Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 RPL27AP5-201ENST00000469428 449 ntBASIC2.83□□□□□ -1.96
SLC28A1O00337 AC233702.1-201ENST00000482905 502 ntBASIC2.83□□□□□ -1.96
SLC28A1O00337 AC138853.1-201ENST00000503549 823 ntBASIC2.83□□□□□ -1.96
SLC28A1O00337 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SLC28A1O00337 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.83□□□□□ -1.96
SLC28A1O00337 AC116347.2-201ENST00000514912 523 ntBASIC2.83□□□□□ -1.96
SLC28A1O00337 RNU6-64P-201ENST00000517119 105 ntBASIC2.83□□□□□ -1.96
SLC28A1O00337 SNORA31.26-201ENST00000517250 137 ntBASIC2.83□□□□□ -1.96
SLC28A1O00337 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.83□□□□□ -1.96
SLC28A1O00337 AC100870.1-201ENST00000522035 505 ntBASIC2.83□□□□□ -1.96
SLC28A1O00337 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC2.83□□□□□ -1.96
SLC28A1O00337 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.83□□□□□ -1.96
SLC28A1O00337 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.83□□□□□ -1.96
SLC28A1O00337 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.83□□□□□ -1.96
SLC28A1O00337 AC007954.1-201ENST00000554198 494 ntBASIC2.83□□□□□ -1.96
SLC28A1O00337 AC090888.1-201ENST00000561335 1141 ntBASIC2.83□□□□□ -1.96
SLC28A1O00337 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.83□□□□□ -1.96
SLC28A1O00337 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.83□□□□□ -1.96
SLC28A1O00337 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.83□□□□□ -1.96
SLC28A1O00337 MTATP6P24-201ENST00000576835 677 ntBASIC2.83□□□□□ -1.96
SLC28A1O00337 MIR5004-201ENST00000579078 107 ntBASIC2.83□□□□□ -1.96
SLC28A1O00337 AC006504.3-201ENST00000586818 523 ntBASIC2.83□□□□□ -1.96
SLC28A1O00337 AL627309.6-201ENST00000606857 840 ntBASIC2.83□□□□□ -1.96
SLC28A1O00337 AC090115.4-201ENST00000609970 188 ntBASIC2.83□□□□□ -1.96
SLC28A1O00337 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.83□□□□□ -1.96
SLC28A1O00337 AC090970.3-201ENST00000612566 866 ntBASIC2.83□□□□□ -1.96
SLC28A1O00337 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SLC28A1O00337 MIR6075-201ENST00000620782 95 ntBASIC2.83□□□□□ -1.96
SLC28A1O00337 AC131159.1-201ENST00000621854 213 ntBASIC2.83□□□□□ -1.96
SLC28A1O00337 AC068880.5-201ENST00000624331 290 ntBASIC2.83□□□□□ -1.96
SLC28A1O00337 AC017037.3-201ENST00000625016 472 ntBASIC2.83□□□□□ -1.96
SLC28A1O00337 AC008993.2-201ENST00000631744 806 ntBASIC2.83□□□□□ -1.96
SLC28A1O00337 AC110079.1-202ENST00000635213 138 ntBASIC2.83□□□□□ -1.96
SLC28A1O00337 LRRC77P-213ENST00000637727 880 ntBASIC2.83□□□□□ -1.96
SLC28A1O00337 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.83□□□□□ -1.96
SLC28A1O00337 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SLC28A1O00337 ZNF833P-201ENST00000424938 1494 ntBASIC2.83□□□□□ -1.96
SLC28A1O00337 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
SLC28A1O00337 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.82□□□□□ -1.96
SLC28A1O00337 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SLC28A1O00337 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.82□□□□□ -1.96
SLC28A1O00337 AP003122.5-201ENST00000527668 3766 ntBASIC2.82□□□□□ -1.96
SLC28A1O00337 RPL9P7-201ENST00000330965 580 ntBASIC2.82□□□□□ -1.96
SLC28A1O00337 Y_RNA.46-201ENST00000362695 102 ntBASIC2.82□□□□□ -1.96
SLC28A1O00337 SNORA9.2-201ENST00000365361 133 ntBASIC2.82□□□□□ -1.96
SLC28A1O00337 RNU6-140P-201ENST00000384566 108 ntBASIC2.82□□□□□ -1.96
SLC28A1O00337 AL359634.1-202ENST00000404721 284 ntBASIC2.82□□□□□ -1.96
SLC28A1O00337 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.82□□□□□ -1.96
SLC28A1O00337 AL645937.1-202ENST00000421799 937 ntBASIC2.82□□□□□ -1.96
SLC28A1O00337 AL158156.1-201ENST00000422509 473 ntBASIC2.82□□□□□ -1.96
SLC28A1O00337 AC011233.1-201ENST00000422812 283 ntBASIC2.82□□□□□ -1.96
SLC28A1O00337 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.82□□□□□ -1.96
SLC28A1O00337 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.82□□□□□ -1.96
SLC28A1O00337 AL714022.1-201ENST00000439897 151 ntBASIC2.82□□□□□ -1.96
SLC28A1O00337 AC013267.1-201ENST00000458227 267 ntBASIC2.82□□□□□ -1.96
SLC28A1O00337 FTH1P2-201ENST00000466086 412 ntBASIC2.82□□□□□ -1.96
SLC28A1O00337 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.82□□□□□ -1.96
SLC28A1O00337 RN7SL807P-201ENST00000470923 297 ntBASIC2.82□□□□□ -1.96
SLC28A1O00337 RPS26P21-201ENST00000475397 348 ntBASIC2.82□□□□□ -1.96
SLC28A1O00337 AC116337.2-201ENST00000477662 156 ntBASIC2.82□□□□□ -1.96
SLC28A1O00337 RN7SL499P-201ENST00000481141 276 ntBASIC2.82□□□□□ -1.96
SLC28A1O00337 AL160314.1-201ENST00000490836 438 ntBASIC2.82□□□□□ -1.96
SLC28A1O00337 RPL21P129-201ENST00000491732 478 ntBASIC2.82□□□□□ -1.96
SLC28A1O00337 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SLC28A1O00337 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.82□□□□□ -1.96
SLC28A1O00337 HSPD1P15-201ENST00000505573 1122 ntBASIC2.82□□□□□ -1.96
SLC28A1O00337 RNU6-1129P-201ENST00000515964 104 ntBASIC2.82□□□□□ -1.96
SLC28A1O00337 RNU6-927P-201ENST00000516199 100 ntBASIC2.82□□□□□ -1.96
SLC28A1O00337 RN7SKP282-201ENST00000516824 299 ntBASIC2.82□□□□□ -1.96
SLC28A1O00337 ZNF321P-202ENST00000550843 495 ntBASIC2.82□□□□□ -1.96
SLC28A1O00337 AL356432.3-201ENST00000568952 465 ntBASIC2.82□□□□□ -1.96
SLC28A1O00337 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.82□□□□□ -1.96
SLC28A1O00337 AP000403.1-201ENST00000603349 851 ntBASIC2.82□□□□□ -1.96
SLC28A1O00337 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.82□□□□□ -1.96
SLC28A1O00337 AC087683.2-201ENST00000611384 326 ntBASIC2.82□□□□□ -1.96
SLC28A1O00337 AC012314.7-201ENST00000619693 93 ntBASIC2.82□□□□□ -1.96
SLC28A1O00337 AL356266.1-201ENST00000623311 483 ntBASIC2.82□□□□□ -1.96
SLC28A1O00337 AC026422.1-201ENST00000623961 452 ntBASIC2.82□□□□□ -1.96
SLC28A1O00337 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SLC28A1O00337 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.81□□□□□ -1.96
SLC28A1O00337 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SLC28A1O00337 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
SLC28A1O00337 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
SLC28A1O00337 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SLC28A1O00337 AC092435.3-201ENST00000565538 3654 ntBASIC2.81□□□□□ -1.96
SLC28A1O00337 FTLP6-201ENST00000355274 422 ntBASIC2.81□□□□□ -1.96
SLC28A1O00337 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SLC28A1O00337 RNU6-500P-201ENST00000362349 107 ntBASIC2.81□□□□□ -1.96
SLC28A1O00337 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.81□□□□□ -1.96
SLC28A1O00337 SNORA54-201ENST00000384281 123 ntBASIC2.81□□□□□ -1.96
SLC28A1O00337 MIR670-201ENST00000390142 98 ntBASIC2.81□□□□□ -1.96
SLC28A1O00337 SNORD88.1-201ENST00000408684 91 ntBASIC2.81□□□□□ -1.96
SLC28A1O00337 RPL7P8-201ENST00000411964 730 ntBASIC2.81□□□□□ -1.96
SLC28A1O00337 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.81□□□□□ -1.96
SLC28A1O00337 ATG3P1-201ENST00000419507 911 ntBASIC2.81□□□□□ -1.96
SLC28A1O00337 YME1L1P1-201ENST00000429435 297 ntBASIC2.81□□□□□ -1.96
SLC28A1O00337 AC244035.1-201ENST00000430042 390 ntBASIC2.81□□□□□ -1.96
SLC28A1O00337 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.81□□□□□ -1.96
SLC28A1O00337 RPL21P2-201ENST00000440049 481 ntBASIC2.81□□□□□ -1.96
SLC28A1O00337 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms