Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC1.61□□□□□ -2.15
SDCBPO00560 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC1.61□□□□□ -2.15
SDCBPO00560 SNORA31.18-201ENST00000517043 134 ntBASIC1.61□□□□□ -2.15
SDCBPO00560 SNORA31.22-201ENST00000517204 135 ntBASIC1.61□□□□□ -2.15
SDCBPO00560 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC1.61□□□□□ -2.15
SDCBPO00560 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.61□□□□□ -2.15
SDCBPO00560 OR5AQ1P-201ENST00000527596 927 ntBASIC1.61□□□□□ -2.15
SDCBPO00560 AC011611.5-201ENST00000552477 578 ntBASIC1.61□□□□□ -2.15
SDCBPO00560 MTCYBP27-201ENST00000555160 670 ntBASIC1.61□□□□□ -2.15
SDCBPO00560 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.61□□□□□ -2.15
SDCBPO00560 AL355877.2-201ENST00000603670 358 ntBASIC1.61□□□□□ -2.15
SDCBPO00560 AC068313.1-201ENST00000604028 1008 ntBASIC1.61□□□□□ -2.15
SDCBPO00560 AL592148.2-201ENST00000612210 372 ntBASIC1.61□□□□□ -2.15
SDCBPO00560 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.61□□□□□ -2.15
SDCBPO00560 AL445493.3-201ENST00000619568 477 ntBASIC1.61□□□□□ -2.15
SDCBPO00560 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.61□□□□□ -2.15
SDCBPO00560 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
SDCBPO00560 AP003399.1-201ENST00000637534 361 ntBASIC1.61□□□□□ -2.15
SDCBPO00560 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.61□□□□□ -2.15
SDCBPO00560 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
SDCBPO00560 RNU6-650P-201ENST00000365658 111 ntBASIC1.6□□□□□ -2.15
SDCBPO00560 RNU6-253P-201ENST00000384730 105 ntBASIC1.6□□□□□ -2.15
SDCBPO00560 AL133264.1-201ENST00000407157 562 ntBASIC1.6□□□□□ -2.15
SDCBPO00560 RN7SKP192-201ENST00000411291 327 ntBASIC1.6□□□□□ -2.15
SDCBPO00560 OFD1P2Y-201ENST00000421895 1149 ntBASIC1.6□□□□□ -2.15
SDCBPO00560 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.6□□□□□ -2.15
SDCBPO00560 THAP5P1-201ENST00000439089 262 ntBASIC1.6□□□□□ -2.15
SDCBPO00560 DDX3P2-201ENST00000446138 111 ntBASIC1.6□□□□□ -2.15
SDCBPO00560 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.6□□□□□ -2.15
SDCBPO00560 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
SDCBPO00560 OR4G11P-201ENST00000492842 939 ntBASIC1.6□□□□□ -2.15
SDCBPO00560 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
SDCBPO00560 RPL38P4-201ENST00000502376 214 ntBASIC1.6□□□□□ -2.15
SDCBPO00560 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
SDCBPO00560 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
SDCBPO00560 SUMO2P6-201ENST00000505273 288 ntBASIC1.6□□□□□ -2.15
SDCBPO00560 COX7A2P2-201ENST00000505291 250 ntBASIC1.6□□□□□ -2.15
SDCBPO00560 AC010468.3-201ENST00000508225 458 ntBASIC1.6□□□□□ -2.15
SDCBPO00560 COL6A4P2-205ENST00000509855 506 ntBASIC1.6□□□□□ -2.15
SDCBPO00560 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
SDCBPO00560 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.6□□□□□ -2.15
SDCBPO00560 RNU5A-7P-201ENST00000515979 116 ntBASIC1.6□□□□□ -2.15
SDCBPO00560 AC024224.1-201ENST00000538284 609 ntBASIC1.6□□□□□ -2.15
SDCBPO00560 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC1.6□□□□□ -2.15
SDCBPO00560 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.6□□□□□ -2.15
SDCBPO00560 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.6□□□□□ -2.15
SDCBPO00560 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.6□□□□□ -2.15
SDCBPO00560 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC1.6□□□□□ -2.15
SDCBPO00560 AC091946.2-201ENST00000606105 291 ntBASIC1.6□□□□□ -2.15
SDCBPO00560 AC093838.1-201ENST00000613014 469 ntBASIC1.6□□□□□ -2.15
SDCBPO00560 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.6□□□□□ -2.15
SDCBPO00560 AC110994.2-201ENST00000635481 492 ntBASIC1.6□□□□□ -2.15
SDCBPO00560 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.6□□□□□ -2.15
SDCBPO00560 AL137003.2-201ENST00000606924 2538 ntBASIC1.6□□□□□ -2.15
SDCBPO00560 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.59□□□□□ -2.15
SDCBPO00560 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.15
SDCBPO00560 ZNF849P-201ENST00000594711 1566 ntBASIC1.59□□□□□ -2.15
SDCBPO00560 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.59□□□□□ -2.15
SDCBPO00560 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.15
SDCBPO00560 U8.2-201ENST00000363156 134 ntBASIC1.59□□□□□ -2.15
SDCBPO00560 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
SDCBPO00560 RNU6-932P-201ENST00000391108 106 ntBASIC1.59□□□□□ -2.15
SDCBPO00560 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.59□□□□□ -2.15
SDCBPO00560 AL035405.1-201ENST00000400795 710 ntBASIC1.59□□□□□ -2.15
SDCBPO00560 RNU6-1328P-201ENST00000410938 106 ntBASIC1.59□□□□□ -2.15
SDCBPO00560 BEND7P1-201ENST00000422058 457 ntBASIC1.59□□□□□ -2.15
SDCBPO00560 AL121882.1-201ENST00000422893 417 ntBASIC1.59□□□□□ -2.15
SDCBPO00560 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.59□□□□□ -2.15
SDCBPO00560 USP12PX-201ENST00000432383 1057 ntBASIC1.59□□□□□ -2.15
SDCBPO00560 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.59□□□□□ -2.15
SDCBPO00560 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
SDCBPO00560 AC002542.1-201ENST00000440683 193 ntBASIC1.59□□□□□ -2.15
SDCBPO00560 MTCO3P43-201ENST00000440974 771 ntBASIC1.59□□□□□ -2.15
SDCBPO00560 GPM6BP3-201ENST00000442797 145 ntBASIC1.59□□□□□ -2.15
SDCBPO00560 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC1.59□□□□□ -2.15
SDCBPO00560 AL353691.1-201ENST00000451332 387 ntBASIC1.59□□□□□ -2.15
SDCBPO00560 USP9YP34-201ENST00000453983 808 ntBASIC1.59□□□□□ -2.15
SDCBPO00560 ANKRD26P4-201ENST00000455755 950 ntBASIC1.59□□□□□ -2.15
SDCBPO00560 RPL30P9-201ENST00000465586 330 ntBASIC1.59□□□□□ -2.15
SDCBPO00560 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.59□□□□□ -2.15
SDCBPO00560 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.59□□□□□ -2.15
SDCBPO00560 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.59□□□□□ -2.15
SDCBPO00560 AC118465.1-201ENST00000513820 1271 ntBASIC1.59□□□□□ -2.15
SDCBPO00560 SCARNA17.1-201ENST00000516211 143 ntBASIC1.59□□□□□ -2.15
SDCBPO00560 SCARNA17.2-201ENST00000516334 143 ntBASIC1.59□□□□□ -2.15
SDCBPO00560 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC1.59□□□□□ -2.15
SDCBPO00560 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.59□□□□□ -2.15
SDCBPO00560 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.59□□□□□ -2.15
SDCBPO00560 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.59□□□□□ -2.15
SDCBPO00560 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC1.59□□□□□ -2.15
SDCBPO00560 ZNF971P-201ENST00000562068 1249 ntBASIC1.59□□□□□ -2.15
SDCBPO00560 AC135628.1-201ENST00000568867 534 ntBASIC1.59□□□□□ -2.15
SDCBPO00560 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.59□□□□□ -2.15
SDCBPO00560 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.59□□□□□ -2.15
SDCBPO00560 AL031176.1-201ENST00000604554 466 ntBASIC1.59□□□□□ -2.15
SDCBPO00560 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.59□□□□□ -2.15
SDCBPO00560 SCARNA17.4-201ENST00000614296 143 ntBASIC1.59□□□□□ -2.15
SDCBPO00560 AL354685.2-201ENST00000448218 1447 ntBASIC1.58□□□□□ -2.16
SDCBPO00560 SNORA38-201ENST00000363946 132 ntBASIC1.58□□□□□ -2.16
SDCBPO00560 SNORA16.1-201ENST00000364597 132 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms