Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.75□□□□□ -1.97
FOXA2Q9Y261 AC017079.2-201ENST00000416102 485 ntBASIC2.75□□□□□ -1.97
FOXA2Q9Y261 AL356968.1-201ENST00000416622 474 ntBASIC2.75□□□□□ -1.97
FOXA2Q9Y261 DBIP2-201ENST00000419076 262 ntBASIC2.75□□□□□ -1.97
FOXA2Q9Y261 AC245291.1-201ENST00000419501 328 ntBASIC2.75□□□□□ -1.97
FOXA2Q9Y261 RAC1P6-201ENST00000423911 575 ntBASIC2.75□□□□□ -1.97
FOXA2Q9Y261 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.75□□□□□ -1.97
FOXA2Q9Y261 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.75□□□□□ -1.97
FOXA2Q9Y261 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
FOXA2Q9Y261 AL353705.1-201ENST00000433468 480 ntBASIC2.75□□□□□ -1.97
FOXA2Q9Y261 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.75□□□□□ -1.97
FOXA2Q9Y261 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.75□□□□□ -1.97
FOXA2Q9Y261 AC009296.1-201ENST00000443146 155 ntBASIC2.75□□□□□ -1.97
FOXA2Q9Y261 RPS15AP27-201ENST00000449183 343 ntBASIC2.75□□□□□ -1.97
FOXA2Q9Y261 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC2.75□□□□□ -1.97
FOXA2Q9Y261 SNORD97-201ENST00000459187 142 ntBASIC2.75□□□□□ -1.97
FOXA2Q9Y261 RN7SL442P-201ENST00000473804 320 ntBASIC2.75□□□□□ -1.97
FOXA2Q9Y261 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.75□□□□□ -1.97
FOXA2Q9Y261 RPS29P20-201ENST00000489592 171 ntBASIC2.75□□□□□ -1.97
FOXA2Q9Y261 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.75□□□□□ -1.97
FOXA2Q9Y261 AC006499.5-201ENST00000505037 514 ntBASIC2.75□□□□□ -1.97
FOXA2Q9Y261 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.75□□□□□ -1.97
FOXA2Q9Y261 MTND1P22-201ENST00000510572 951 ntBASIC2.75□□□□□ -1.97
FOXA2Q9Y261 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.75□□□□□ -1.97
FOXA2Q9Y261 PHBP14-201ENST00000512887 367 ntBASIC2.75□□□□□ -1.97
FOXA2Q9Y261 SNORA67.7-201ENST00000516664 135 ntBASIC2.75□□□□□ -1.97
FOXA2Q9Y261 RNA5SP471-201ENST00000516971 106 ntBASIC2.75□□□□□ -1.97
FOXA2Q9Y261 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.75□□□□□ -1.97
FOXA2Q9Y261 AC022634.1-201ENST00000520765 532 ntBASIC2.75□□□□□ -1.97
FOXA2Q9Y261 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.75□□□□□ -1.97
FOXA2Q9Y261 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
FOXA2Q9Y261 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
FOXA2Q9Y261 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.75□□□□□ -1.97
FOXA2Q9Y261 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.75□□□□□ -1.97
FOXA2Q9Y261 AC128657.1-201ENST00000549459 145 ntBASIC2.75□□□□□ -1.97
FOXA2Q9Y261 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.75□□□□□ -1.97
FOXA2Q9Y261 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.75□□□□□ -1.97
FOXA2Q9Y261 AC025281.1-201ENST00000567026 265 ntBASIC2.75□□□□□ -1.97
FOXA2Q9Y261 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.75□□□□□ -1.97
FOXA2Q9Y261 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.75□□□□□ -1.97
FOXA2Q9Y261 AC008507.1-201ENST00000587506 734 ntBASIC2.75□□□□□ -1.97
FOXA2Q9Y261 AL670379.6-201ENST00000603753 252 ntBASIC2.75□□□□□ -1.97
FOXA2Q9Y261 AL670379.11-201ENST00000604059 253 ntBASIC2.75□□□□□ -1.97
FOXA2Q9Y261 AL161798.1-201ENST00000604630 131 ntBASIC2.75□□□□□ -1.97
FOXA2Q9Y261 AC008162.1-201ENST00000604718 254 ntBASIC2.75□□□□□ -1.97
FOXA2Q9Y261 AL670379.1-201ENST00000604752 252 ntBASIC2.75□□□□□ -1.97
FOXA2Q9Y261 AP000860.1-201ENST00000605250 559 ntBASIC2.75□□□□□ -1.97
FOXA2Q9Y261 AL670379.5-201ENST00000605253 252 ntBASIC2.75□□□□□ -1.97
FOXA2Q9Y261 AL670379.12-201ENST00000605291 253 ntBASIC2.75□□□□□ -1.97
FOXA2Q9Y261 AL670379.8-201ENST00000605353 252 ntBASIC2.75□□□□□ -1.97
FOXA2Q9Y261 AL670379.7-201ENST00000605823 252 ntBASIC2.75□□□□□ -1.97
FOXA2Q9Y261 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.75□□□□□ -1.97
FOXA2Q9Y261 AC107294.1-201ENST00000609524 467 ntBASIC2.75□□□□□ -1.97
FOXA2Q9Y261 AL360219.1-201ENST00000610230 366 ntBASIC2.75□□□□□ -1.97
FOXA2Q9Y261 AC122133.1-201ENST00000613964 233 ntBASIC2.75□□□□□ -1.97
FOXA2Q9Y261 AC027807.2-201ENST00000616099 408 ntBASIC2.75□□□□□ -1.97
FOXA2Q9Y261 MESTIT1_2.1-201ENST00000616328 235 ntBASIC2.75□□□□□ -1.97
FOXA2Q9Y261 AC006338.1-201ENST00000618453 749 ntBASIC2.75□□□□□ -1.97
FOXA2Q9Y261 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.75□□□□□ -1.97
FOXA2Q9Y261 AC079416.3-201ENST00000624479 549 ntBASIC2.75□□□□□ -1.97
FOXA2Q9Y261 AC073476.4-201ENST00000628409 72 ntBASIC2.75□□□□□ -1.97
FOXA2Q9Y261 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
FOXA2Q9Y261 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
FOXA2Q9Y261 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.75□□□□□ -1.97
FOXA2Q9Y261 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
FOXA2Q9Y261 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
FOXA2Q9Y261 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.75□□□□□ -1.97
FOXA2Q9Y261 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
FOXA2Q9Y261 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
FOXA2Q9Y261 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.74□□□□□ -1.97
FOXA2Q9Y261 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.74□□□□□ -1.97
FOXA2Q9Y261 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
FOXA2Q9Y261 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
FOXA2Q9Y261 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
FOXA2Q9Y261 OR1S2-201ENST00000302592 978 ntBASIC2.74□□□□□ -1.97
FOXA2Q9Y261 RNA5SP383-201ENST00000362934 120 ntBASIC2.74□□□□□ -1.97
FOXA2Q9Y261 RNU6-512P-201ENST00000364438 103 ntBASIC2.74□□□□□ -1.97
FOXA2Q9Y261 SNORA73.2-201ENST00000364946 201 ntBASIC2.74□□□□□ -1.97
FOXA2Q9Y261 RNU6-805P-201ENST00000365643 106 ntBASIC2.74□□□□□ -1.97
FOXA2Q9Y261 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.74□□□□□ -1.97
FOXA2Q9Y261 RNU5A-2P-201ENST00000384337 116 ntBASIC2.74□□□□□ -1.97
FOXA2Q9Y261 MIR449B-201ENST00000384995 97 ntBASIC2.74□□□□□ -1.97
FOXA2Q9Y261 AL021407.1-201ENST00000404531 386 ntBASIC2.74□□□□□ -1.97
FOXA2Q9Y261 RN7SKP27-201ENST00000410684 333 ntBASIC2.74□□□□□ -1.97
FOXA2Q9Y261 RNU2-68P-201ENST00000410878 191 ntBASIC2.74□□□□□ -1.97
FOXA2Q9Y261 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.74□□□□□ -1.97
FOXA2Q9Y261 ZNF90P2-204ENST00000419323 1075 ntBASIC2.74□□□□□ -1.97
FOXA2Q9Y261 RPS15AP12-201ENST00000419498 388 ntBASIC2.74□□□□□ -1.97
FOXA2Q9Y261 RPS15AP6-201ENST00000420703 385 ntBASIC2.74□□□□□ -1.97
FOXA2Q9Y261 RPL7P37-201ENST00000425095 738 ntBASIC2.74□□□□□ -1.97
FOXA2Q9Y261 MED14P1-201ENST00000430517 648 ntBASIC2.74□□□□□ -1.97
FOXA2Q9Y261 AC091286.1-201ENST00000431233 461 ntBASIC2.74□□□□□ -1.97
FOXA2Q9Y261 GTF2IP20-201ENST00000431663 360 ntBASIC2.74□□□□□ -1.97
FOXA2Q9Y261 HMGN2P31-201ENST00000432430 273 ntBASIC2.74□□□□□ -1.97
FOXA2Q9Y261 ISCA1P2-201ENST00000438679 421 ntBASIC2.74□□□□□ -1.97
FOXA2Q9Y261 AC093156.1-201ENST00000440382 670 ntBASIC2.74□□□□□ -1.97
FOXA2Q9Y261 MTND1P30-201ENST00000441241 901 ntBASIC2.74□□□□□ -1.97
FOXA2Q9Y261 NEFMP1-201ENST00000443423 1006 ntBASIC2.74□□□□□ -1.97
FOXA2Q9Y261 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.74□□□□□ -1.97
FOXA2Q9Y261 VN1R34P-201ENST00000447387 883 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms