Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC0.96□□□□□ -2.26
CPSF4LA6NMK7 AC010809.3-201ENST00000621310 641 ntBASIC0.96□□□□□ -2.26
CPSF4LA6NMK7 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC0.96□□□□□ -2.26
CPSF4LA6NMK7 AL022578.1-201ENST00000439330 1433 ntBASIC0.96□□□□□ -2.26
CPSF4LA6NMK7 OR4G11P-202ENST00000642116 1414 ntBASIC0.96□□□□□ -2.26
CPSF4LA6NMK7 AC123912.3-201ENST00000600907 1367 ntBASIC0.96□□□□□ -2.26
CPSF4LA6NMK7 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.95□□□□□ -2.26
CPSF4LA6NMK7 CR848007.1-201ENST00000442354 1699 ntBASIC0.95□□□□□ -2.26
CPSF4LA6NMK7 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
CPSF4LA6NMK7 U3.20-201ENST00000390909 217 ntBASIC0.95□□□□□ -2.26
CPSF4LA6NMK7 RNA5SP354-201ENST00000391247 136 ntBASIC0.95□□□□□ -2.26
CPSF4LA6NMK7 CISD1P1-201ENST00000393907 327 ntBASIC0.95□□□□□ -2.26
CPSF4LA6NMK7 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
CPSF4LA6NMK7 MIR1250-201ENST00000408098 113 ntBASIC0.95□□□□□ -2.26
CPSF4LA6NMK7 RPS12P24-201ENST00000412619 387 ntBASIC0.95□□□□□ -2.26
CPSF4LA6NMK7 AC244453.4-201ENST00000419150 388 ntBASIC0.95□□□□□ -2.26
CPSF4LA6NMK7 AC246680.2-201ENST00000422106 389 ntBASIC0.95□□□□□ -2.26
CPSF4LA6NMK7 SDAD1P3-201ENST00000427380 333 ntBASIC0.95□□□□□ -2.26
CPSF4LA6NMK7 AC244035.1-201ENST00000430042 390 ntBASIC0.95□□□□□ -2.26
CPSF4LA6NMK7 HSPE1P21-201ENST00000438283 308 ntBASIC0.95□□□□□ -2.26
CPSF4LA6NMK7 AC118469.1-201ENST00000442943 488 ntBASIC0.95□□□□□ -2.26
CPSF4LA6NMK7 GDI2P2-201ENST00000445131 608 ntBASIC0.95□□□□□ -2.26
CPSF4LA6NMK7 AL500527.1-201ENST00000448532 255 ntBASIC0.95□□□□□ -2.26
CPSF4LA6NMK7 RPL30P12-201ENST00000474666 353 ntBASIC0.95□□□□□ -2.26
CPSF4LA6NMK7 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC0.95□□□□□ -2.26
CPSF4LA6NMK7 AC093770.1-201ENST00000511559 571 ntBASIC0.95□□□□□ -2.26
CPSF4LA6NMK7 AC016065.2-201ENST00000514530 444 ntBASIC0.95□□□□□ -2.26
CPSF4LA6NMK7 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC0.95□□□□□ -2.26
CPSF4LA6NMK7 AC025423.2-201ENST00000537570 439 ntBASIC0.95□□□□□ -2.26
CPSF4LA6NMK7 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC0.95□□□□□ -2.26
CPSF4LA6NMK7 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.95□□□□□ -2.26
CPSF4LA6NMK7 MIR4295-201ENST00000585286 85 ntBASIC0.95□□□□□ -2.26
CPSF4LA6NMK7 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC0.95□□□□□ -2.26
CPSF4LA6NMK7 AL450336.1-201ENST00000605180 586 ntBASIC0.95□□□□□ -2.26
CPSF4LA6NMK7 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC0.95□□□□□ -2.26
CPSF4LA6NMK7 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC0.95□□□□□ -2.26
CPSF4LA6NMK7 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
CPSF4LA6NMK7 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
CPSF4LA6NMK7 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
CPSF4LA6NMK7 AL391987.6-201ENST00000305671 199 ntBASIC0.94□□□□□ -2.26
CPSF4LA6NMK7 RNU6-317P-201ENST00000384031 107 ntBASIC0.94□□□□□ -2.26
CPSF4LA6NMK7 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
CPSF4LA6NMK7 RNA5SP498-201ENST00000411342 120 ntBASIC0.94□□□□□ -2.26
CPSF4LA6NMK7 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.94□□□□□ -2.26
CPSF4LA6NMK7 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC0.94□□□□□ -2.26
CPSF4LA6NMK7 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC0.94□□□□□ -2.26
CPSF4LA6NMK7 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC0.94□□□□□ -2.26
CPSF4LA6NMK7 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC0.94□□□□□ -2.26
CPSF4LA6NMK7 NAP1L1P3-201ENST00000462291 880 ntBASIC0.94□□□□□ -2.26
CPSF4LA6NMK7 RPL31P58-201ENST00000469001 379 ntBASIC0.94□□□□□ -2.26
CPSF4LA6NMK7 PCNAP1-201ENST00000505363 709 ntBASIC0.94□□□□□ -2.26
CPSF4LA6NMK7 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC0.94□□□□□ -2.26
CPSF4LA6NMK7 AC022447.3-201ENST00000506865 495 ntBASIC0.94□□□□□ -2.26
CPSF4LA6NMK7 TPT1P8-201ENST00000510120 555 ntBASIC0.94□□□□□ -2.26
CPSF4LA6NMK7 RNU2-19P-201ENST00000517288 84 ntBASIC0.94□□□□□ -2.26
CPSF4LA6NMK7 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
CPSF4LA6NMK7 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC0.94□□□□□ -2.26
CPSF4LA6NMK7 AC107954.1-201ENST00000565906 727 ntBASIC0.94□□□□□ -2.26
CPSF4LA6NMK7 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
CPSF4LA6NMK7 AC104763.2-201ENST00000604179 382 ntBASIC0.94□□□□□ -2.26
CPSF4LA6NMK7 AC015849.6-201ENST00000605454 474 ntBASIC0.94□□□□□ -2.26
CPSF4LA6NMK7 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.94□□□□□ -2.26
CPSF4LA6NMK7 AC012360.2-201ENST00000609349 391 ntBASIC0.94□□□□□ -2.26
CPSF4LA6NMK7 MIR7973-1-201ENST00000614683 76 ntBASIC0.94□□□□□ -2.26
CPSF4LA6NMK7 AL161629.2-201ENST00000615347 275 ntBASIC0.94□□□□□ -2.26
CPSF4LA6NMK7 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
CPSF4LA6NMK7 SGO1P2-201ENST00000429458 1589 ntBASIC0.94□□□□□ -2.26
CPSF4LA6NMK7 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
CPSF4LA6NMK7 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
CPSF4LA6NMK7 RNU6-697P-201ENST00000363348 107 ntBASIC0.93□□□□□ -2.26
CPSF4LA6NMK7 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC0.93□□□□□ -2.26
CPSF4LA6NMK7 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC0.93□□□□□ -2.26
CPSF4LA6NMK7 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC0.93□□□□□ -2.26
CPSF4LA6NMK7 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC0.93□□□□□ -2.26
CPSF4LA6NMK7 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC0.93□□□□□ -2.26
CPSF4LA6NMK7 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC0.93□□□□□ -2.26
CPSF4LA6NMK7 snoU13.7-201ENST00000459220 104 ntBASIC0.93□□□□□ -2.26
CPSF4LA6NMK7 AC087343.1-201ENST00000477341 475 ntBASIC0.93□□□□□ -2.26
CPSF4LA6NMK7 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC0.93□□□□□ -2.26
CPSF4LA6NMK7 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC0.93□□□□□ -2.26
CPSF4LA6NMK7 SNORA31.25-201ENST00000517242 134 ntBASIC0.93□□□□□ -2.26
CPSF4LA6NMK7 AP005902.1-201ENST00000521358 186 ntBASIC0.93□□□□□ -2.26
CPSF4LA6NMK7 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC0.93□□□□□ -2.26
CPSF4LA6NMK7 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
CPSF4LA6NMK7 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC0.93□□□□□ -2.26
CPSF4LA6NMK7 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC0.93□□□□□ -2.26
CPSF4LA6NMK7 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
CPSF4LA6NMK7 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC0.92□□□□□ -2.26
CPSF4LA6NMK7 SNORA62.1-201ENST00000364287 154 ntBASIC0.92□□□□□ -2.26
CPSF4LA6NMK7 RPS3AP24-201ENST00000407896 734 ntBASIC0.92□□□□□ -2.26
CPSF4LA6NMK7 SNORA81-201ENST00000408493 178 ntBASIC0.92□□□□□ -2.26
CPSF4LA6NMK7 FCF1P2-201ENST00000415284 583 ntBASIC0.92□□□□□ -2.26
CPSF4LA6NMK7 MTCO3P4-201ENST00000419236 787 ntBASIC0.92□□□□□ -2.26
CPSF4LA6NMK7 SNRPEP10-201ENST00000420249 274 ntBASIC0.92□□□□□ -2.26
CPSF4LA6NMK7 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.92□□□□□ -2.26
CPSF4LA6NMK7 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC0.92□□□□□ -2.26
CPSF4LA6NMK7 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC0.92□□□□□ -2.26
CPSF4LA6NMK7 MTCO1P42-201ENST00000457379 726 ntBASIC0.92□□□□□ -2.26
CPSF4LA6NMK7 KLF3P2-201ENST00000465138 268 ntBASIC0.92□□□□□ -2.26
CPSF4LA6NMK7 AC021146.2-201ENST00000504736 556 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms