Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC188H7C350 RNU6-198P-201ENST00000384258 104 ntBASIC3.13□□□□□ -1.91
CCDC188H7C350 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC188H7C350 AL365203.2-201ENST00000423444 196 ntBASIC3.13□□□□□ -1.91
CCDC188H7C350 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC188H7C350 ZNF863P-201ENST00000426746 417 ntBASIC3.13□□□□□ -1.91
CCDC188H7C350 TIMM9P1-201ENST00000436122 256 ntBASIC3.13□□□□□ -1.91
CCDC188H7C350 ARPC3P1-201ENST00000437218 533 ntBASIC3.13□□□□□ -1.91
CCDC188H7C350 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC188H7C350 AC005094.1-201ENST00000440420 368 ntBASIC3.13□□□□□ -1.91
CCDC188H7C350 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC188H7C350 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC188H7C350 AL049734.2-201ENST00000441066 616 ntBASIC3.13□□□□□ -1.91
CCDC188H7C350 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC188H7C350 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC188H7C350 AC016696.1-201ENST00000446949 318 ntBASIC3.13□□□□□ -1.91
CCDC188H7C350 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC188H7C350 SSXP1-201ENST00000453640 473 ntBASIC3.13□□□□□ -1.91
CCDC188H7C350 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC188H7C350 RPL7P5-201ENST00000471472 736 ntBASIC3.13□□□□□ -1.91
CCDC188H7C350 RPS20P22-201ENST00000473700 357 ntBASIC3.13□□□□□ -1.91
CCDC188H7C350 AC109925.1-201ENST00000478069 331 ntBASIC3.13□□□□□ -1.91
CCDC188H7C350 AC006499.5-201ENST00000505037 514 ntBASIC3.13□□□□□ -1.91
CCDC188H7C350 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC188H7C350 AC010486.2-201ENST00000505572 483 ntBASIC3.13□□□□□ -1.91
CCDC188H7C350 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
CCDC188H7C350 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC188H7C350 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC188H7C350 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC188H7C350 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC188H7C350 DUXAP5-201ENST00000529668 529 ntBASIC3.13□□□□□ -1.91
CCDC188H7C350 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC188H7C350 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC188H7C350 AP000403.1-201ENST00000603349 851 ntBASIC3.13□□□□□ -1.91
CCDC188H7C350 DPPA3P3-201ENST00000603842 430 ntBASIC3.13□□□□□ -1.91
CCDC188H7C350 AC019176.2-201ENST00000611579 315 ntBASIC3.13□□□□□ -1.91
CCDC188H7C350 AL020991.1-201ENST00000612314 373 ntBASIC3.13□□□□□ -1.91
CCDC188H7C350 AL603755.1-201ENST00000619504 163 ntBASIC3.13□□□□□ -1.91
CCDC188H7C350 AC010338.1-201ENST00000621823 717 ntBASIC3.13□□□□□ -1.91
CCDC188H7C350 AC091931.1-201ENST00000623488 728 ntBASIC3.13□□□□□ -1.91
CCDC188H7C350 AC007494.3-201ENST00000624660 743 ntBASIC3.13□□□□□ -1.91
CCDC188H7C350 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC188H7C350 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC188H7C350 ZNF833P-201ENST00000424938 1494 ntBASIC3.13□□□□□ -1.91
CCDC188H7C350 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CCDC188H7C350 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC188H7C350 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC188H7C350 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.12□□□□□ -1.91
CCDC188H7C350 RNA5SP139-201ENST00000364340 117 ntBASIC3.12□□□□□ -1.91
CCDC188H7C350 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC188H7C350 RNU6-1035P-201ENST00000384477 107 ntBASIC3.12□□□□□ -1.91
CCDC188H7C350 SNORD67-201ENST00000390833 111 ntBASIC3.12□□□□□ -1.91
CCDC188H7C350 AL357075.1-201ENST00000404107 726 ntBASIC3.12□□□□□ -1.91
CCDC188H7C350 RNU2-33P-201ENST00000410344 192 ntBASIC3.12□□□□□ -1.91
CCDC188H7C350 RPL17P12-201ENST00000413391 526 ntBASIC3.12□□□□□ -1.91
CCDC188H7C350 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.12□□□□□ -1.91
CCDC188H7C350 USP9YP26-201ENST00000421008 661 ntBASIC3.12□□□□□ -1.91
CCDC188H7C350 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC188H7C350 HMGB1P27-201ENST00000431429 603 ntBASIC3.12□□□□□ -1.91
CCDC188H7C350 CETN4P-201ENST00000432407 469 ntBASIC3.12□□□□□ -1.91
CCDC188H7C350 RPL7P34-201ENST00000433316 712 ntBASIC3.12□□□□□ -1.91
CCDC188H7C350 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC188H7C350 BMI1P1-201ENST00000445879 941 ntBASIC3.12□□□□□ -1.91
CCDC188H7C350 AL590365.1-201ENST00000450788 243 ntBASIC3.12□□□□□ -1.91
CCDC188H7C350 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC188H7C350 RPS29P2-201ENST00000479278 136 ntBASIC3.12□□□□□ -1.91
CCDC188H7C350 AL135752.1-201ENST00000479477 471 ntBASIC3.12□□□□□ -1.91
CCDC188H7C350 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC188H7C350 RNU6-1282P-201ENST00000516735 96 ntBASIC3.12□□□□□ -1.91
CCDC188H7C350 RNU6-1003P-201ENST00000517099 105 ntBASIC3.12□□□□□ -1.91
CCDC188H7C350 RNA5SP290-201ENST00000517133 127 ntBASIC3.12□□□□□ -1.91
CCDC188H7C350 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC188H7C350 DUXAP2-201ENST00000519198 589 ntBASIC3.12□□□□□ -1.91
CCDC188H7C350 AC022616.6-201ENST00000520479 119 ntBASIC3.12□□□□□ -1.91
CCDC188H7C350 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC188H7C350 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC188H7C350 AC123904.2-201ENST00000548059 300 ntBASIC3.12□□□□□ -1.91
CCDC188H7C350 KC877982.1-201ENST00000602313 470 ntBASIC3.12□□□□□ -1.91
CCDC188H7C350 AL359999.1-201ENST00000604513 294 ntBASIC3.12□□□□□ -1.91
CCDC188H7C350 AC245517.5-201ENST00000611529 162 ntBASIC3.12□□□□□ -1.91
CCDC188H7C350 AC107871.2-201ENST00000612894 502 ntBASIC3.12□□□□□ -1.91
CCDC188H7C350 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC188H7C350 AC027807.2-201ENST00000616099 408 ntBASIC3.12□□□□□ -1.91
CCDC188H7C350 AC009159.1-201ENST00000618386 642 ntBASIC3.12□□□□□ -1.91
CCDC188H7C350 AC007318.2-201ENST00000620999 243 ntBASIC3.12□□□□□ -1.91
CCDC188H7C350 AP003485.2-201ENST00000623636 610 ntBASIC3.12□□□□□ -1.91
CCDC188H7C350 AP003122.6-201ENST00000623831 495 ntBASIC3.12□□□□□ -1.91
CCDC188H7C350 LRRC77P-213ENST00000637727 880 ntBASIC3.12□□□□□ -1.91
CCDC188H7C350 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
CCDC188H7C350 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC188H7C350 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC188H7C350 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC188H7C350 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC188H7C350 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC188H7C350 GABRG2-229ENST00000641017 3628 ntBASIC3.12□□□□□ -1.91
CCDC188H7C350 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC188H7C350 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC188H7C350 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CCDC188H7C350 SNORA9-201ENST00000384215 133 ntBASIC3.11□□□□□ -1.91
CCDC188H7C350 RNU5A-2P-201ENST00000384337 116 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms