Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 LTV1P1-201ENST00000510683 1237 ntBASIC1.6□□□□□ -2.15
PDE6DO43924 SAP18P1-201ENST00000512058 390 ntBASIC1.6□□□□□ -2.15
PDE6DO43924 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.6□□□□□ -2.15
PDE6DO43924 AC017037.2-201ENST00000513850 890 ntBASIC1.6□□□□□ -2.15
PDE6DO43924 SCARNA16.3-201ENST00000516595 184 ntBASIC1.6□□□□□ -2.15
PDE6DO43924 UBTFL10-201ENST00000528532 562 ntBASIC1.6□□□□□ -2.15
PDE6DO43924 CBX3P7-201ENST00000532876 502 ntBASIC1.6□□□□□ -2.15
PDE6DO43924 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.6□□□□□ -2.15
PDE6DO43924 AL359212.1-201ENST00000556608 614 ntBASIC1.6□□□□□ -2.15
PDE6DO43924 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.6□□□□□ -2.15
PDE6DO43924 MIR3122-201ENST00000577243 73 ntBASIC1.6□□□□□ -2.15
PDE6DO43924 MIR4299-201ENST00000577899 72 ntBASIC1.6□□□□□ -2.15
PDE6DO43924 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC1.6□□□□□ -2.15
PDE6DO43924 AL590099.1-201ENST00000615276 138 ntBASIC1.6□□□□□ -2.15
PDE6DO43924 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.6□□□□□ -2.15
PDE6DO43924 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
PDE6DO43924 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
PDE6DO43924 AC009487.4-201ENST00000624969 3585 ntBASIC1.6□□□□□ -2.15
PDE6DO43924 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
PDE6DO43924 AP006437.1-201ENST00000641440 3685 ntBASIC1.6□□□□□ -2.15
PDE6DO43924 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.59□□□□□ -2.15
PDE6DO43924 RNU1-91P-201ENST00000364746 163 ntBASIC1.59□□□□□ -2.15
PDE6DO43924 RNU2-33P-201ENST00000410344 192 ntBASIC1.59□□□□□ -2.15
PDE6DO43924 RNU2-52P-201ENST00000410680 190 ntBASIC1.59□□□□□ -2.15
PDE6DO43924 RNA5SP489-201ENST00000410986 109 ntBASIC1.59□□□□□ -2.15
PDE6DO43924 AL592310.1-201ENST00000414330 671 ntBASIC1.59□□□□□ -2.15
PDE6DO43924 AC008173.1-201ENST00000418901 264 ntBASIC1.59□□□□□ -2.15
PDE6DO43924 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.59□□□□□ -2.15
PDE6DO43924 SFR1P2-201ENST00000421841 730 ntBASIC1.59□□□□□ -2.15
PDE6DO43924 MTCO3P1-205ENST00000422088 832 ntBASIC1.59□□□□□ -2.15
PDE6DO43924 RPS3AP44-201ENST00000425466 790 ntBASIC1.59□□□□□ -2.15
PDE6DO43924 AC007919.1-201ENST00000429380 217 ntBASIC1.59□□□□□ -2.15
PDE6DO43924 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.59□□□□□ -2.15
PDE6DO43924 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.59□□□□□ -2.15
PDE6DO43924 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC1.59□□□□□ -2.15
PDE6DO43924 RPL21P134-201ENST00000453468 483 ntBASIC1.59□□□□□ -2.15
PDE6DO43924 BX510359.1-201ENST00000456973 237 ntBASIC1.59□□□□□ -2.15
PDE6DO43924 AC107032.1-201ENST00000485945 480 ntBASIC1.59□□□□□ -2.15
PDE6DO43924 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.59□□□□□ -2.15
PDE6DO43924 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.59□□□□□ -2.15
PDE6DO43924 AC026801.2-201ENST00000515352 425 ntBASIC1.59□□□□□ -2.15
PDE6DO43924 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.59□□□□□ -2.15
PDE6DO43924 FAM92A1P1-201ENST00000528023 890 ntBASIC1.59□□□□□ -2.15
PDE6DO43924 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC1.59□□□□□ -2.15
PDE6DO43924 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC1.59□□□□□ -2.15
PDE6DO43924 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.59□□□□□ -2.15
PDE6DO43924 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC1.59□□□□□ -2.15
PDE6DO43924 AC105245.1-201ENST00000581934 244 ntBASIC1.59□□□□□ -2.15
PDE6DO43924 AC005034.5-201ENST00000604219 466 ntBASIC1.59□□□□□ -2.15
PDE6DO43924 AC068276.1-201ENST00000605793 379 ntBASIC1.59□□□□□ -2.15
PDE6DO43924 MIR6748-201ENST00000610433 71 ntBASIC1.59□□□□□ -2.15
PDE6DO43924 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.15
PDE6DO43924 AC104763.3-201ENST00000613765 618 ntBASIC1.59□□□□□ -2.15
PDE6DO43924 U4atac.1-201ENST00000618345 95 ntBASIC1.59□□□□□ -2.15
PDE6DO43924 AP002791.1-201ENST00000623291 381 ntBASIC1.59□□□□□ -2.15
PDE6DO43924 AC244517.12-201ENST00000623581 663 ntBASIC1.59□□□□□ -2.15
PDE6DO43924 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC1.59□□□□□ -2.15
PDE6DO43924 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC1.59□□□□□ -2.15
PDE6DO43924 AL590396.4-201ENST00000636779 956 ntBASIC1.59□□□□□ -2.15
PDE6DO43924 U6.101-201ENST00000637707 76 ntBASIC1.59□□□□□ -2.15
PDE6DO43924 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC1.58□□□□□ -2.16
PDE6DO43924 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
PDE6DO43924 RPL23AP29-201ENST00000397284 453 ntBASIC1.58□□□□□ -2.16
PDE6DO43924 SNORD56-201ENST00000413522 71 ntBASIC1.58□□□□□ -2.16
PDE6DO43924 BPY2DP-201ENST00000422208 265 ntBASIC1.58□□□□□ -2.16
PDE6DO43924 AL445685.2-201ENST00000422551 342 ntBASIC1.58□□□□□ -2.16
PDE6DO43924 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.58□□□□□ -2.16
PDE6DO43924 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.58□□□□□ -2.16
PDE6DO43924 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.58□□□□□ -2.16
PDE6DO43924 AL590233.1-201ENST00000430017 456 ntBASIC1.58□□□□□ -2.16
PDE6DO43924 AC091390.1-201ENST00000433904 331 ntBASIC1.58□□□□□ -2.16
PDE6DO43924 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.58□□□□□ -2.16
PDE6DO43924 AC044797.1-201ENST00000445744 679 ntBASIC1.58□□□□□ -2.16
PDE6DO43924 RPL23AP3-201ENST00000453844 468 ntBASIC1.58□□□□□ -2.16
PDE6DO43924 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.58□□□□□ -2.16
PDE6DO43924 HMGB1P36-201ENST00000487709 576 ntBASIC1.58□□□□□ -2.16
PDE6DO43924 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.58□□□□□ -2.16
PDE6DO43924 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.58□□□□□ -2.16
PDE6DO43924 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.58□□□□□ -2.16
PDE6DO43924 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
PDE6DO43924 AC067805.1-201ENST00000559344 470 ntBASIC1.58□□□□□ -2.16
PDE6DO43924 AC007151.1-201ENST00000572774 483 ntBASIC1.58□□□□□ -2.16
PDE6DO43924 MIR3200-201ENST00000580767 85 ntBASIC1.58□□□□□ -2.16
PDE6DO43924 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.58□□□□□ -2.16
PDE6DO43924 AL391813.1-201ENST00000603098 260 ntBASIC1.58□□□□□ -2.16
PDE6DO43924 AC136601.2-201ENST00000604356 474 ntBASIC1.58□□□□□ -2.16
PDE6DO43924 AC091946.2-201ENST00000606105 291 ntBASIC1.58□□□□□ -2.16
PDE6DO43924 AC016911.1-201ENST00000613297 452 ntBASIC1.58□□□□□ -2.16
PDE6DO43924 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.58□□□□□ -2.16
PDE6DO43924 AC104307.1-201ENST00000616142 196 ntBASIC1.58□□□□□ -2.16
PDE6DO43924 PISRT1-201ENST00000626175 531 ntBASIC1.58□□□□□ -2.16
PDE6DO43924 MTND1P37-201ENST00000636562 264 ntBASIC1.58□□□□□ -2.16
PDE6DO43924 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC1.57□□□□□ -2.16
PDE6DO43924 AC083799.1-201ENST00000366451 910 ntBASIC1.57□□□□□ -2.16
PDE6DO43924 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.57□□□□□ -2.16
PDE6DO43924 MIR196B-201ENST00000384852 84 ntBASIC1.57□□□□□ -2.16
PDE6DO43924 U6atac.2-201ENST00000408644 118 ntBASIC1.57□□□□□ -2.16
PDE6DO43924 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
PDE6DO43924 OFD1P11Y-201ENST00000418213 1177 ntBASIC1.57□□□□□ -2.16
PDE6DO43924 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms