Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.88□□□□□ -2.11
VPS29Q9UBQ0 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
VPS29Q9UBQ0 SNORA16B-201ENST00000364674 135 ntBASIC1.88□□□□□ -2.11
VPS29Q9UBQ0 SNORD116-23-201ENST00000384645 92 ntBASIC1.88□□□□□ -2.11
VPS29Q9UBQ0 TMSB4XP8-201ENST00000402089 135 ntBASIC1.88□□□□□ -2.11
VPS29Q9UBQ0 TMSB4XP6-201ENST00000415187 135 ntBASIC1.88□□□□□ -2.11
VPS29Q9UBQ0 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.88□□□□□ -2.11
VPS29Q9UBQ0 TMSB4XP1-201ENST00000424567 135 ntBASIC1.88□□□□□ -2.11
VPS29Q9UBQ0 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC1.88□□□□□ -2.11
VPS29Q9UBQ0 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.88□□□□□ -2.11
VPS29Q9UBQ0 Z98742.2-201ENST00000431564 187 ntBASIC1.88□□□□□ -2.11
VPS29Q9UBQ0 AC236972.1-201ENST00000433225 199 ntBASIC1.88□□□□□ -2.11
VPS29Q9UBQ0 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.88□□□□□ -2.11
VPS29Q9UBQ0 AL049734.2-201ENST00000441066 616 ntBASIC1.88□□□□□ -2.11
VPS29Q9UBQ0 AC114878.1-201ENST00000441166 358 ntBASIC1.88□□□□□ -2.11
VPS29Q9UBQ0 GPM6BP3-201ENST00000442797 145 ntBASIC1.88□□□□□ -2.11
VPS29Q9UBQ0 FAM103A2P-201ENST00000444122 354 ntBASIC1.88□□□□□ -2.11
VPS29Q9UBQ0 MTCO1P48-201ENST00000448024 1096 ntBASIC1.88□□□□□ -2.11
VPS29Q9UBQ0 KLF3P2-201ENST00000465138 268 ntBASIC1.88□□□□□ -2.11
VPS29Q9UBQ0 UBE2DNL-203ENST00000474922 222 ntBASIC1.88□□□□□ -2.11
VPS29Q9UBQ0 AL049874.1-201ENST00000489560 388 ntBASIC1.88□□□□□ -2.11
VPS29Q9UBQ0 AC138853.1-201ENST00000503549 823 ntBASIC1.88□□□□□ -2.11
VPS29Q9UBQ0 COX7A2P2-201ENST00000505291 250 ntBASIC1.88□□□□□ -2.11
VPS29Q9UBQ0 AC008549.1-201ENST00000512900 643 ntBASIC1.88□□□□□ -2.11
VPS29Q9UBQ0 AC119751.5-201ENST00000514077 770 ntBASIC1.88□□□□□ -2.11
VPS29Q9UBQ0 RNU5F-8P-201ENST00000515941 111 ntBASIC1.88□□□□□ -2.11
VPS29Q9UBQ0 FAM92A1P1-201ENST00000528023 890 ntBASIC1.88□□□□□ -2.11
VPS29Q9UBQ0 AC124947.2-202ENST00000552735 133 ntBASIC1.88□□□□□ -2.11
VPS29Q9UBQ0 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.88□□□□□ -2.11
VPS29Q9UBQ0 AL138976.2-201ENST00000563989 694 ntBASIC1.88□□□□□ -2.11
VPS29Q9UBQ0 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.88□□□□□ -2.11
VPS29Q9UBQ0 AC093519.1-201ENST00000566109 298 ntBASIC1.88□□□□□ -2.11
VPS29Q9UBQ0 MIR3935-201ENST00000583472 104 ntBASIC1.88□□□□□ -2.11
VPS29Q9UBQ0 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC1.88□□□□□ -2.11
VPS29Q9UBQ0 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC1.88□□□□□ -2.11
VPS29Q9UBQ0 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.88□□□□□ -2.11
VPS29Q9UBQ0 BNIP3P19-201ENST00000605397 577 ntBASIC1.88□□□□□ -2.11
VPS29Q9UBQ0 AP001521.1-201ENST00000609150 300 ntBASIC1.88□□□□□ -2.11
VPS29Q9UBQ0 AC098657.3-201ENST00000620434 263 ntBASIC1.88□□□□□ -2.11
VPS29Q9UBQ0 AC068057.2-201ENST00000624047 895 ntBASIC1.88□□□□□ -2.11
VPS29Q9UBQ0 AC106730.3-201ENST00000624568 641 ntBASIC1.88□□□□□ -2.11
VPS29Q9UBQ0 AC132825.7-201ENST00000638744 335 ntBASIC1.88□□□□□ -2.11
VPS29Q9UBQ0 AC004944.1-201ENST00000517807 3059 ntBASIC1.88□□□□□ -2.11
VPS29Q9UBQ0 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
VPS29Q9UBQ0 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
VPS29Q9UBQ0 RNU6-582P-201ENST00000362989 107 ntBASIC1.87□□□□□ -2.11
VPS29Q9UBQ0 SNORD56.4-201ENST00000363883 71 ntBASIC1.87□□□□□ -2.11
VPS29Q9UBQ0 AL445529.1-201ENST00000398713 389 ntBASIC1.87□□□□□ -2.11
VPS29Q9UBQ0 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.87□□□□□ -2.11
VPS29Q9UBQ0 RPL17P12-201ENST00000413391 526 ntBASIC1.87□□□□□ -2.11
VPS29Q9UBQ0 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.87□□□□□ -2.11
VPS29Q9UBQ0 AC002542.1-201ENST00000440683 193 ntBASIC1.87□□□□□ -2.11
VPS29Q9UBQ0 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
VPS29Q9UBQ0 AC105252.1-201ENST00000503089 286 ntBASIC1.87□□□□□ -2.11
VPS29Q9UBQ0 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.87□□□□□ -2.11
VPS29Q9UBQ0 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.87□□□□□ -2.11
VPS29Q9UBQ0 AC010486.1-201ENST00000511793 424 ntBASIC1.87□□□□□ -2.11
VPS29Q9UBQ0 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.87□□□□□ -2.11
VPS29Q9UBQ0 SCARNA15.2-201ENST00000516409 127 ntBASIC1.87□□□□□ -2.11
VPS29Q9UBQ0 RNU6-885P-201ENST00000516607 104 ntBASIC1.87□□□□□ -2.11
VPS29Q9UBQ0 RNU7-193P-201ENST00000516723 65 ntBASIC1.87□□□□□ -2.11
VPS29Q9UBQ0 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC1.87□□□□□ -2.11
VPS29Q9UBQ0 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC1.87□□□□□ -2.11
VPS29Q9UBQ0 AC025755.1-201ENST00000521306 278 ntBASIC1.87□□□□□ -2.11
VPS29Q9UBQ0 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.87□□□□□ -2.11
VPS29Q9UBQ0 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.87□□□□□ -2.11
VPS29Q9UBQ0 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.87□□□□□ -2.11
VPS29Q9UBQ0 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.87□□□□□ -2.11
VPS29Q9UBQ0 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.87□□□□□ -2.11
VPS29Q9UBQ0 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.87□□□□□ -2.11
VPS29Q9UBQ0 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.87□□□□□ -2.11
VPS29Q9UBQ0 AC021749.1-201ENST00000604322 607 ntBASIC1.87□□□□□ -2.11
VPS29Q9UBQ0 AL450336.1-201ENST00000605180 586 ntBASIC1.87□□□□□ -2.11
VPS29Q9UBQ0 AC008498.1-201ENST00000613012 531 ntBASIC1.87□□□□□ -2.11
VPS29Q9UBQ0 AL136981.2-201ENST00000617319 734 ntBASIC1.87□□□□□ -2.11
VPS29Q9UBQ0 MFSD8-213ENST00000641134 1327 ntBASIC1.87□□□□□ -2.11
VPS29Q9UBQ0 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.86□□□□□ -2.11
VPS29Q9UBQ0 MIR514A1-201ENST00000385133 98 ntBASIC1.86□□□□□ -2.11
VPS29Q9UBQ0 RNU2-2P-201ENST00000410396 191 ntBASIC1.86□□□□□ -2.11
VPS29Q9UBQ0 RNU2-40P-201ENST00000410833 196 ntBASIC1.86□□□□□ -2.11
VPS29Q9UBQ0 AL356379.1-201ENST00000414105 126 ntBASIC1.86□□□□□ -2.11
VPS29Q9UBQ0 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC1.86□□□□□ -2.11
VPS29Q9UBQ0 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.86□□□□□ -2.11
VPS29Q9UBQ0 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.86□□□□□ -2.11
VPS29Q9UBQ0 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.86□□□□□ -2.11
VPS29Q9UBQ0 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.86□□□□□ -2.11
VPS29Q9UBQ0 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.86□□□□□ -2.11
VPS29Q9UBQ0 AC090515.1-201ENST00000465295 476 ntBASIC1.86□□□□□ -2.11
VPS29Q9UBQ0 DYNLL1P5-201ENST00000467158 270 ntBASIC1.86□□□□□ -2.11
VPS29Q9UBQ0 LARP1BP2-201ENST00000486594 519 ntBASIC1.86□□□□□ -2.11
VPS29Q9UBQ0 MTAPP1-201ENST00000489154 819 ntBASIC1.86□□□□□ -2.11
VPS29Q9UBQ0 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.86□□□□□ -2.11
VPS29Q9UBQ0 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.86□□□□□ -2.11
VPS29Q9UBQ0 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.86□□□□□ -2.11
VPS29Q9UBQ0 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.86□□□□□ -2.11
VPS29Q9UBQ0 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.86□□□□□ -2.11
VPS29Q9UBQ0 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.86□□□□□ -2.11
VPS29Q9UBQ0 AC068313.1-201ENST00000604028 1008 ntBASIC1.86□□□□□ -2.11
VPS29Q9UBQ0 AC080013.4-201ENST00000607624 649 ntBASIC1.86□□□□□ -2.11
VPS29Q9UBQ0 AC107214.2-201ENST00000608204 634 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 155.2 ms