Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.97□□□□□ -1.77
TRIM38O00635 RPL27AP8-201ENST00000424277 446 ntBASIC3.97□□□□□ -1.77
TRIM38O00635 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.97□□□□□ -1.77
TRIM38O00635 HMGB1P12-201ENST00000438594 598 ntBASIC3.97□□□□□ -1.77
TRIM38O00635 AC005094.1-201ENST00000440420 368 ntBASIC3.97□□□□□ -1.77
TRIM38O00635 USP9YP15-201ENST00000442391 422 ntBASIC3.97□□□□□ -1.77
TRIM38O00635 MTCO3P45-201ENST00000443036 613 ntBASIC3.97□□□□□ -1.77
TRIM38O00635 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.97□□□□□ -1.77
TRIM38O00635 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.97□□□□□ -1.77
TRIM38O00635 RAB9AP1-201ENST00000449393 573 ntBASIC3.97□□□□□ -1.77
TRIM38O00635 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.97□□□□□ -1.77
TRIM38O00635 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.97□□□□□ -1.77
TRIM38O00635 RPL7P42-201ENST00000481005 679 ntBASIC3.97□□□□□ -1.77
TRIM38O00635 AP001086.1-201ENST00000494882 321 ntBASIC3.97□□□□□ -1.77
TRIM38O00635 AC020893.1-201ENST00000502452 580 ntBASIC3.97□□□□□ -1.77
TRIM38O00635 AC105914.1-201ENST00000511798 226 ntBASIC3.97□□□□□ -1.77
TRIM38O00635 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.97□□□□□ -1.77
TRIM38O00635 RNU6-327P-201ENST00000516270 127 ntBASIC3.97□□□□□ -1.77
TRIM38O00635 RNU6-1045P-201ENST00000516321 107 ntBASIC3.97□□□□□ -1.77
TRIM38O00635 MTCO2P4-201ENST00000517968 247 ntBASIC3.97□□□□□ -1.77
TRIM38O00635 GNRHR2P1-201ENST00000555315 631 ntBASIC3.97□□□□□ -1.77
TRIM38O00635 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.97□□□□□ -1.77
TRIM38O00635 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.97□□□□□ -1.77
TRIM38O00635 AC137800.2-201ENST00000574375 120 ntBASIC3.97□□□□□ -1.77
TRIM38O00635 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.97□□□□□ -1.77
TRIM38O00635 MIR5684-201ENST00000585074 65 ntBASIC3.97□□□□□ -1.77
TRIM38O00635 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.97□□□□□ -1.77
TRIM38O00635 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.97□□□□□ -1.77
TRIM38O00635 AC110741.2-201ENST00000605278 268 ntBASIC3.97□□□□□ -1.77
TRIM38O00635 AL391813.2-201ENST00000609113 322 ntBASIC3.97□□□□□ -1.77
TRIM38O00635 YWHAEP7-203ENST00000622054 312 ntBASIC3.97□□□□□ -1.77
TRIM38O00635 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.97□□□□□ -1.77
TRIM38O00635 MIR3662-201ENST00000637030 95 ntBASIC3.97□□□□□ -1.77
TRIM38O00635 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM38O00635 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM38O00635 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM38O00635 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM38O00635 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.97□□□□□ -1.77
TRIM38O00635 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.97□□□□□ -1.77
TRIM38O00635 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM38O00635 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.96□□□□□ -1.77
TRIM38O00635 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.77
TRIM38O00635 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.96□□□□□ -1.78
TRIM38O00635 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.96□□□□□ -1.78
TRIM38O00635 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
TRIM38O00635 AC106871.1-201ENST00000568324 3102 ntBASIC3.96□□□□□ -1.78
TRIM38O00635 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM38O00635 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM38O00635 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM38O00635 RNU6-50P-201ENST00000362356 103 ntBASIC3.96□□□□□ -1.78
TRIM38O00635 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
TRIM38O00635 RPS3AP36-201ENST00000398190 775 ntBASIC3.96□□□□□ -1.78
TRIM38O00635 MIR1290-201ENST00000408735 78 ntBASIC3.96□□□□□ -1.78
TRIM38O00635 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.96□□□□□ -1.78
TRIM38O00635 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM38O00635 CRYBB2P1-203ENST00000415709 538 ntBASIC3.96□□□□□ -1.78
TRIM38O00635 AC019097.1-201ENST00000424783 735 ntBASIC3.96□□□□□ -1.78
TRIM38O00635 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.96□□□□□ -1.78
TRIM38O00635 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM38O00635 FABP3P2-201ENST00000453169 399 ntBASIC3.96□□□□□ -1.78
TRIM38O00635 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM38O00635 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.96□□□□□ -1.78
TRIM38O00635 MTND1P3-201ENST00000484956 952 ntBASIC3.96□□□□□ -1.78
TRIM38O00635 BTF3L4P4-201ENST00000506381 449 ntBASIC3.96□□□□□ -1.78
TRIM38O00635 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM38O00635 NDUFB4P2-201ENST00000509515 391 ntBASIC3.96□□□□□ -1.78
TRIM38O00635 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM38O00635 SNORA18.6-201ENST00000516792 115 ntBASIC3.96□□□□□ -1.78
TRIM38O00635 RNU2-46P-201ENST00000517038 113 ntBASIC3.96□□□□□ -1.78
TRIM38O00635 AP003181.2-201ENST00000528941 181 ntBASIC3.96□□□□□ -1.78
TRIM38O00635 AL157687.1-201ENST00000554853 619 ntBASIC3.96□□□□□ -1.78
TRIM38O00635 PSMA3P-201ENST00000555485 635 ntBASIC3.96□□□□□ -1.78
TRIM38O00635 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM38O00635 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.96□□□□□ -1.78
TRIM38O00635 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM38O00635 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.96□□□□□ -1.78
TRIM38O00635 AC105224.1-201ENST00000587055 421 ntBASIC3.96□□□□□ -1.78
TRIM38O00635 AC010205.1-201ENST00000616668 449 ntBASIC3.96□□□□□ -1.78
TRIM38O00635 AC244100.1-202ENST00000621554 382 ntBASIC3.96□□□□□ -1.78
TRIM38O00635 AC048347.1-201ENST00000624621 427 ntBASIC3.96□□□□□ -1.78
TRIM38O00635 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.96□□□□□ -1.78
TRIM38O00635 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM38O00635 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM38O00635 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
TRIM38O00635 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM38O00635 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
TRIM38O00635 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM38O00635 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
TRIM38O00635 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM38O00635 AL672296.1-201ENST00000427780 2158 ntBASIC3.95□□□□□ -1.78
TRIM38O00635 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.95□□□□□ -1.78
TRIM38O00635 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
TRIM38O00635 AC007685.1-201ENST00000329806 452 ntBASIC3.95□□□□□ -1.78
TRIM38O00635 SNORA60-201ENST00000362396 134 ntBASIC3.95□□□□□ -1.78
TRIM38O00635 U8.3-201ENST00000363321 132 ntBASIC3.95□□□□□ -1.78
TRIM38O00635 RNA5SP387-201ENST00000364226 106 ntBASIC3.95□□□□□ -1.78
TRIM38O00635 SNORA23-201ENST00000365128 182 ntBASIC3.95□□□□□ -1.78
TRIM38O00635 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM38O00635 Y_RNA.409-201ENST00000383990 98 ntBASIC3.95□□□□□ -1.78
TRIM38O00635 Y_RNA.419-201ENST00000384041 102 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms