Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 MTCYBP15-201ENST00000433123 1127 ntBASIC1.69□□□□□ -2.14
TRAV41A0A0B4J266 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.69□□□□□ -2.14
TRAV41A0A0B4J266 RPL32P28-201ENST00000443577 397 ntBASIC1.69□□□□□ -2.14
TRAV41A0A0B4J266 BMI1P1-201ENST00000445879 941 ntBASIC1.69□□□□□ -2.14
TRAV41A0A0B4J266 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.69□□□□□ -2.14
TRAV41A0A0B4J266 AL031659.1-201ENST00000447075 539 ntBASIC1.69□□□□□ -2.14
TRAV41A0A0B4J266 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.69□□□□□ -2.14
TRAV41A0A0B4J266 MRPL42P4-201ENST00000453267 443 ntBASIC1.69□□□□□ -2.14
TRAV41A0A0B4J266 ANKRD26P4-201ENST00000455755 950 ntBASIC1.69□□□□□ -2.14
TRAV41A0A0B4J266 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.69□□□□□ -2.14
TRAV41A0A0B4J266 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.69□□□□□ -2.14
TRAV41A0A0B4J266 OR4G11P-201ENST00000492842 939 ntBASIC1.69□□□□□ -2.14
TRAV41A0A0B4J266 BOLA3P3-201ENST00000505182 232 ntBASIC1.69□□□□□ -2.14
TRAV41A0A0B4J266 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.69□□□□□ -2.14
TRAV41A0A0B4J266 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.69□□□□□ -2.14
TRAV41A0A0B4J266 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC1.69□□□□□ -2.14
TRAV41A0A0B4J266 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
TRAV41A0A0B4J266 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC1.69□□□□□ -2.14
TRAV41A0A0B4J266 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.69□□□□□ -2.14
TRAV41A0A0B4J266 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.69□□□□□ -2.14
TRAV41A0A0B4J266 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.69□□□□□ -2.14
TRAV41A0A0B4J266 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.69□□□□□ -2.14
TRAV41A0A0B4J266 AC093510.2-201ENST00000562820 896 ntBASIC1.69□□□□□ -2.14
TRAV41A0A0B4J266 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.69□□□□□ -2.14
TRAV41A0A0B4J266 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC1.69□□□□□ -2.14
TRAV41A0A0B4J266 BNIP3P24-201ENST00000593398 557 ntBASIC1.69□□□□□ -2.14
TRAV41A0A0B4J266 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.69□□□□□ -2.14
TRAV41A0A0B4J266 AL022067.1-201ENST00000602426 454 ntBASIC1.69□□□□□ -2.14
TRAV41A0A0B4J266 AC005776.1-201ENST00000603164 290 ntBASIC1.69□□□□□ -2.14
TRAV41A0A0B4J266 SNORD14A-201ENST00000606526 91 ntBASIC1.69□□□□□ -2.14
TRAV41A0A0B4J266 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
TRAV41A0A0B4J266 AC013562.2-201ENST00000611632 603 ntBASIC1.69□□□□□ -2.14
TRAV41A0A0B4J266 AC009090.3-201ENST00000616553 565 ntBASIC1.69□□□□□ -2.14
TRAV41A0A0B4J266 DDX10P1-201ENST00000448545 1933 ntBASIC1.69□□□□□ -2.14
TRAV41A0A0B4J266 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
TRAV41A0A0B4J266 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.69□□□□□ -2.14
TRAV41A0A0B4J266 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
TRAV41A0A0B4J266 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.68□□□□□ -2.14
TRAV41A0A0B4J266 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
TRAV41A0A0B4J266 U8.2-201ENST00000363156 134 ntBASIC1.68□□□□□ -2.14
TRAV41A0A0B4J266 RNU5B-1-201ENST00000363286 116 ntBASIC1.68□□□□□ -2.14
TRAV41A0A0B4J266 RNU6-1066P-201ENST00000363573 105 ntBASIC1.68□□□□□ -2.14
TRAV41A0A0B4J266 SNORA3A-201ENST00000364113 130 ntBASIC1.68□□□□□ -2.14
TRAV41A0A0B4J266 RNA5SP126-201ENST00000365092 109 ntBASIC1.68□□□□□ -2.14
TRAV41A0A0B4J266 RNU6-207P-201ENST00000384137 107 ntBASIC1.68□□□□□ -2.14
TRAV41A0A0B4J266 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.68□□□□□ -2.14
TRAV41A0A0B4J266 WARS2P1-201ENST00000429678 537 ntBASIC1.68□□□□□ -2.14
TRAV41A0A0B4J266 AL590233.1-201ENST00000430017 456 ntBASIC1.68□□□□□ -2.14
TRAV41A0A0B4J266 AL139415.2-201ENST00000431968 163 ntBASIC1.68□□□□□ -2.14
TRAV41A0A0B4J266 USP12PX-201ENST00000432383 1057 ntBASIC1.68□□□□□ -2.14
TRAV41A0A0B4J266 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.68□□□□□ -2.14
TRAV41A0A0B4J266 AC096638.1-201ENST00000444678 216 ntBASIC1.68□□□□□ -2.14
TRAV41A0A0B4J266 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.68□□□□□ -2.14
TRAV41A0A0B4J266 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.68□□□□□ -2.14
TRAV41A0A0B4J266 AC022634.1-201ENST00000520765 532 ntBASIC1.68□□□□□ -2.14
TRAV41A0A0B4J266 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.68□□□□□ -2.14
TRAV41A0A0B4J266 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.68□□□□□ -2.14
TRAV41A0A0B4J266 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.68□□□□□ -2.14
TRAV41A0A0B4J266 ISCA1P3-201ENST00000577104 373 ntBASIC1.68□□□□□ -2.14
TRAV41A0A0B4J266 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.68□□□□□ -2.14
TRAV41A0A0B4J266 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.68□□□□□ -2.14
TRAV41A0A0B4J266 TUG1_1.1-201ENST00000610654 145 ntBASIC1.68□□□□□ -2.14
TRAV41A0A0B4J266 AL450472.3-201ENST00000615578 367 ntBASIC1.68□□□□□ -2.14
TRAV41A0A0B4J266 AC010975.3-201ENST00000618727 978 ntBASIC1.68□□□□□ -2.14
TRAV41A0A0B4J266 AC004009.2-201ENST00000623016 728 ntBASIC1.68□□□□□ -2.14
TRAV41A0A0B4J266 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.68□□□□□ -2.14
TRAV41A0A0B4J266 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
TRAV41A0A0B4J266 MTND4P35-201ENST00000604257 1375 ntBASIC1.68□□□□□ -2.14
TRAV41A0A0B4J266 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.68□□□□□ -2.14
TRAV41A0A0B4J266 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.68□□□□□ -2.14
TRAV41A0A0B4J266 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 HMGB1P5-201ENST00000255320 642 ntBASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 RNU6-609P-201ENST00000365459 107 ntBASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 SNORA51.11-201ENST00000384442 131 ntBASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 AL450338.1-201ENST00000407987 512 ntBASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 SNORD23.1-201ENST00000408212 104 ntBASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 U3.37-201ENST00000408528 213 ntBASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 RN7SKP32-201ENST00000410167 303 ntBASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 USP9YP27-201ENST00000418455 438 ntBASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 PTP4A1P7-201ENST00000423476 514 ntBASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 AC019178.2-201ENST00000423595 505 ntBASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 UBE2D3P3-201ENST00000426992 425 ntBASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 MTCYBP45-201ENST00000435243 565 ntBASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 Z80107.1-201ENST00000436830 412 ntBASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 FAM103A2P-201ENST00000444122 354 ntBASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 HMGN1P5-201ENST00000448591 263 ntBASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 MTCO3P11-201ENST00000455103 774 ntBASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 SUMO2P2-201ENST00000456482 255 ntBASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 RPS15AP17-201ENST00000470598 390 ntBASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 LARP1BP2-201ENST00000486594 519 ntBASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.67□□□□□ -2.14
TRAV41A0A0B4J266 RPL9P6-201ENST00000492764 598 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms