COL6A2P12110 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.38□□□□□ -1.71
COL6A2P12110 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.38□□□□□ -1.71
COL6A2P12110 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.38□□□□□ -1.71
COL6A2P12110 AP000942.4-201ENST00000604811 241 ntBASIC4.38□□□□□ -1.71
COL6A2P12110 AL158032.1-201ENST00000605401 106 ntBASIC4.38□□□□□ -1.71
COL6A2P12110 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.38□□□□□ -1.71
COL6A2P12110 FAM157A-202ENST00000615155 405 ntBASIC4.38□□□□□ -1.71
COL6A2P12110 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC4.38□□□□□ -1.71
COL6A2P12110 ZNF519P1-201ENST00000449011 1626 ntBASIC4.38□□□□□ -1.71
COL6A2P12110 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL6A2P12110 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.38□□□□□ -1.71
COL6A2P12110 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.38□□□□□ -1.71
COL6A2P12110 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms