Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 RNA5SP380-201ENST00000517190 98 ntBASIC3.12□□□□□ -1.91
CLDN4O14493 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.12□□□□□ -1.91
CLDN4O14493 OR5G4P-201ENST00000525251 760 ntBASIC3.12□□□□□ -1.91
CLDN4O14493 AC093012.1-202ENST00000549403 582 ntBASIC3.12□□□□□ -1.91
CLDN4O14493 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.12□□□□□ -1.91
CLDN4O14493 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CLDN4O14493 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.12□□□□□ -1.91
CLDN4O14493 AL157394.1-201ENST00000562983 1224 ntBASIC3.12□□□□□ -1.91
CLDN4O14493 AC005951.1-201ENST00000576706 485 ntBASIC3.12□□□□□ -1.91
CLDN4O14493 MIR4513-201ENST00000581077 86 ntBASIC3.12□□□□□ -1.91
CLDN4O14493 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.12□□□□□ -1.91
CLDN4O14493 AL590229.1-201ENST00000603497 542 ntBASIC3.12□□□□□ -1.91
CLDN4O14493 AC008277.2-201ENST00000605196 797 ntBASIC3.12□□□□□ -1.91
CLDN4O14493 AC073657.2-201ENST00000605661 303 ntBASIC3.12□□□□□ -1.91
CLDN4O14493 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.12□□□□□ -1.91
CLDN4O14493 OR2AS2P-201ENST00000606902 342 ntBASIC3.12□□□□□ -1.91
CLDN4O14493 BX664608.1-201ENST00000610519 487 ntBASIC3.12□□□□□ -1.91
CLDN4O14493 AC138749.5-201ENST00000611461 208 ntBASIC3.12□□□□□ -1.91
CLDN4O14493 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.12□□□□□ -1.91
CLDN4O14493 AC116165.2-201ENST00000616705 206 ntBASIC3.12□□□□□ -1.91
CLDN4O14493 AC092140.2-201ENST00000618027 521 ntBASIC3.12□□□□□ -1.91
CLDN4O14493 AC009878.1-201ENST00000621819 340 ntBASIC3.12□□□□□ -1.91
CLDN4O14493 AC091953.2-201ENST00000623979 160 ntBASIC3.12□□□□□ -1.91
CLDN4O14493 AC025048.6-202ENST00000627667 438 ntBASIC3.12□□□□□ -1.91
CLDN4O14493 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.12□□□□□ -1.91
CLDN4O14493 OR5H6-203ENST00000642105 978 ntBASIC3.12□□□□□ -1.91
CLDN4O14493 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CLDN4O14493 TPTE2P4-201ENST00000258589 1605 ntBASIC3.11□□□□□ -1.91
CLDN4O14493 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLDN4O14493 SNORA38.1-201ENST00000364172 131 ntBASIC3.11□□□□□ -1.91
CLDN4O14493 DYNLT3P1-201ENST00000378574 347 ntBASIC3.11□□□□□ -1.91
CLDN4O14493 AL359634.1-202ENST00000404721 284 ntBASIC3.11□□□□□ -1.91
CLDN4O14493 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.11□□□□□ -1.91
CLDN4O14493 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLDN4O14493 AL513331.1-201ENST00000411908 397 ntBASIC3.11□□□□□ -1.91
CLDN4O14493 SPA17P1-201ENST00000416656 452 ntBASIC3.11□□□□□ -1.91
CLDN4O14493 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.11□□□□□ -1.91
CLDN4O14493 AC007919.1-201ENST00000429380 217 ntBASIC3.11□□□□□ -1.91
CLDN4O14493 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.11□□□□□ -1.91
CLDN4O14493 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.11□□□□□ -1.91
CLDN4O14493 AL512844.2-201ENST00000433990 593 ntBASIC3.11□□□□□ -1.91
CLDN4O14493 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.11□□□□□ -1.91
CLDN4O14493 AC006028.1-201ENST00000438379 402 ntBASIC3.11□□□□□ -1.91
CLDN4O14493 MTATP6P30-201ENST00000443540 664 ntBASIC3.11□□□□□ -1.91
CLDN4O14493 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.11□□□□□ -1.91
CLDN4O14493 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.11□□□□□ -1.91
CLDN4O14493 AC140076.1-201ENST00000449897 361 ntBASIC3.11□□□□□ -1.91
CLDN4O14493 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.11□□□□□ -1.91
CLDN4O14493 SSXP1-201ENST00000453640 473 ntBASIC3.11□□□□□ -1.91
CLDN4O14493 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.11□□□□□ -1.91
CLDN4O14493 SNRPGP9-201ENST00000456025 225 ntBASIC3.11□□□□□ -1.91
CLDN4O14493 LARP1BP2-201ENST00000486594 519 ntBASIC3.11□□□□□ -1.91
CLDN4O14493 RPL21P13-201ENST00000488305 481 ntBASIC3.11□□□□□ -1.91
CLDN4O14493 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.11□□□□□ -1.91
CLDN4O14493 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.11□□□□□ -1.91
CLDN4O14493 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
CLDN4O14493 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.11□□□□□ -1.91
CLDN4O14493 SNORA31.1-201ENST00000515993 133 ntBASIC3.11□□□□□ -1.91
CLDN4O14493 SNORA31.5-201ENST00000516190 133 ntBASIC3.11□□□□□ -1.91
CLDN4O14493 RNU1-103P-201ENST00000516502 125 ntBASIC3.11□□□□□ -1.91
CLDN4O14493 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.11□□□□□ -1.91
CLDN4O14493 AC100870.1-201ENST00000522035 505 ntBASIC3.11□□□□□ -1.91
CLDN4O14493 AC022878.1-201ENST00000530684 149 ntBASIC3.11□□□□□ -1.91
CLDN4O14493 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.11□□□□□ -1.91
CLDN4O14493 HIGD1AP1-201ENST00000550979 275 ntBASIC3.11□□□□□ -1.91
CLDN4O14493 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.11□□□□□ -1.91
CLDN4O14493 MIR3118-1-201ENST00000581787 76 ntBASIC3.11□□□□□ -1.91
CLDN4O14493 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.11□□□□□ -1.91
CLDN4O14493 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.11□□□□□ -1.91
CLDN4O14493 AC073114.1-201ENST00000612027 490 ntBASIC3.11□□□□□ -1.91
CLDN4O14493 AC007785.2-201ENST00000598627 1916 ntBASIC3.11□□□□□ -1.91
CLDN4O14493 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CLDN4O14493 AC092104.1-201ENST00000497346 1441 ntBASIC3.1□□□□□ -1.91
CLDN4O14493 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CLDN4O14493 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN4O14493 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN4O14493 MIR30E-201ENST00000362104 92 ntBASIC3.1□□□□□ -1.91
CLDN4O14493 RNU6-741P-201ENST00000383889 107 ntBASIC3.1□□□□□ -1.91
CLDN4O14493 SAR1AP2-201ENST00000392696 594 ntBASIC3.1□□□□□ -1.91
CLDN4O14493 Y_RNA.598-201ENST00000410480 95 ntBASIC3.1□□□□□ -1.91
CLDN4O14493 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.1□□□□□ -1.91
CLDN4O14493 Z85995.1-201ENST00000415547 335 ntBASIC3.1□□□□□ -1.91
CLDN4O14493 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.1□□□□□ -1.91
CLDN4O14493 RPS15AP12-201ENST00000419498 388 ntBASIC3.1□□□□□ -1.91
CLDN4O14493 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.1□□□□□ -1.91
CLDN4O14493 AC129850.1-201ENST00000436203 508 ntBASIC3.1□□□□□ -1.91
CLDN4O14493 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.1□□□□□ -1.91
CLDN4O14493 CST9LP2-201ENST00000437612 320 ntBASIC3.1□□□□□ -1.91
CLDN4O14493 AC020550.1-201ENST00000447385 163 ntBASIC3.1□□□□□ -1.91
CLDN4O14493 AC006539.3-201ENST00000454258 129 ntBASIC3.1□□□□□ -1.91
CLDN4O14493 AL135752.1-201ENST00000479477 471 ntBASIC3.1□□□□□ -1.91
CLDN4O14493 AC021205.2-201ENST00000480069 347 ntBASIC3.1□□□□□ -1.91
CLDN4O14493 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.1□□□□□ -1.91
CLDN4O14493 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN4O14493 AP003181.2-201ENST00000528941 181 ntBASIC3.1□□□□□ -1.91
CLDN4O14493 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.1□□□□□ -1.91
CLDN4O14493 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.1□□□□□ -1.91
CLDN4O14493 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.1□□□□□ -1.91
CLDN4O14493 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.1□□□□□ -1.91
CLDN4O14493 DPPA3P3-201ENST00000603842 430 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms