Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
PCF11O94913 SEM1P1-201ENST00000506694 209 ntBASIC2.44□□□□□ -2.02
PCF11O94913 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.44□□□□□ -2.02
PCF11O94913 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC2.44□□□□□ -2.02
PCF11O94913 OR4K8P-201ENST00000578842 1048 ntBASIC2.44□□□□□ -2.02
PCF11O94913 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.44□□□□□ -2.02
PCF11O94913 HSPE1P14-201ENST00000605812 302 ntBASIC2.44□□□□□ -2.02
PCF11O94913 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
PCF11O94913 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC2.44□□□□□ -2.02
PCF11O94913 CDC27P3-201ENST00000635418 1910 ntBASIC2.43□□□□□ -2.02
PCF11O94913 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
PCF11O94913 RBBP8P1-201ENST00000449447 1844 ntBASIC2.43□□□□□ -2.02
PCF11O94913 RNA5SP393-201ENST00000363423 117 ntBASIC2.43□□□□□ -2.02
PCF11O94913 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
PCF11O94913 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.43□□□□□ -2.02
PCF11O94913 TRIM60P13-201ENST00000432350 1283 ntBASIC2.43□□□□□ -2.02
PCF11O94913 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC2.43□□□□□ -2.02
PCF11O94913 UBBP3-201ENST00000445497 241 ntBASIC2.43□□□□□ -2.02
PCF11O94913 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.43□□□□□ -2.02
PCF11O94913 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.43□□□□□ -2.02
PCF11O94913 C1DP5-201ENST00000525775 383 ntBASIC2.43□□□□□ -2.02
PCF11O94913 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.43□□□□□ -2.02
PCF11O94913 AC087481.2-201ENST00000565492 330 ntBASIC2.43□□□□□ -2.02
PCF11O94913 AC092474.3-201ENST00000603022 568 ntBASIC2.43□□□□□ -2.02
PCF11O94913 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
PCF11O94913 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.43□□□□□ -2.02
PCF11O94913 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
PCF11O94913 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.42□□□□□ -2.02
PCF11O94913 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.42□□□□□ -2.02
PCF11O94913 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
PCF11O94913 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
PCF11O94913 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
PCF11O94913 RNU6-819P-201ENST00000364116 107 ntBASIC2.42□□□□□ -2.02
PCF11O94913 MIR421-201ENST00000365696 85 ntBASIC2.42□□□□□ -2.02
PCF11O94913 DSTNP4-201ENST00000399472 474 ntBASIC2.42□□□□□ -2.02
PCF11O94913 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.42□□□□□ -2.02
PCF11O94913 AC096632.1-201ENST00000427395 310 ntBASIC2.42□□□□□ -2.02
PCF11O94913 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC2.42□□□□□ -2.02
PCF11O94913 AC015908.1-201ENST00000478739 476 ntBASIC2.42□□□□□ -2.02
PCF11O94913 MTCO3P44-201ENST00000510977 541 ntBASIC2.42□□□□□ -2.02
PCF11O94913 AC092470.1-201ENST00000546187 132 ntBASIC2.42□□□□□ -2.02
PCF11O94913 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.42□□□□□ -2.02
PCF11O94913 AL353770.2-201ENST00000620024 78 ntBASIC2.42□□□□□ -2.02
PCF11O94913 FO624990.1-201ENST00000636373 85 ntBASIC2.42□□□□□ -2.02
PCF11O94913 AC068620.4-201ENST00000636730 1182 ntBASIC2.42□□□□□ -2.02
PCF11O94913 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.42□□□□□ -2.02
PCF11O94913 AC119674.1-220ENST00000641502 1048 ntBASIC2.42□□□□□ -2.02
PCF11O94913 RPL23AP29-201ENST00000397284 453 ntBASIC2.41□□□□□ -2.02
PCF11O94913 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.41□□□□□ -2.02
PCF11O94913 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.41□□□□□ -2.02
PCF11O94913 AC004865.1-201ENST00000442276 1003 ntBASIC2.41□□□□□ -2.02
PCF11O94913 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC2.41□□□□□ -2.02
PCF11O94913 RPPH1-2P-201ENST00000516688 293 ntBASIC2.41□□□□□ -2.02
PCF11O94913 RNA5SP364-201ENST00000516938 78 ntBASIC2.41□□□□□ -2.02
PCF11O94913 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.41□□□□□ -2.02
PCF11O94913 BX649567.1-201ENST00000642071 1134 ntBASIC2.41□□□□□ -2.02
PCF11O94913 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
PCF11O94913 RNA5SP258-201ENST00000362750 119 ntBASIC2.4□□□□□ -2.02
PCF11O94913 SUMO1P4-201ENST00000429430 302 ntBASIC2.4□□□□□ -2.02
PCF11O94913 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.4□□□□□ -2.02
PCF11O94913 AC008885.2-201ENST00000509506 930 ntBASIC2.4□□□□□ -2.02
PCF11O94913 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC2.4□□□□□ -2.02
PCF11O94913 AC074029.2-201ENST00000551045 634 ntBASIC2.4□□□□□ -2.02
PCF11O94913 AL669831.4-202ENST00000590817 238 ntBASIC2.4□□□□□ -2.02
PCF11O94913 XIAPP1-201ENST00000603162 600 ntBASIC2.4□□□□□ -2.02
PCF11O94913 AC135178.6-201ENST00000605314 398 ntBASIC2.4□□□□□ -2.02
PCF11O94913 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.02
PCF11O94913 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.4□□□□□ -2.02
PCF11O94913 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.02
PCF11O94913 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
PCF11O94913 RNU6-263P-201ENST00000363811 107 ntBASIC2.4□□□□□ -2.03
PCF11O94913 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
PCF11O94913 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.4□□□□□ -2.03
PCF11O94913 RPS4XP3-201ENST00000398541 413 ntBASIC2.4□□□□□ -2.03
PCF11O94913 BX682237.1-201ENST00000415016 335 ntBASIC2.4□□□□□ -2.03
PCF11O94913 TMEM167AP1-201ENST00000423409 219 ntBASIC2.4□□□□□ -2.03
PCF11O94913 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.4□□□□□ -2.03
PCF11O94913 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.4□□□□□ -2.03
PCF11O94913 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC2.4□□□□□ -2.03
PCF11O94913 NAP1L1P3-201ENST00000462291 880 ntBASIC2.4□□□□□ -2.03
PCF11O94913 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.4□□□□□ -2.03
PCF11O94913 RPL37P25-201ENST00000507308 276 ntBASIC2.4□□□□□ -2.03
PCF11O94913 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.4□□□□□ -2.03
PCF11O94913 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.4□□□□□ -2.03
PCF11O94913 MIR4446-201ENST00000578505 67 ntBASIC2.4□□□□□ -2.03
PCF11O94913 AL360181.4-201ENST00000621752 134 ntBASIC2.4□□□□□ -2.03
PCF11O94913 AC097372.4-201ENST00000625025 466 ntBASIC2.4□□□□□ -2.03
PCF11O94913 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.4□□□□□ -2.03
PCF11O94913 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.4□□□□□ -2.03
PCF11O94913 MTND4P8-201ENST00000514997 1362 ntBASIC2.39□□□□□ -2.03
PCF11O94913 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
PCF11O94913 ZNF519P1-201ENST00000449011 1626 ntBASIC2.39□□□□□ -2.03
PCF11O94913 RNU1-22P-201ENST00000363334 158 ntBASIC2.39□□□□□ -2.03
PCF11O94913 Y_RNA.393-201ENST00000383936 102 ntBASIC2.39□□□□□ -2.03
PCF11O94913 SSXP10-201ENST00000402595 565 ntBASIC2.39□□□□□ -2.03
PCF11O94913 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.39□□□□□ -2.03
PCF11O94913 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.39□□□□□ -2.03
PCF11O94913 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.39□□□□□ -2.03
PCF11O94913 RNU1-92P-201ENST00000517017 135 ntBASIC2.39□□□□□ -2.03
PCF11O94913 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms