Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 Y_RNA.402-201ENST00000383972 102 ntBASIC3.62□□□□□ -1.83
PKP3Q9Y446 Y_RNA.481-201ENST00000384373 102 ntBASIC3.62□□□□□ -1.83
PKP3Q9Y446 MIR1-2-201ENST00000384961 85 ntBASIC3.62□□□□□ -1.83
PKP3Q9Y446 RPL21P17-201ENST00000397467 475 ntBASIC3.62□□□□□ -1.83
PKP3Q9Y446 AL359634.1-202ENST00000404721 284 ntBASIC3.62□□□□□ -1.83
PKP3Q9Y446 RNU2-37P-201ENST00000410695 177 ntBASIC3.62□□□□□ -1.83
PKP3Q9Y446 RPL30P2-201ENST00000414021 291 ntBASIC3.62□□□□□ -1.83
PKP3Q9Y446 AL353193.1-201ENST00000421444 268 ntBASIC3.62□□□□□ -1.83
PKP3Q9Y446 ELOCP14-201ENST00000428070 331 ntBASIC3.62□□□□□ -1.83
PKP3Q9Y446 AL596276.1-201ENST00000434465 418 ntBASIC3.62□□□□□ -1.83
PKP3Q9Y446 RPS20P5-201ENST00000434808 360 ntBASIC3.62□□□□□ -1.83
PKP3Q9Y446 ELOCP7-201ENST00000439968 331 ntBASIC3.62□□□□□ -1.83
PKP3Q9Y446 RPL26P6-201ENST00000440913 438 ntBASIC3.62□□□□□ -1.83
PKP3Q9Y446 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.62□□□□□ -1.83
PKP3Q9Y446 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.62□□□□□ -1.83
PKP3Q9Y446 AC027673.1-201ENST00000456245 405 ntBASIC3.62□□□□□ -1.83
PKP3Q9Y446 AC010631.1-201ENST00000474150 156 ntBASIC3.62□□□□□ -1.83
PKP3Q9Y446 NDUFB4P9-201ENST00000511646 388 ntBASIC3.62□□□□□ -1.83
PKP3Q9Y446 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.62□□□□□ -1.83
PKP3Q9Y446 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.62□□□□□ -1.83
PKP3Q9Y446 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.62□□□□□ -1.83
PKP3Q9Y446 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.62□□□□□ -1.83
PKP3Q9Y446 RN7SKP18-201ENST00000516005 275 ntBASIC3.62□□□□□ -1.83
PKP3Q9Y446 SNORA70.14-201ENST00000516205 110 ntBASIC3.62□□□□□ -1.83
PKP3Q9Y446 RNU6-390P-201ENST00000516259 103 ntBASIC3.62□□□□□ -1.83
PKP3Q9Y446 RNU6-1178P-201ENST00000516674 107 ntBASIC3.62□□□□□ -1.83
PKP3Q9Y446 RNU1-45P-201ENST00000517191 141 ntBASIC3.62□□□□□ -1.83
PKP3Q9Y446 SNORA31.22-201ENST00000517204 135 ntBASIC3.62□□□□□ -1.83
PKP3Q9Y446 RANP9-201ENST00000519957 271 ntBASIC3.62□□□□□ -1.83
PKP3Q9Y446 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.62□□□□□ -1.83
PKP3Q9Y446 SNRPGP16-201ENST00000533275 226 ntBASIC3.62□□□□□ -1.83
PKP3Q9Y446 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.62□□□□□ -1.83
PKP3Q9Y446 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.62□□□□□ -1.83
PKP3Q9Y446 AK6P1-201ENST00000540219 478 ntBASIC3.62□□□□□ -1.83
PKP3Q9Y446 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.62□□□□□ -1.83
PKP3Q9Y446 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.62□□□□□ -1.83
PKP3Q9Y446 OR4H12P-201ENST00000556269 907 ntBASIC3.62□□□□□ -1.83
PKP3Q9Y446 AL133241.1-201ENST00000556832 487 ntBASIC3.62□□□□□ -1.83
PKP3Q9Y446 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.62□□□□□ -1.83
PKP3Q9Y446 AC092325.1-201ENST00000566449 554 ntBASIC3.62□□□□□ -1.83
PKP3Q9Y446 SNORA59B-202ENST00000578183 701 ntBASIC3.62□□□□□ -1.83
PKP3Q9Y446 AC006116.10-201ENST00000591836 581 ntBASIC3.62□□□□□ -1.83
PKP3Q9Y446 AC244505.7-201ENST00000599675 272 ntBASIC3.62□□□□□ -1.83
PKP3Q9Y446 AC025449.1-201ENST00000603896 529 ntBASIC3.62□□□□□ -1.83
PKP3Q9Y446 AP002360.4-201ENST00000606980 481 ntBASIC3.62□□□□□ -1.83
PKP3Q9Y446 AP001330.5-201ENST00000607176 411 ntBASIC3.62□□□□□ -1.83
PKP3Q9Y446 AC008536.2-201ENST00000607284 349 ntBASIC3.62□□□□□ -1.83
PKP3Q9Y446 MIR3688-2-201ENST00000636963 87 ntBASIC3.62□□□□□ -1.83
PKP3Q9Y446 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.62□□□□□ -1.83
PKP3Q9Y446 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.62□□□□□ -1.83
PKP3Q9Y446 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.62□□□□□ -1.83
PKP3Q9Y446 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
PKP3Q9Y446 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
PKP3Q9Y446 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
PKP3Q9Y446 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PKP3Q9Y446 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.61□□□□□ -1.83
PKP3Q9Y446 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.61□□□□□ -1.83
PKP3Q9Y446 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PKP3Q9Y446 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PKP3Q9Y446 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PKP3Q9Y446 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PKP3Q9Y446 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PKP3Q9Y446 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
PKP3Q9Y446 Y_RNA.22-201ENST00000362492 102 ntBASIC3.61□□□□□ -1.83
PKP3Q9Y446 RNA5SP51-201ENST00000364750 119 ntBASIC3.61□□□□□ -1.83
PKP3Q9Y446 AL359837.1-201ENST00000381357 287 ntBASIC3.61□□□□□ -1.83
PKP3Q9Y446 RNU6-641P-201ENST00000384006 107 ntBASIC3.61□□□□□ -1.83
PKP3Q9Y446 RNU6-74P-201ENST00000384235 107 ntBASIC3.61□□□□□ -1.83
PKP3Q9Y446 MIR607-201ENST00000385241 96 ntBASIC3.61□□□□□ -1.83
PKP3Q9Y446 RPS4XP8-201ENST00000402039 771 ntBASIC3.61□□□□□ -1.83
PKP3Q9Y446 RNU2-9P-201ENST00000410194 145 ntBASIC3.61□□□□□ -1.83
PKP3Q9Y446 ATP5A1P2-201ENST00000412323 255 ntBASIC3.61□□□□□ -1.83
PKP3Q9Y446 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.61□□□□□ -1.83
PKP3Q9Y446 USP12PX-201ENST00000432383 1057 ntBASIC3.61□□□□□ -1.83
PKP3Q9Y446 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PKP3Q9Y446 CYCSP43-201ENST00000438233 310 ntBASIC3.61□□□□□ -1.83
PKP3Q9Y446 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PKP3Q9Y446 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.61□□□□□ -1.83
PKP3Q9Y446 RPL23AP31-201ENST00000456160 467 ntBASIC3.61□□□□□ -1.83
PKP3Q9Y446 SNORD105B-201ENST00000458770 79 ntBASIC3.61□□□□□ -1.83
PKP3Q9Y446 MTCO3P38-201ENST00000468910 766 ntBASIC3.61□□□□□ -1.83
PKP3Q9Y446 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.61□□□□□ -1.83
PKP3Q9Y446 AC108860.1-201ENST00000484521 383 ntBASIC3.61□□□□□ -1.83
PKP3Q9Y446 NIPA2P2-201ENST00000496376 1083 ntBASIC3.61□□□□□ -1.83
PKP3Q9Y446 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.61□□□□□ -1.83
PKP3Q9Y446 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.61□□□□□ -1.83
PKP3Q9Y446 AC108043.1-201ENST00000512696 574 ntBASIC3.61□□□□□ -1.83
PKP3Q9Y446 Y_RNA.704-201ENST00000516851 102 ntBASIC3.61□□□□□ -1.83
PKP3Q9Y446 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.61□□□□□ -1.83
PKP3Q9Y446 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.61□□□□□ -1.83
PKP3Q9Y446 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.61□□□□□ -1.83
PKP3Q9Y446 AC093012.1-202ENST00000549403 582 ntBASIC3.61□□□□□ -1.83
PKP3Q9Y446 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.61□□□□□ -1.83
PKP3Q9Y446 AL157687.1-201ENST00000554853 619 ntBASIC3.61□□□□□ -1.83
PKP3Q9Y446 AL121576.1-201ENST00000556055 276 ntBASIC3.61□□□□□ -1.83
PKP3Q9Y446 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.61□□□□□ -1.83
PKP3Q9Y446 AC025678.1-201ENST00000567861 338 ntBASIC3.61□□□□□ -1.83
PKP3Q9Y446 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.61□□□□□ -1.83
PKP3Q9Y446 AC006504.3-201ENST00000586818 523 ntBASIC3.61□□□□□ -1.83
PKP3Q9Y446 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms