Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 Y_RNA.422-201ENST00000384054 114 ntBASIC4.35□□□□□ -1.71
FOXN1O15353 RNU6-456P-201ENST00000384493 107 ntBASIC4.35□□□□□ -1.71
FOXN1O15353 Y_RNA.579-201ENST00000390939 94 ntBASIC4.35□□□□□ -1.71
FOXN1O15353 RNU6-1158P-201ENST00000391167 107 ntBASIC4.35□□□□□ -1.71
FOXN1O15353 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC4.35□□□□□ -1.71
FOXN1O15353 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.35□□□□□ -1.71
FOXN1O15353 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.35□□□□□ -1.71
FOXN1O15353 RSU1P2-202ENST00000437884 485 ntBASIC4.35□□□□□ -1.71
FOXN1O15353 MTND6P18-201ENST00000439477 513 ntBASIC4.35□□□□□ -1.71
FOXN1O15353 AC130509.1-201ENST00000464158 433 ntBASIC4.35□□□□□ -1.71
FOXN1O15353 TRBV12-2-201ENST00000489763 344 ntBASIC4.35□□□□□ -1.71
FOXN1O15353 AC034159.1-201ENST00000513885 583 ntBASIC4.35□□□□□ -1.71
FOXN1O15353 Vault.3-201ENST00000516676 95 ntBASIC4.35□□□□□ -1.71
FOXN1O15353 BTF3P12-201ENST00000519620 469 ntBASIC4.35□□□□□ -1.71
FOXN1O15353 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.35□□□□□ -1.71
FOXN1O15353 SCOCP1-201ENST00000554676 349 ntBASIC4.35□□□□□ -1.71
FOXN1O15353 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.35□□□□□ -1.71
FOXN1O15353 MIR4276-201ENST00000584832 70 ntBASIC4.35□□□□□ -1.71
FOXN1O15353 AC136443.5-201ENST00000603741 370 ntBASIC4.35□□□□□ -1.71
FOXN1O15353 AC124303.1-201ENST00000605703 360 ntBASIC4.35□□□□□ -1.71
FOXN1O15353 BRDTP1-201ENST00000605735 677 ntBASIC4.35□□□□□ -1.71
FOXN1O15353 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.35□□□□□ -1.71
FOXN1O15353 NUP58P1-201ENST00000502546 1738 ntBASIC4.35□□□□□ -1.71
FOXN1O15353 AL118496.1-201ENST00000440201 1812 ntBASIC4.35□□□□□ -1.71
FOXN1O15353 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.34□□□□□ -1.71
FOXN1O15353 AC006504.1-201ENST00000562493 3666 ntBASIC4.34□□□□□ -1.71
FOXN1O15353 Y_RNA.145-201ENST00000363527 102 ntBASIC4.34□□□□□ -1.71
FOXN1O15353 Y_RNA.146-201ENST00000363549 102 ntBASIC4.34□□□□□ -1.71
FOXN1O15353 RNU6-463P-201ENST00000384340 107 ntBASIC4.34□□□□□ -1.71
FOXN1O15353 HMGN2P8-201ENST00000391458 268 ntBASIC4.34□□□□□ -1.71
FOXN1O15353 RPL23AP32-201ENST00000395315 459 ntBASIC4.34□□□□□ -1.71
FOXN1O15353 RNU2-28P-201ENST00000410457 189 ntBASIC4.34□□□□□ -1.71
FOXN1O15353 MTND3P8-201ENST00000412909 339 ntBASIC4.34□□□□□ -1.71
FOXN1O15353 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.34□□□□□ -1.71
FOXN1O15353 ELOCP4-201ENST00000420090 333 ntBASIC4.34□□□□□ -1.71
FOXN1O15353 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.34□□□□□ -1.71
FOXN1O15353 AC018630.2-202ENST00000422992 927 ntBASIC4.34□□□□□ -1.71
FOXN1O15353 ATP5JP1-201ENST00000431631 322 ntBASIC4.34□□□□□ -1.71
FOXN1O15353 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
FOXN1O15353 AC108059.2-201ENST00000434626 151 ntBASIC4.34□□□□□ -1.71
FOXN1O15353 BNIP3P2-201ENST00000441221 577 ntBASIC4.34□□□□□ -1.71
FOXN1O15353 AC016691.1-201ENST00000441321 413 ntBASIC4.34□□□□□ -1.71
FOXN1O15353 RNU7-136P-201ENST00000458819 69 ntBASIC4.34□□□□□ -1.71
FOXN1O15353 RNU6-261P-201ENST00000459506 102 ntBASIC4.34□□□□□ -1.71
FOXN1O15353 SNORD19B-201ENST00000459623 84 ntBASIC4.34□□□□□ -1.71
FOXN1O15353 RPL27AP5-201ENST00000469428 449 ntBASIC4.34□□□□□ -1.71
FOXN1O15353 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.34□□□□□ -1.71
FOXN1O15353 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.34□□□□□ -1.71
FOXN1O15353 RNU6-1046P-201ENST00000516538 107 ntBASIC4.34□□□□□ -1.71
FOXN1O15353 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.34□□□□□ -1.71
FOXN1O15353 PSMA2P1-201ENST00000526365 646 ntBASIC4.34□□□□□ -1.71
FOXN1O15353 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.34□□□□□ -1.71
FOXN1O15353 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.34□□□□□ -1.71
FOXN1O15353 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.34□□□□□ -1.71
FOXN1O15353 AC087241.2-201ENST00000535801 324 ntBASIC4.34□□□□□ -1.71
FOXN1O15353 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.34□□□□□ -1.71
FOXN1O15353 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.34□□□□□ -1.71
FOXN1O15353 AC010525.2-201ENST00000590920 195 ntBASIC4.34□□□□□ -1.71
FOXN1O15353 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.34□□□□□ -1.71
FOXN1O15353 PSMA6P4-201ENST00000603247 718 ntBASIC4.34□□□□□ -1.71
FOXN1O15353 AC123786.2-201ENST00000603459 275 ntBASIC4.34□□□□□ -1.71
FOXN1O15353 SNRPGP17-201ENST00000603780 214 ntBASIC4.34□□□□□ -1.71
FOXN1O15353 AC004853.1-201ENST00000604902 698 ntBASIC4.34□□□□□ -1.71
FOXN1O15353 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.34□□□□□ -1.71
FOXN1O15353 AC090617.10-201ENST00000624308 134 ntBASIC4.34□□□□□ -1.71
FOXN1O15353 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
FOXN1O15353 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
FOXN1O15353 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.72
FOXN1O15353 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
FOXN1O15353 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
FOXN1O15353 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.72
FOXN1O15353 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.33□□□□□ -1.72
FOXN1O15353 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
FOXN1O15353 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
FOXN1O15353 AC090337.1-201ENST00000579651 2074 ntBASIC4.33□□□□□ -1.72
FOXN1O15353 PHKBP1-201ENST00000450951 1951 ntBASIC4.33□□□□□ -1.72
FOXN1O15353 MTND4P35-201ENST00000604257 1375 ntBASIC4.33□□□□□ -1.72
FOXN1O15353 RPL7P26-201ENST00000333817 754 ntBASIC4.33□□□□□ -1.72
FOXN1O15353 MIR369-201ENST00000362155 70 ntBASIC4.33□□□□□ -1.72
FOXN1O15353 Y_RNA.46-201ENST00000362695 102 ntBASIC4.33□□□□□ -1.72
FOXN1O15353 SNORD42.2-201ENST00000365570 69 ntBASIC4.33□□□□□ -1.72
FOXN1O15353 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.33□□□□□ -1.72
FOXN1O15353 Y_RNA.459-201ENST00000384251 102 ntBASIC4.33□□□□□ -1.72
FOXN1O15353 RNU6-574P-201ENST00000384265 107 ntBASIC4.33□□□□□ -1.72
FOXN1O15353 RNU6-510P-201ENST00000391239 108 ntBASIC4.33□□□□□ -1.72
FOXN1O15353 RPL7P25-201ENST00000404151 721 ntBASIC4.33□□□□□ -1.72
FOXN1O15353 RNU2-8P-201ENST00000410727 190 ntBASIC4.33□□□□□ -1.72
FOXN1O15353 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.33□□□□□ -1.72
FOXN1O15353 IFNA20P-201ENST00000436840 528 ntBASIC4.33□□□□□ -1.72
FOXN1O15353 AC092013.1-201ENST00000438795 332 ntBASIC4.33□□□□□ -1.72
FOXN1O15353 SNORA71B-202ENST00000439232 272 ntBASIC4.33□□□□□ -1.72
FOXN1O15353 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.33□□□□□ -1.72
FOXN1O15353 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.33□□□□□ -1.72
FOXN1O15353 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.33□□□□□ -1.72
FOXN1O15353 AC021146.2-201ENST00000504736 556 ntBASIC4.33□□□□□ -1.72
FOXN1O15353 PCBP2P3-201ENST00000509726 843 ntBASIC4.33□□□□□ -1.72
FOXN1O15353 RAC1P2-201ENST00000511164 579 ntBASIC4.33□□□□□ -1.72
FOXN1O15353 SNORA40.12-201ENST00000516329 111 ntBASIC4.33□□□□□ -1.72
FOXN1O15353 RN7SKP283-201ENST00000517197 270 ntBASIC4.33□□□□□ -1.72
FOXN1O15353 AC008562.1-201ENST00000521763 330 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms