Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 AL135752.1-201ENST00000479477 471 ntBASIC2.95□□□□□ -1.94
SMC3Q9UQE7 MRPL42P6-201ENST00000486397 371 ntBASIC2.95□□□□□ -1.94
SMC3Q9UQE7 FAM172BP-201ENST00000487497 1089 ntBASIC2.95□□□□□ -1.94
SMC3Q9UQE7 AC135721.1-201ENST00000497954 479 ntBASIC2.95□□□□□ -1.94
SMC3Q9UQE7 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.95□□□□□ -1.94
SMC3Q9UQE7 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.95□□□□□ -1.94
SMC3Q9UQE7 AC034159.1-201ENST00000513885 583 ntBASIC2.95□□□□□ -1.94
SMC3Q9UQE7 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.95□□□□□ -1.94
SMC3Q9UQE7 AC109329.2-201ENST00000519658 482 ntBASIC2.95□□□□□ -1.94
SMC3Q9UQE7 AC103783.1-201ENST00000520506 373 ntBASIC2.95□□□□□ -1.94
SMC3Q9UQE7 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
SMC3Q9UQE7 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.95□□□□□ -1.94
SMC3Q9UQE7 AC010546.1-201ENST00000569391 485 ntBASIC2.95□□□□□ -1.94
SMC3Q9UQE7 MTND1P8-201ENST00000571424 950 ntBASIC2.95□□□□□ -1.94
SMC3Q9UQE7 AL390208.1-201ENST00000605885 644 ntBASIC2.95□□□□□ -1.94
SMC3Q9UQE7 AC080013.3-201ENST00000606839 578 ntBASIC2.95□□□□□ -1.94
SMC3Q9UQE7 AL450472.3-201ENST00000615578 367 ntBASIC2.95□□□□□ -1.94
SMC3Q9UQE7 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.95□□□□□ -1.94
SMC3Q9UQE7 AC116618.1-201ENST00000634617 774 ntBASIC2.95□□□□□ -1.94
SMC3Q9UQE7 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SMC3Q9UQE7 SDAD1P2-201ENST00000441308 2028 ntBASIC2.95□□□□□ -1.94
SMC3Q9UQE7 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
SMC3Q9UQE7 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SMC3Q9UQE7 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SMC3Q9UQE7 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.94□□□□□ -1.94
SMC3Q9UQE7 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SMC3Q9UQE7 RNU4-68P-201ENST00000364314 141 ntBASIC2.94□□□□□ -1.94
SMC3Q9UQE7 Y_RNA.311-201ENST00000365068 96 ntBASIC2.94□□□□□ -1.94
SMC3Q9UQE7 Y_RNA.333-201ENST00000365274 102 ntBASIC2.94□□□□□ -1.94
SMC3Q9UQE7 MIR483-201ENST00000385070 76 ntBASIC2.94□□□□□ -1.94
SMC3Q9UQE7 AC106883.1-201ENST00000418805 562 ntBASIC2.94□□□□□ -1.94
SMC3Q9UQE7 MTCO2P17-201ENST00000424336 677 ntBASIC2.94□□□□□ -1.94
SMC3Q9UQE7 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC2.94□□□□□ -1.94
SMC3Q9UQE7 MTCYBP45-201ENST00000435243 565 ntBASIC2.94□□□□□ -1.94
SMC3Q9UQE7 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.94□□□□□ -1.94
SMC3Q9UQE7 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SMC3Q9UQE7 MTND1P16-201ENST00000465177 898 ntBASIC2.94□□□□□ -1.94
SMC3Q9UQE7 RPL31P41-201ENST00000477967 372 ntBASIC2.94□□□□□ -1.94
SMC3Q9UQE7 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.94□□□□□ -1.94
SMC3Q9UQE7 AC109445.1-201ENST00000512356 383 ntBASIC2.94□□□□□ -1.94
SMC3Q9UQE7 AC017037.2-201ENST00000513850 890 ntBASIC2.94□□□□□ -1.94
SMC3Q9UQE7 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.94□□□□□ -1.94
SMC3Q9UQE7 RN7SKP132-201ENST00000516001 208 ntBASIC2.94□□□□□ -1.94
SMC3Q9UQE7 RNU6-1282P-201ENST00000516735 96 ntBASIC2.94□□□□□ -1.94
SMC3Q9UQE7 SCARNA1-201ENST00000517138 166 ntBASIC2.94□□□□□ -1.94
SMC3Q9UQE7 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.94□□□□□ -1.94
SMC3Q9UQE7 COX6CP8-201ENST00000522620 226 ntBASIC2.94□□□□□ -1.94
SMC3Q9UQE7 SUB1P1-201ENST00000524415 382 ntBASIC2.94□□□□□ -1.94
SMC3Q9UQE7 OR5BN1P-201ENST00000532955 829 ntBASIC2.94□□□□□ -1.94
SMC3Q9UQE7 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.94□□□□□ -1.94
SMC3Q9UQE7 MIR4760-201ENST00000585040 80 ntBASIC2.94□□□□□ -1.94
SMC3Q9UQE7 AP001269.3-201ENST00000588718 329 ntBASIC2.94□□□□□ -1.94
SMC3Q9UQE7 OR1M4P-201ENST00000589199 287 ntBASIC2.94□□□□□ -1.94
SMC3Q9UQE7 AC013553.2-201ENST00000604244 589 ntBASIC2.94□□□□□ -1.94
SMC3Q9UQE7 AC007619.2-201ENST00000605743 379 ntBASIC2.94□□□□□ -1.94
SMC3Q9UQE7 AL357080.1-201ENST00000617394 239 ntBASIC2.94□□□□□ -1.94
SMC3Q9UQE7 MIR6130-201ENST00000619419 109 ntBASIC2.94□□□□□ -1.94
SMC3Q9UQE7 UCA1.1-201ENST00000620952 75 ntBASIC2.94□□□□□ -1.94
SMC3Q9UQE7 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.94□□□□□ -1.94
SMC3Q9UQE7 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.94□□□□□ -1.94
SMC3Q9UQE7 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
SMC3Q9UQE7 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SMC3Q9UQE7 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.93□□□□□ -1.94
SMC3Q9UQE7 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
SMC3Q9UQE7 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SMC3Q9UQE7 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SMC3Q9UQE7 RNU6-859P-201ENST00000362728 107 ntBASIC2.93□□□□□ -1.94
SMC3Q9UQE7 U8.8-201ENST00000365399 135 ntBASIC2.93□□□□□ -1.94
SMC3Q9UQE7 RNU6-1035P-201ENST00000384477 107 ntBASIC2.93□□□□□ -1.94
SMC3Q9UQE7 Y_RNA.548-201ENST00000384656 105 ntBASIC2.93□□□□□ -1.94
SMC3Q9UQE7 MIR491-201ENST00000384877 84 ntBASIC2.93□□□□□ -1.94
SMC3Q9UQE7 MIR513B-201ENST00000385136 84 ntBASIC2.93□□□□□ -1.94
SMC3Q9UQE7 AL513475.1-201ENST00000406602 315 ntBASIC2.93□□□□□ -1.94
SMC3Q9UQE7 RNU6-584P-201ENST00000410350 95 ntBASIC2.93□□□□□ -1.94
SMC3Q9UQE7 CCDC58P2-201ENST00000417131 366 ntBASIC2.93□□□□□ -1.94
SMC3Q9UQE7 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.93□□□□□ -1.94
SMC3Q9UQE7 AL356867.1-201ENST00000429623 299 ntBASIC2.93□□□□□ -1.94
SMC3Q9UQE7 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.93□□□□□ -1.94
SMC3Q9UQE7 Z80107.1-201ENST00000436830 412 ntBASIC2.93□□□□□ -1.94
SMC3Q9UQE7 AL109741.2-201ENST00000455561 343 ntBASIC2.93□□□□□ -1.94
SMC3Q9UQE7 RNU7-136P-201ENST00000458819 69 ntBASIC2.93□□□□□ -1.94
SMC3Q9UQE7 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.93□□□□□ -1.94
SMC3Q9UQE7 AC020699.1-201ENST00000505161 445 ntBASIC2.93□□□□□ -1.94
SMC3Q9UQE7 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.93□□□□□ -1.94
SMC3Q9UQE7 AC079395.1-201ENST00000510981 262 ntBASIC2.93□□□□□ -1.94
SMC3Q9UQE7 MTND2P32-201ENST00000521584 1038 ntBASIC2.93□□□□□ -1.94
SMC3Q9UQE7 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.93□□□□□ -1.94
SMC3Q9UQE7 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.93□□□□□ -1.94
SMC3Q9UQE7 MYL12BP1-201ENST00000569826 507 ntBASIC2.93□□□□□ -1.94
SMC3Q9UQE7 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.93□□□□□ -1.94
SMC3Q9UQE7 AC079597.1-201ENST00000624306 508 ntBASIC2.93□□□□□ -1.94
SMC3Q9UQE7 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.93□□□□□ -1.94
SMC3Q9UQE7 OR5H6-203ENST00000642105 978 ntBASIC2.93□□□□□ -1.94
SMC3Q9UQE7 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.93□□□□□ -1.94
SMC3Q9UQE7 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
SMC3Q9UQE7 AC099786.3-201ENST00000565735 1410 ntBASIC2.93□□□□□ -1.94
SMC3Q9UQE7 CR848007.1-201ENST00000442354 1699 ntBASIC2.92□□□□□ -1.94
SMC3Q9UQE7 RNU5A-1-201ENST00000362698 116 ntBASIC2.92□□□□□ -1.94
SMC3Q9UQE7 RNU6-461P-201ENST00000364195 107 ntBASIC2.92□□□□□ -1.94
SMC3Q9UQE7 RNU6-621P-201ENST00000364752 109 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms