Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HDAC9Q9UKV0 RNU5E-1-201ENST00000362477 120 ntBASIC4.23□□□□□ -1.73
HDAC9Q9UKV0 RNU6-7-201ENST00000364784 107 ntBASIC4.23□□□□□ -1.73
HDAC9Q9UKV0 RNA5SP126-201ENST00000365092 109 ntBASIC4.23□□□□□ -1.73
HDAC9Q9UKV0 RNU6-8-201ENST00000365467 107 ntBASIC4.23□□□□□ -1.73
HDAC9Q9UKV0 MIR19A-201ENST00000384878 82 ntBASIC4.23□□□□□ -1.73
HDAC9Q9UKV0 RPL23AP32-201ENST00000395315 459 ntBASIC4.23□□□□□ -1.73
HDAC9Q9UKV0 MTND3P17-201ENST00000416968 344 ntBASIC4.23□□□□□ -1.73
HDAC9Q9UKV0 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.23□□□□□ -1.73
HDAC9Q9UKV0 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.23□□□□□ -1.73
HDAC9Q9UKV0 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.23□□□□□ -1.73
HDAC9Q9UKV0 MTND4LP10-201ENST00000435146 291 ntBASIC4.23□□□□□ -1.73
HDAC9Q9UKV0 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.23□□□□□ -1.73
HDAC9Q9UKV0 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.23□□□□□ -1.73
HDAC9Q9UKV0 RPS3AP17-201ENST00000472594 777 ntBASIC4.23□□□□□ -1.73
HDAC9Q9UKV0 RBM43P1-201ENST00000476891 1081 ntBASIC4.23□□□□□ -1.73
HDAC9Q9UKV0 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.23□□□□□ -1.73
HDAC9Q9UKV0 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.23□□□□□ -1.73
HDAC9Q9UKV0 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.23□□□□□ -1.73
HDAC9Q9UKV0 RNU1-61P-201ENST00000516107 151 ntBASIC4.23□□□□□ -1.73
HDAC9Q9UKV0 RNU6-506P-201ENST00000516553 94 ntBASIC4.23□□□□□ -1.73
HDAC9Q9UKV0 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.23□□□□□ -1.73
HDAC9Q9UKV0 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.23□□□□□ -1.73
HDAC9Q9UKV0 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.23□□□□□ -1.73
HDAC9Q9UKV0 AC020914.4-201ENST00000597690 277 ntBASIC4.23□□□□□ -1.73
HDAC9Q9UKV0 AC011451.2-201ENST00000604303 598 ntBASIC4.23□□□□□ -1.73
HDAC9Q9UKV0 AC121334.2-201ENST00000605387 271 ntBASIC4.23□□□□□ -1.73
HDAC9Q9UKV0 AC126118.1-201ENST00000607744 628 ntBASIC4.23□□□□□ -1.73
HDAC9Q9UKV0 AC068880.5-201ENST00000624331 290 ntBASIC4.23□□□□□ -1.73
HDAC9Q9UKV0 AL136164.4-201ENST00000625013 2135 ntBASIC4.23□□□□□ -1.73
HDAC9Q9UKV0 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HDAC9Q9UKV0 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HDAC9Q9UKV0 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
HDAC9Q9UKV0 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HDAC9Q9UKV0 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.22□□□□□ -1.73
HDAC9Q9UKV0 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HDAC9Q9UKV0 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
HDAC9Q9UKV0 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HDAC9Q9UKV0 RNA5SP374-201ENST00000362939 125 ntBASIC4.22□□□□□ -1.73
HDAC9Q9UKV0 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.22□□□□□ -1.73
HDAC9Q9UKV0 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.22□□□□□ -1.73
HDAC9Q9UKV0 BX323014.1-201ENST00000412876 237 ntBASIC4.22□□□□□ -1.73
HDAC9Q9UKV0 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.22□□□□□ -1.73
HDAC9Q9UKV0 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.22□□□□□ -1.73
HDAC9Q9UKV0 AC233728.2-201ENST00000425348 757 ntBASIC4.22□□□□□ -1.73
HDAC9Q9UKV0 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.22□□□□□ -1.73
HDAC9Q9UKV0 AL358934.1-201ENST00000432346 324 ntBASIC4.22□□□□□ -1.73
HDAC9Q9UKV0 MTND3P21-201ENST00000433774 331 ntBASIC4.22□□□□□ -1.73
HDAC9Q9UKV0 AC104850.1-201ENST00000435940 476 ntBASIC4.22□□□□□ -1.73
HDAC9Q9UKV0 AC006028.1-201ENST00000438379 402 ntBASIC4.22□□□□□ -1.73
HDAC9Q9UKV0 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.22□□□□□ -1.73
HDAC9Q9UKV0 MTND1P9-201ENST00000453775 944 ntBASIC4.22□□□□□ -1.73
HDAC9Q9UKV0 AL359385.1-201ENST00000456509 365 ntBASIC4.22□□□□□ -1.73
HDAC9Q9UKV0 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.22□□□□□ -1.73
HDAC9Q9UKV0 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.22□□□□□ -1.73
HDAC9Q9UKV0 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.22□□□□□ -1.73
HDAC9Q9UKV0 RNU6-1095P-201ENST00000516148 108 ntBASIC4.22□□□□□ -1.73
HDAC9Q9UKV0 RNU6-579P-201ENST00000516879 102 ntBASIC4.22□□□□□ -1.73
HDAC9Q9UKV0 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.22□□□□□ -1.73
HDAC9Q9UKV0 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.22□□□□□ -1.73
HDAC9Q9UKV0 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC4.22□□□□□ -1.73
HDAC9Q9UKV0 AL391840.1-201ENST00000571144 367 ntBASIC4.22□□□□□ -1.73
HDAC9Q9UKV0 MIR4644-201ENST00000579929 84 ntBASIC4.22□□□□□ -1.73
HDAC9Q9UKV0 MTATP6P3-201ENST00000581686 676 ntBASIC4.22□□□□□ -1.73
HDAC9Q9UKV0 AC068790.3-201ENST00000602988 553 ntBASIC4.22□□□□□ -1.73
HDAC9Q9UKV0 AC136601.2-201ENST00000604356 474 ntBASIC4.22□□□□□ -1.73
HDAC9Q9UKV0 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.22□□□□□ -1.73
HDAC9Q9UKV0 AC007684.1-201ENST00000609671 477 ntBASIC4.22□□□□□ -1.73
HDAC9Q9UKV0 AL159972.1-201ENST00000625150 448 ntBASIC4.22□□□□□ -1.73
HDAC9Q9UKV0 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HDAC9Q9UKV0 AL138713.1-201ENST00000624026 2130 ntBASIC4.22□□□□□ -1.73
HDAC9Q9UKV0 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HDAC9Q9UKV0 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
HDAC9Q9UKV0 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
HDAC9Q9UKV0 FRG1CP-201ENST00000358464 769 ntBASIC4.21□□□□□ -1.74
HDAC9Q9UKV0 RNA5SP322-201ENST00000363617 119 ntBASIC4.21□□□□□ -1.74
HDAC9Q9UKV0 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
HDAC9Q9UKV0 RN7SKP111-201ENST00000410349 271 ntBASIC4.21□□□□□ -1.74
HDAC9Q9UKV0 PIGFP2-201ENST00000421400 651 ntBASIC4.21□□□□□ -1.74
HDAC9Q9UKV0 NDUFB1P1-201ENST00000435191 180 ntBASIC4.21□□□□□ -1.74
HDAC9Q9UKV0 RAC1P7-201ENST00000445367 377 ntBASIC4.21□□□□□ -1.74
HDAC9Q9UKV0 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.21□□□□□ -1.74
HDAC9Q9UKV0 TPT1P14-201ENST00000448018 505 ntBASIC4.21□□□□□ -1.74
HDAC9Q9UKV0 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.21□□□□□ -1.74
HDAC9Q9UKV0 S100A11P2-201ENST00000467589 312 ntBASIC4.21□□□□□ -1.74
HDAC9Q9UKV0 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.21□□□□□ -1.74
HDAC9Q9UKV0 AC126182.1-201ENST00000478134 357 ntBASIC4.21□□□□□ -1.74
HDAC9Q9UKV0 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.21□□□□□ -1.74
HDAC9Q9UKV0 RPL7P47-201ENST00000497299 556 ntBASIC4.21□□□□□ -1.74
HDAC9Q9UKV0 BTF3L4P4-201ENST00000506381 449 ntBASIC4.21□□□□□ -1.74
HDAC9Q9UKV0 IGKV2-26-201ENST00000518305 343 ntBASIC4.21□□□□□ -1.74
HDAC9Q9UKV0 DEFB108A-201ENST00000530110 222 ntBASIC4.21□□□□□ -1.74
HDAC9Q9UKV0 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.21□□□□□ -1.74
HDAC9Q9UKV0 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.21□□□□□ -1.74
HDAC9Q9UKV0 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.21□□□□□ -1.74
HDAC9Q9UKV0 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.21□□□□□ -1.74
HDAC9Q9UKV0 OR4T1P-201ENST00000554933 911 ntBASIC4.21□□□□□ -1.74
HDAC9Q9UKV0 AC136619.2-201ENST00000563361 631 ntBASIC4.21□□□□□ -1.74
HDAC9Q9UKV0 MIR3146-201ENST00000580367 79 ntBASIC4.21□□□□□ -1.74
HDAC9Q9UKV0 AL606834.2-201ENST00000602954 668 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms