Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AC011155.2-201ENST00000623202 216 ntBASIC4.07□□□□□ -1.76
PCDHA3Q9Y5H8 AC025034.2-201ENST00000623264 286 ntBASIC4.07□□□□□ -1.76
PCDHA3Q9Y5H8 AC009033.1-201ENST00000624279 431 ntBASIC4.07□□□□□ -1.76
PCDHA3Q9Y5H8 AC244205.2-202ENST00000635781 342 ntBASIC4.07□□□□□ -1.76
PCDHA3Q9Y5H8 OR52H1-202ENST00000641796 1061 ntBASIC4.07□□□□□ -1.76
PCDHA3Q9Y5H8 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
PCDHA3Q9Y5H8 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
PCDHA3Q9Y5H8 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.07□□□□□ -1.76
PCDHA3Q9Y5H8 SDAD1P2-201ENST00000441308 2028 ntBASIC4.07□□□□□ -1.76
PCDHA3Q9Y5H8 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
PCDHA3Q9Y5H8 RIOK3P1-201ENST00000418778 1528 ntBASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 DEFB108F-201ENST00000344638 222 ntBASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 SNORD115-7-201ENST00000365306 82 ntBASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 AC068538.1-201ENST00000376856 336 ntBASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 RNU6-946P-201ENST00000383878 107 ntBASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 RNU6-701P-201ENST00000384059 107 ntBASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 RNU6-1029P-201ENST00000384109 107 ntBASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 MIR199A2-201ENST00000385289 110 ntBASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 SOD2P1-201ENST00000396543 562 ntBASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 AL356776.1-201ENST00000406574 447 ntBASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 MTCYBP8-201ENST00000422855 651 ntBASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 AC008850.1-201ENST00000427546 362 ntBASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 FTH1P6-201ENST00000430768 320 ntBASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 RPL21P133-201ENST00000443666 476 ntBASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 AC020550.1-201ENST00000447385 163 ntBASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 MTND1P18-201ENST00000448191 573 ntBASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 NUTF2P3-201ENST00000448540 384 ntBASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 RPS29P15-201ENST00000458329 171 ntBASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 RPS20P20-201ENST00000460498 340 ntBASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 HSPE1P6-201ENST00000479457 291 ntBASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 AP000926.1-201ENST00000479573 241 ntBASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 TRBV12-2-201ENST00000489763 344 ntBASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 AC018710.1-201ENST00000506509 158 ntBASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 GMPSP1-201ENST00000514075 579 ntBASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 Y_RNA.702-201ENST00000516843 96 ntBASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 RN7SKP258-201ENST00000517151 304 ntBASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 RNU6-840P-201ENST00000517275 65 ntBASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 AP006587.4-201ENST00000526053 529 ntBASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 AC136624.4-201ENST00000573044 370 ntBASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 AC015917.1-201ENST00000579654 510 ntBASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 BDH2P1-201ENST00000602288 736 ntBASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 MIR6716-201ENST00000613413 80 ntBASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 AL355810.1-201ENST00000614629 552 ntBASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 AC079684.1-201ENST00000621405 437 ntBASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 U6.114-201ENST00000636407 96 ntBASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHA3Q9Y5H8 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHA3Q9Y5H8 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.05□□□□□ -1.76
PCDHA3Q9Y5H8 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.05□□□□□ -1.76
PCDHA3Q9Y5H8 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHA3Q9Y5H8 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
PCDHA3Q9Y5H8 Y_RNA.157-201ENST00000363638 102 ntBASIC4.05□□□□□ -1.76
PCDHA3Q9Y5H8 RNA5SP130-201ENST00000364431 114 ntBASIC4.05□□□□□ -1.76
PCDHA3Q9Y5H8 RNU6-903P-201ENST00000391270 109 ntBASIC4.05□□□□□ -1.76
PCDHA3Q9Y5H8 HSPE1P8-201ENST00000406997 288 ntBASIC4.05□□□□□ -1.76
PCDHA3Q9Y5H8 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDHA3Q9Y5H8 RPL21P111-201ENST00000418453 477 ntBASIC4.05□□□□□ -1.76
PCDHA3Q9Y5H8 AC093106.2-201ENST00000428212 385 ntBASIC4.05□□□□□ -1.76
PCDHA3Q9Y5H8 RPL36AP53-201ENST00000432891 316 ntBASIC4.05□□□□□ -1.76
PCDHA3Q9Y5H8 RPL21P112-201ENST00000434403 463 ntBASIC4.05□□□□□ -1.76
PCDHA3Q9Y5H8 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDHA3Q9Y5H8 AL671855.1-201ENST00000446875 1203 ntBASIC4.05□□□□□ -1.76
PCDHA3Q9Y5H8 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDHA3Q9Y5H8 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.05□□□□□ -1.76
PCDHA3Q9Y5H8 AC084198.1-201ENST00000477747 402 ntBASIC4.05□□□□□ -1.76
PCDHA3Q9Y5H8 AC092436.1-201ENST00000506450 503 ntBASIC4.05□□□□□ -1.76
PCDHA3Q9Y5H8 AC004062.1-201ENST00000509926 645 ntBASIC4.05□□□□□ -1.76
PCDHA3Q9Y5H8 RNU6-352P-201ENST00000516908 107 ntBASIC4.05□□□□□ -1.76
PCDHA3Q9Y5H8 RNA5SP503-201ENST00000517047 117 ntBASIC4.05□□□□□ -1.76
PCDHA3Q9Y5H8 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.05□□□□□ -1.76
PCDHA3Q9Y5H8 SUB1P1-201ENST00000524415 382 ntBASIC4.05□□□□□ -1.76
PCDHA3Q9Y5H8 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDHA3Q9Y5H8 OR5B19P-201ENST00000531766 928 ntBASIC4.05□□□□□ -1.76
PCDHA3Q9Y5H8 SNRPGP16-201ENST00000533275 226 ntBASIC4.05□□□□□ -1.76
PCDHA3Q9Y5H8 TOMM20P2-201ENST00000540082 421 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms