Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 AC091167.1-201ENST00000492017 396 ntBASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC008958.1-201ENST00000511047 682 ntBASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 RNA5SP49-201ENST00000516450 115 ntBASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 RNA5SP519-201ENST00000516480 119 ntBASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 RN7SKP289-201ENST00000517244 295 ntBASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 OR5D17P-201ENST00000531492 978 ntBASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 CYCSP29-201ENST00000533731 318 ntBASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 AP000763.2-201ENST00000540641 163 ntBASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 OR11H5P-201ENST00000554039 926 ntBASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC026464.5-201ENST00000562497 722 ntBASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC005668.1-201ENST00000571142 476 ntBASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC098826.3-201ENST00000603823 466 ntBASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC090132.2-201ENST00000615881 347 ntBASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL445567.2-201ENST00000618935 498 ntBASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 MIR7154-201ENST00000620673 73 ntBASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
IGHV4-28A0A0C4DH34 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC007685.1-201ENST00000329806 452 ntBASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 RNU1-94P-201ENST00000362627 173 ntBASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 RNU1-14P-201ENST00000362759 152 ntBASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 RNU6-1252P-201ENST00000363054 104 ntBASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 RNU4-73P-201ENST00000363164 141 ntBASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 RNU6-1167P-201ENST00000363227 94 ntBASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 RNU6-82P-201ENST00000363970 107 ntBASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 U3.12-201ENST00000364498 214 ntBASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 RNA5SP22-201ENST00000365393 109 ntBASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 RNU6-393P-201ENST00000384475 107 ntBASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 SNORA70C-201ENST00000384538 135 ntBASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 Y_RNA.530-201ENST00000384587 101 ntBASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 RNA5SP219-201ENST00000390940 113 ntBASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 RPS26P8-201ENST00000393490 348 ntBASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL122016.1-201ENST00000403365 367 ntBASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 BX682237.1-201ENST00000415016 335 ntBASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 Z85995.1-201ENST00000415547 335 ntBASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 CYP4F29P-201ENST00000420685 446 ntBASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 HSPE1P1-201ENST00000421494 318 ntBASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 NDUFB4P7-201ENST00000423198 363 ntBASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC007919.1-201ENST00000429380 217 ntBASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL591704.1-201ENST00000432574 275 ntBASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 HSPD1P21-201ENST00000436541 245 ntBASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 UBE2V1P7-201ENST00000446395 340 ntBASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 RNU6-329P-201ENST00000459618 107 ntBASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL592156.1-201ENST00000508758 304 ntBASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 APOOP4-201ENST00000513530 597 ntBASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 RNU2-58P-201ENST00000516403 183 ntBASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 RN7SKP256-201ENST00000517201 314 ntBASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC105029.1-201ENST00000520250 669 ntBASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 AP003730.1-201ENST00000524605 285 ntBASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC100770.1-201ENST00000532310 322 ntBASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 TOMM20P2-201ENST00000540082 421 ntBASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 RPL23AP97-201ENST00000568955 471 ntBASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 MIR3690-201ENST00000580266 75 ntBASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC005498.1-201ENST00000592125 465 ntBASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC243960.4-201ENST00000600532 288 ntBASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 ATP1B3P1-201ENST00000605365 821 ntBASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 Z82243.1-201ENST00000609432 473 ntBASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 uc_338.5-201ENST00000611839 155 ntBASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 RMST_7.1-201ENST00000621935 268 ntBASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 AL445363.3-201ENST00000623080 671 ntBASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 Z99571.1-201ENST00000636677 394 ntBASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 TPTEP1-208ENST00000636884 213 ntBASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
IGHV4-28A0A0C4DH34 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.09□□□□□ -1.92
IGHV4-28A0A0C4DH34 LARP1BP1-201ENST00000506036 1359 ntBASIC3.09□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms