Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 SNORA46.1-201ENST00000391069 153 ntBASIC5.96□□□□□ -1.46
RNF40O75150 AL133388.1-201ENST00000404509 287 ntBASIC5.96□□□□□ -1.46
RNF40O75150 RNU2-52P-201ENST00000410680 190 ntBASIC5.96□□□□□ -1.46
RNF40O75150 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC5.96□□□□□ -1.46
RNF40O75150 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.96□□□□□ -1.46
RNF40O75150 HSPD1P21-201ENST00000436541 245 ntBASIC5.96□□□□□ -1.46
RNF40O75150 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC5.96□□□□□ -1.46
RNF40O75150 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.96□□□□□ -1.46
RNF40O75150 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.96□□□□□ -1.46
RNF40O75150 AL354710.1-201ENST00000453641 246 ntBASIC5.96□□□□□ -1.46
RNF40O75150 Y_RNA.641-201ENST00000459414 105 ntBASIC5.96□□□□□ -1.46
RNF40O75150 TOMM22P6-201ENST00000465035 409 ntBASIC5.96□□□□□ -1.46
RNF40O75150 RPS17P15-201ENST00000475609 349 ntBASIC5.96□□□□□ -1.46
RNF40O75150 RPL26P26-201ENST00000480251 434 ntBASIC5.96□□□□□ -1.46
RNF40O75150 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.96□□□□□ -1.46
RNF40O75150 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC5.96□□□□□ -1.46
RNF40O75150 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.96□□□□□ -1.46
RNF40O75150 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.96□□□□□ -1.46
RNF40O75150 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.96□□□□□ -1.46
RNF40O75150 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.96□□□□□ -1.46
RNF40O75150 AC060766.3-201ENST00000591442 263 ntBASIC5.96□□□□□ -1.46
RNF40O75150 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RNF40O75150 Y_RNA.778-201ENST00000620203 90 ntBASIC5.96□□□□□ -1.46
RNF40O75150 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RNF40O75150 AC006206.1-201ENST00000544842 3387 ntBASIC5.96□□□□□ -1.46
RNF40O75150 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.96□□□□□ -1.46
RNF40O75150 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
RNF40O75150 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
RNF40O75150 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.95□□□□□ -1.46
RNF40O75150 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
RNF40O75150 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC5.95□□□□□ -1.46
RNF40O75150 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RNF40O75150 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
RNF40O75150 RNU6-926P-201ENST00000384075 107 ntBASIC5.95□□□□□ -1.46
RNF40O75150 RNU6-171P-201ENST00000384354 107 ntBASIC5.95□□□□□ -1.46
RNF40O75150 RNU6-21P-201ENST00000384710 107 ntBASIC5.95□□□□□ -1.46
RNF40O75150 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
RNF40O75150 MIR937-201ENST00000401271 86 ntBASIC5.95□□□□□ -1.46
RNF40O75150 RNU5A-5P-201ENST00000411054 116 ntBASIC5.95□□□□□ -1.46
RNF40O75150 AL592148.1-201ENST00000413568 445 ntBASIC5.95□□□□□ -1.46
RNF40O75150 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.95□□□□□ -1.46
RNF40O75150 AL391219.1-201ENST00000422570 483 ntBASIC5.95□□□□□ -1.46
RNF40O75150 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.95□□□□□ -1.46
RNF40O75150 AL592045.1-201ENST00000429867 352 ntBASIC5.95□□□□□ -1.46
RNF40O75150 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.95□□□□□ -1.46
RNF40O75150 Z82188.1-201ENST00000436709 154 ntBASIC5.95□□□□□ -1.46
RNF40O75150 RPL12P18-201ENST00000437175 325 ntBASIC5.95□□□□□ -1.46
RNF40O75150 LINC02210-201ENST00000444561 288 ntBASIC5.95□□□□□ -1.46
RNF40O75150 AC022795.1-201ENST00000473808 480 ntBASIC5.95□□□□□ -1.46
RNF40O75150 RPL23AP45-201ENST00000476406 468 ntBASIC5.95□□□□□ -1.46
RNF40O75150 COX6B1P2-201ENST00000489624 230 ntBASIC5.95□□□□□ -1.46
RNF40O75150 APOOP4-201ENST00000513530 597 ntBASIC5.95□□□□□ -1.46
RNF40O75150 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.95□□□□□ -1.46
RNF40O75150 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.95□□□□□ -1.46
RNF40O75150 RNU6-971P-201ENST00000516920 106 ntBASIC5.95□□□□□ -1.46
RNF40O75150 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC5.95□□□□□ -1.46
RNF40O75150 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.95□□□□□ -1.46
RNF40O75150 MIR4675-201ENST00000577898 77 ntBASIC5.95□□□□□ -1.46
RNF40O75150 AC005046.1-201ENST00000608515 625 ntBASIC5.95□□□□□ -1.46
RNF40O75150 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC5.95□□□□□ -1.46
RNF40O75150 MIR4275-201ENST00000636486 87 ntBASIC5.95□□□□□ -1.46
RNF40O75150 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
RNF40O75150 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RNF40O75150 THAP12P5-201ENST00000405864 2275 ntBASIC5.95□□□□□ -1.46
RNF40O75150 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
RNF40O75150 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
RNF40O75150 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
RNF40O75150 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RNF40O75150 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
RNF40O75150 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.94□□□□□ -1.46
RNF40O75150 C4BPAP1-201ENST00000415474 1893 ntBASIC5.94□□□□□ -1.46
RNF40O75150 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.94□□□□□ -1.46
RNF40O75150 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
RNF40O75150 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
RNF40O75150 Y_RNA.23-201ENST00000362496 106 ntBASIC5.94□□□□□ -1.46
RNF40O75150 RNU1-19P-201ENST00000363306 165 ntBASIC5.94□□□□□ -1.46
RNF40O75150 RNU6-1255P-201ENST00000363434 112 ntBASIC5.94□□□□□ -1.46
RNF40O75150 RNU6-312P-201ENST00000364629 107 ntBASIC5.94□□□□□ -1.46
RNF40O75150 Y_RNA.570-201ENST00000384750 101 ntBASIC5.94□□□□□ -1.46
RNF40O75150 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.94□□□□□ -1.46
RNF40O75150 AL451062.2-201ENST00000427515 271 ntBASIC5.94□□□□□ -1.46
RNF40O75150 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.94□□□□□ -1.46
RNF40O75150 FHP1-201ENST00000442741 703 ntBASIC5.94□□□□□ -1.46
RNF40O75150 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.94□□□□□ -1.46
RNF40O75150 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC5.94□□□□□ -1.46
RNF40O75150 AL137159.1-201ENST00000452808 512 ntBASIC5.94□□□□□ -1.46
RNF40O75150 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.94□□□□□ -1.46
RNF40O75150 RN7SL610P-201ENST00000463845 291 ntBASIC5.94□□□□□ -1.46
RNF40O75150 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC5.94□□□□□ -1.46
RNF40O75150 ENPP7P11-201ENST00000505915 627 ntBASIC5.94□□□□□ -1.46
RNF40O75150 HMGB3P16-201ENST00000508037 287 ntBASIC5.94□□□□□ -1.46
RNF40O75150 HIGD1AP3-201ENST00000515857 278 ntBASIC5.94□□□□□ -1.46
RNF40O75150 AL157871.3-201ENST00000557231 293 ntBASIC5.94□□□□□ -1.46
RNF40O75150 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.94□□□□□ -1.46
RNF40O75150 MIR1273C-201ENST00000578669 77 ntBASIC5.94□□□□□ -1.46
RNF40O75150 AC023575.1-201ENST00000580510 358 ntBASIC5.94□□□□□ -1.46
RNF40O75150 MIR4260-201ENST00000583107 67 ntBASIC5.94□□□□□ -1.46
RNF40O75150 AL133393.1-201ENST00000603277 287 ntBASIC5.94□□□□□ -1.46
RNF40O75150 MIR6730-201ENST00000622213 67 ntBASIC5.94□□□□□ -1.46
RNF40O75150 AC233981.2-201ENST00000611524 1614 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms