Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 SSR1P2-201ENST00000415208 787 ntBASIC2.36□□□□□ -2.03
KCNIP3Q9Y2W7 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.36□□□□□ -2.03
KCNIP3Q9Y2W7 HMGB1P49-201ENST00000418882 569 ntBASIC2.36□□□□□ -2.03
KCNIP3Q9Y2W7 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.36□□□□□ -2.03
KCNIP3Q9Y2W7 AL358075.3-201ENST00000426289 226 ntBASIC2.36□□□□□ -2.03
KCNIP3Q9Y2W7 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.36□□□□□ -2.03
KCNIP3Q9Y2W7 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.36□□□□□ -2.03
KCNIP3Q9Y2W7 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.36□□□□□ -2.03
KCNIP3Q9Y2W7 CR769776.1-201ENST00000441254 787 ntBASIC2.36□□□□□ -2.03
KCNIP3Q9Y2W7 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC2.36□□□□□ -2.03
KCNIP3Q9Y2W7 RPL23AP35-201ENST00000451906 501 ntBASIC2.36□□□□□ -2.03
KCNIP3Q9Y2W7 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.36□□□□□ -2.03
KCNIP3Q9Y2W7 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.36□□□□□ -2.03
KCNIP3Q9Y2W7 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.36□□□□□ -2.03
KCNIP3Q9Y2W7 RNU7-59P-201ENST00000459101 61 ntBASIC2.36□□□□□ -2.03
KCNIP3Q9Y2W7 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC2.36□□□□□ -2.03
KCNIP3Q9Y2W7 RN7SL293P-201ENST00000481765 281 ntBASIC2.36□□□□□ -2.03
KCNIP3Q9Y2W7 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.36□□□□□ -2.03
KCNIP3Q9Y2W7 RNU6-927P-201ENST00000516199 100 ntBASIC2.36□□□□□ -2.03
KCNIP3Q9Y2W7 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.36□□□□□ -2.03
KCNIP3Q9Y2W7 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
KCNIP3Q9Y2W7 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.36□□□□□ -2.03
KCNIP3Q9Y2W7 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
KCNIP3Q9Y2W7 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.36□□□□□ -2.03
KCNIP3Q9Y2W7 AC005498.1-201ENST00000592125 465 ntBASIC2.36□□□□□ -2.03
KCNIP3Q9Y2W7 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.36□□□□□ -2.03
KCNIP3Q9Y2W7 AC245389.1-201ENST00000605141 529 ntBASIC2.36□□□□□ -2.03
KCNIP3Q9Y2W7 BCRP9-201ENST00000605312 388 ntBASIC2.36□□□□□ -2.03
KCNIP3Q9Y2W7 AC092953.2-201ENST00000608000 699 ntBASIC2.36□□□□□ -2.03
KCNIP3Q9Y2W7 AC104237.2-201ENST00000612456 443 ntBASIC2.36□□□□□ -2.03
KCNIP3Q9Y2W7 CR392039.5-201ENST00000623201 510 ntBASIC2.36□□□□□ -2.03
KCNIP3Q9Y2W7 AL078595.3-201ENST00000623815 1166 ntBASIC2.36□□□□□ -2.03
KCNIP3Q9Y2W7 AC112204.3-201ENST00000623822 332 ntBASIC2.36□□□□□ -2.03
KCNIP3Q9Y2W7 AC097655.1-201ENST00000635075 318 ntBASIC2.36□□□□□ -2.03
KCNIP3Q9Y2W7 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.36□□□□□ -2.03
KCNIP3Q9Y2W7 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.36□□□□□ -2.03
KCNIP3Q9Y2W7 PABPC1P9-201ENST00000426076 1612 ntBASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 ZNF833P-201ENST00000424938 1494 ntBASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 AL049781.1-201ENST00000623195 3585 ntBASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 RNA5SP124-201ENST00000362739 110 ntBASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 RNU6-769P-201ENST00000384407 104 ntBASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 RNU6-851P-201ENST00000384565 107 ntBASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 MIR627-201ENST00000384979 97 ntBASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 MIR513B-201ENST00000385136 84 ntBASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 RPS4XP7-201ENST00000406274 780 ntBASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 AL035407.1-201ENST00000429211 571 ntBASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 AC091286.1-201ENST00000431233 461 ntBASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 CR769767.1-201ENST00000436337 346 ntBASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 AL513043.1-201ENST00000439124 535 ntBASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 AL591503.2-201ENST00000442314 1005 ntBASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 ELOCP30-201ENST00000447108 299 ntBASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 AL133547.1-201ENST00000448546 220 ntBASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 RPS15AP27-201ENST00000449183 343 ntBASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 NUTF2P7-201ENST00000453086 375 ntBASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 RPL12P25-201ENST00000455592 494 ntBASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 MRPS17P3-201ENST00000465453 385 ntBASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 AC091153.1-201ENST00000466297 402 ntBASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 AC117440.1-201ENST00000474107 571 ntBASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 AC010631.1-201ENST00000474150 156 ntBASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 RPL36AP51-201ENST00000487216 318 ntBASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 MRPS36P2-201ENST00000512569 299 ntBASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 MTND5P13-201ENST00000513046 1079 ntBASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 RNU6-311P-201ENST00000516224 102 ntBASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 RNU5A-4P-201ENST00000516588 111 ntBASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 DUXAP2-201ENST00000519198 589 ntBASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 AC100870.1-201ENST00000522035 505 ntBASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 GLYCAM1-201ENST00000546596 285 ntBASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 AL359212.1-201ENST00000556608 614 ntBASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 AC025281.1-201ENST00000567026 265 ntBASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 MIR544B-201ENST00000582372 78 ntBASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 AC011471.1-201ENST00000585766 187 ntBASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 ZNF861P-201ENST00000588126 639 ntBASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 AC015871.2-201ENST00000603605 948 ntBASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 AL450336.1-201ENST00000605180 586 ntBASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 AC007038.2-201ENST00000608095 740 ntBASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 AC092106.3-201ENST00000611308 722 ntBASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 AC008498.1-201ENST00000613012 531 ntBASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 AC079395.3-201ENST00000615161 484 ntBASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 CCT4P2-201ENST00000233836 1548 ntBASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
KCNIP3Q9Y2W7 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms