Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
PDGFBP01127 AC092447.10-201ENST00000620607 1652 ntBASIC3.02□□□□□ -1.93
PDGFBP01127 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.02□□□□□ -1.93
PDGFBP01127 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PDGFBP01127 RNU6-853P-201ENST00000364306 107 ntBASIC3.02□□□□□ -1.93
PDGFBP01127 RNU6-637P-201ENST00000384050 107 ntBASIC3.02□□□□□ -1.93
PDGFBP01127 SNORA36C-201ENST00000384289 132 ntBASIC3.02□□□□□ -1.93
PDGFBP01127 RNU6-1207P-201ENST00000384343 107 ntBASIC3.02□□□□□ -1.93
PDGFBP01127 AL356421.1-201ENST00000403255 413 ntBASIC3.02□□□□□ -1.93
PDGFBP01127 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PDGFBP01127 HMGB1P11-201ENST00000413899 637 ntBASIC3.02□□□□□ -1.93
PDGFBP01127 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.02□□□□□ -1.93
PDGFBP01127 RPL31P12-201ENST00000422587 358 ntBASIC3.02□□□□□ -1.93
PDGFBP01127 ARL5AP4-201ENST00000430731 512 ntBASIC3.02□□□□□ -1.93
PDGFBP01127 RPL7P34-201ENST00000433316 712 ntBASIC3.02□□□□□ -1.93
PDGFBP01127 YWHAZP7-201ENST00000436906 631 ntBASIC3.02□□□□□ -1.93
PDGFBP01127 MRPS31P2-201ENST00000451581 518 ntBASIC3.02□□□□□ -1.93
PDGFBP01127 AL049874.1-201ENST00000489560 388 ntBASIC3.02□□□□□ -1.93
PDGFBP01127 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.02□□□□□ -1.93
PDGFBP01127 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.02□□□□□ -1.93
PDGFBP01127 RNA5SP216-201ENST00000516111 123 ntBASIC3.02□□□□□ -1.93
PDGFBP01127 SNORA31.21-201ENST00000517180 77 ntBASIC3.02□□□□□ -1.93
PDGFBP01127 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.02□□□□□ -1.93
PDGFBP01127 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.02□□□□□ -1.93
PDGFBP01127 OR4H12P-201ENST00000556269 907 ntBASIC3.02□□□□□ -1.93
PDGFBP01127 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.02□□□□□ -1.93
PDGFBP01127 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.02□□□□□ -1.93
PDGFBP01127 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.02□□□□□ -1.93
PDGFBP01127 MIR4738-201ENST00000579134 87 ntBASIC3.02□□□□□ -1.93
PDGFBP01127 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.02□□□□□ -1.93
PDGFBP01127 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.02□□□□□ -1.93
PDGFBP01127 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.02□□□□□ -1.93
PDGFBP01127 RNU6-88P-201ENST00000606801 100 ntBASIC3.02□□□□□ -1.93
PDGFBP01127 AC024560.3-201ENST00000608482 349 ntBASIC3.02□□□□□ -1.93
PDGFBP01127 AC013476.2-201ENST00000614456 459 ntBASIC3.02□□□□□ -1.93
PDGFBP01127 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.02□□□□□ -1.93
PDGFBP01127 AC079416.3-201ENST00000624479 549 ntBASIC3.02□□□□□ -1.93
PDGFBP01127 AC008669.1-201ENST00000565823 2178 ntBASIC3.02□□□□□ -1.93
PDGFBP01127 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.02□□□□□ -1.93
PDGFBP01127 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PDGFBP01127 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.02□□□□□ -1.93
PDGFBP01127 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
PDGFBP01127 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PDGFBP01127 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
PDGFBP01127 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PDGFBP01127 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
PDGFBP01127 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PDGFBP01127 AC073325.2-201ENST00000339545 159 ntBASIC3.01□□□□□ -1.93
PDGFBP01127 RNU6-433P-201ENST00000363216 104 ntBASIC3.01□□□□□ -1.93
PDGFBP01127 RNU6-744P-201ENST00000365557 107 ntBASIC3.01□□□□□ -1.93
PDGFBP01127 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
PDGFBP01127 RNU6-1316P-201ENST00000384242 108 ntBASIC3.01□□□□□ -1.93
PDGFBP01127 RNU6-198P-201ENST00000384258 104 ntBASIC3.01□□□□□ -1.93
PDGFBP01127 AC119751.3-201ENST00000399720 670 ntBASIC3.01□□□□□ -1.93
PDGFBP01127 AC110754.1-201ENST00000399740 601 ntBASIC3.01□□□□□ -1.93
PDGFBP01127 AL136116.1-201ENST00000403591 381 ntBASIC3.01□□□□□ -1.93
PDGFBP01127 MTND1P21-201ENST00000412991 285 ntBASIC3.01□□□□□ -1.93
PDGFBP01127 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.01□□□□□ -1.93
PDGFBP01127 AC008850.1-201ENST00000427546 362 ntBASIC3.01□□□□□ -1.93
PDGFBP01127 OR4K11P-201ENST00000431829 904 ntBASIC3.01□□□□□ -1.93
PDGFBP01127 CETN4P-201ENST00000432407 469 ntBASIC3.01□□□□□ -1.93
PDGFBP01127 AL512844.2-201ENST00000433990 593 ntBASIC3.01□□□□□ -1.93
PDGFBP01127 UBE2D3P1-201ENST00000436669 444 ntBASIC3.01□□□□□ -1.93
PDGFBP01127 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
PDGFBP01127 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.01□□□□□ -1.93
PDGFBP01127 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.01□□□□□ -1.93
PDGFBP01127 AC006539.3-201ENST00000454258 129 ntBASIC3.01□□□□□ -1.93
PDGFBP01127 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PDGFBP01127 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.01□□□□□ -1.93
PDGFBP01127 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.01□□□□□ -1.93
PDGFBP01127 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.01□□□□□ -1.93
PDGFBP01127 AC008549.1-201ENST00000512900 643 ntBASIC3.01□□□□□ -1.93
PDGFBP01127 RN7SKP282-201ENST00000516824 299 ntBASIC3.01□□□□□ -1.93
PDGFBP01127 RNU6-840P-201ENST00000517275 65 ntBASIC3.01□□□□□ -1.93
PDGFBP01127 AC109446.2-201ENST00000567872 497 ntBASIC3.01□□□□□ -1.93
PDGFBP01127 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
PDGFBP01127 U73023.1-201ENST00000603134 700 ntBASIC3.01□□□□□ -1.93
PDGFBP01127 AP000811.1-201ENST00000603803 651 ntBASIC3.01□□□□□ -1.93
PDGFBP01127 AL357094.1-201ENST00000603845 844 ntBASIC3.01□□□□□ -1.93
PDGFBP01127 AC068313.1-201ENST00000604028 1008 ntBASIC3.01□□□□□ -1.93
PDGFBP01127 AC013553.2-201ENST00000604244 589 ntBASIC3.01□□□□□ -1.93
PDGFBP01127 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.01□□□□□ -1.93
PDGFBP01127 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.01□□□□□ -1.93
PDGFBP01127 AC073308.1-201ENST00000623696 305 ntBASIC3.01□□□□□ -1.93
PDGFBP01127 AC068880.5-201ENST00000624331 290 ntBASIC3.01□□□□□ -1.93
PDGFBP01127 AC064859.1-201ENST00000624741 174 ntBASIC3.01□□□□□ -1.93
PDGFBP01127 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
PDGFBP01127 DDX10P1-201ENST00000448545 1933 ntBASIC3.01□□□□□ -1.93
PDGFBP01127 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PDGFBP01127 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
PDGFBP01127 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
PDGFBP01127 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
PDGFBP01127 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3□□□□□ -1.93
PDGFBP01127 AL049641.1-201ENST00000441055 1948 ntBASIC3□□□□□ -1.93
PDGFBP01127 U8.2-201ENST00000363156 134 ntBASIC3□□□□□ -1.93
PDGFBP01127 Y_RNA.302-201ENST00000364997 102 ntBASIC3□□□□□ -1.93
PDGFBP01127 RNU6-1035P-201ENST00000384477 107 ntBASIC3□□□□□ -1.93
PDGFBP01127 AL360182.1-201ENST00000397433 468 ntBASIC3□□□□□ -1.93
PDGFBP01127 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3□□□□□ -1.93
PDGFBP01127 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms