Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.12□□□□□ -1.59
USP35Q9P2H5 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.12□□□□□ -1.59
USP35Q9P2H5 RNU6-1092P-201ENST00000516955 87 ntBASIC5.12□□□□□ -1.59
USP35Q9P2H5 RNU6-1231P-201ENST00000517185 103 ntBASIC5.12□□□□□ -1.59
USP35Q9P2H5 OR5G4P-201ENST00000525251 760 ntBASIC5.12□□□□□ -1.59
USP35Q9P2H5 AP003392.2-201ENST00000527269 208 ntBASIC5.12□□□□□ -1.59
USP35Q9P2H5 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC5.12□□□□□ -1.59
USP35Q9P2H5 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC5.12□□□□□ -1.59
USP35Q9P2H5 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC5.12□□□□□ -1.59
USP35Q9P2H5 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC5.12□□□□□ -1.59
USP35Q9P2H5 AC004223.2-201ENST00000590309 544 ntBASIC5.12□□□□□ -1.59
USP35Q9P2H5 AC013553.2-201ENST00000604244 589 ntBASIC5.12□□□□□ -1.59
USP35Q9P2H5 AP002360.4-201ENST00000606980 481 ntBASIC5.12□□□□□ -1.59
USP35Q9P2H5 AC098614.4-201ENST00000607601 462 ntBASIC5.12□□□□□ -1.59
USP35Q9P2H5 AP005264.7-201ENST00000625003 745 ntBASIC5.12□□□□□ -1.59
USP35Q9P2H5 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
USP35Q9P2H5 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC5.12□□□□□ -1.59
USP35Q9P2H5 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC5.12□□□□□ -1.59
USP35Q9P2H5 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC5.12□□□□□ -1.59
USP35Q9P2H5 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
USP35Q9P2H5 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
USP35Q9P2H5 RNU6-169P-201ENST00000365336 107 ntBASIC5.11□□□□□ -1.59
USP35Q9P2H5 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
USP35Q9P2H5 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
USP35Q9P2H5 AC096664.2-201ENST00000411843 406 ntBASIC5.11□□□□□ -1.59
USP35Q9P2H5 TMEM167AP1-201ENST00000423409 219 ntBASIC5.11□□□□□ -1.59
USP35Q9P2H5 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.11□□□□□ -1.59
USP35Q9P2H5 HMGB3P12-201ENST00000438745 556 ntBASIC5.11□□□□□ -1.59
USP35Q9P2H5 RPS3AP46-201ENST00000448352 682 ntBASIC5.11□□□□□ -1.59
USP35Q9P2H5 OFD1P4Y-201ENST00000455273 1179 ntBASIC5.11□□□□□ -1.59
USP35Q9P2H5 AC013267.1-201ENST00000458227 267 ntBASIC5.11□□□□□ -1.59
USP35Q9P2H5 AC105252.1-201ENST00000503089 286 ntBASIC5.11□□□□□ -1.59
USP35Q9P2H5 MGST1-215ENST00000540056 546 ntTSL 3 BASIC5.11□□□□□ -1.59
USP35Q9P2H5 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.11□□□□□ -1.59
USP35Q9P2H5 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC5.11□□□□□ -1.59
USP35Q9P2H5 AC010546.1-201ENST00000569391 485 ntBASIC5.11□□□□□ -1.59
USP35Q9P2H5 MTND1P15-201ENST00000579262 949 ntBASIC5.11□□□□□ -1.59
USP35Q9P2H5 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC5.11□□□□□ -1.59
USP35Q9P2H5 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC5.11□□□□□ -1.59
USP35Q9P2H5 MIR98-201ENST00000606724 119 ntBASIC5.11□□□□□ -1.59
USP35Q9P2H5 AC136475.10-201ENST00000620253 385 ntBASIC5.11□□□□□ -1.59
USP35Q9P2H5 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
USP35Q9P2H5 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC5.11□□□□□ -1.59
USP35Q9P2H5 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC5.11□□□□□ -1.59
USP35Q9P2H5 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
USP35Q9P2H5 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
USP35Q9P2H5 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC5.1□□□□□ -1.59
USP35Q9P2H5 AC073343.1-201ENST00000328239 651 ntBASIC5.1□□□□□ -1.59
USP35Q9P2H5 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
USP35Q9P2H5 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
USP35Q9P2H5 RNU6-741P-201ENST00000383889 107 ntBASIC5.1□□□□□ -1.59
USP35Q9P2H5 NDUFS5P1-201ENST00000405668 289 ntBASIC5.1□□□□□ -1.59
USP35Q9P2H5 AC092447.7-201ENST00000422212 1621 ntBASIC5.1□□□□□ -1.59
USP35Q9P2H5 MED13P1-201ENST00000428342 171 ntBASIC5.1□□□□□ -1.59
USP35Q9P2H5 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC5.1□□□□□ -1.59
USP35Q9P2H5 FCF1P1-201ENST00000432690 571 ntBASIC5.1□□□□□ -1.59
USP35Q9P2H5 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC5.1□□□□□ -1.59
USP35Q9P2H5 RPL36AP6-201ENST00000435770 321 ntBASIC5.1□□□□□ -1.59
USP35Q9P2H5 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
USP35Q9P2H5 AC079448.1-201ENST00000449377 373 ntBASIC5.1□□□□□ -1.59
USP35Q9P2H5 SNRPGP6-201ENST00000451124 220 ntBASIC5.1□□□□□ -1.59
USP35Q9P2H5 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC5.1□□□□□ -1.59
USP35Q9P2H5 AC087588.1-201ENST00000462203 316 ntBASIC5.1□□□□□ -1.59
USP35Q9P2H5 AC023598.1-201ENST00000472521 361 ntBASIC5.1□□□□□ -1.59
USP35Q9P2H5 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC5.1□□□□□ -1.59
USP35Q9P2H5 AC091133.4-201ENST00000511142 308 ntBASIC5.1□□□□□ -1.59
USP35Q9P2H5 SNORA31.3-201ENST00000516029 96 ntBASIC5.1□□□□□ -1.59
USP35Q9P2H5 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
USP35Q9P2H5 NACA-211ENST00000548563 827 ntTSL 5 BASIC5.1□□□□□ -1.59
USP35Q9P2H5 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC5.1□□□□□ -1.59
USP35Q9P2H5 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC5.1□□□□□ -1.59
USP35Q9P2H5 GLUD1P4-201ENST00000590914 418 ntBASIC5.1□□□□□ -1.59
USP35Q9P2H5 AC002545.1-201ENST00000592511 181 ntBASIC5.1□□□□□ -1.59
USP35Q9P2H5 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC5.1□□□□□ -1.59
USP35Q9P2H5 PSMD5-AS1-215ENST00000640622 205 ntBASIC5.1□□□□□ -1.59
USP35Q9P2H5 AF117829.1-206ENST00000621883 3802 ntBASIC5.1□□□□□ -1.59
USP35Q9P2H5 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
USP35Q9P2H5 OR5J1P-201ENST00000313544 939 ntBASIC5.09□□□□□ -1.59
USP35Q9P2H5 RNA5SP50-201ENST00000363731 107 ntBASIC5.09□□□□□ -1.59
USP35Q9P2H5 SNORA1.3-201ENST00000384676 136 ntBASIC5.09□□□□□ -1.59
USP35Q9P2H5 MIR558-201ENST00000384920 94 ntBASIC5.09□□□□□ -1.59
USP35Q9P2H5 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
USP35Q9P2H5 Z85995.1-201ENST00000415547 335 ntBASIC5.09□□□□□ -1.59
USP35Q9P2H5 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC5.09□□□□□ -1.59
USP35Q9P2H5 MTATP6P30-201ENST00000443540 664 ntBASIC5.09□□□□□ -1.59
USP35Q9P2H5 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC5.09□□□□□ -1.59
USP35Q9P2H5 MTCO3P20-201ENST00000454926 688 ntBASIC5.09□□□□□ -1.59
USP35Q9P2H5 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC5.09□□□□□ -1.59
USP35Q9P2H5 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC5.09□□□□□ -1.59
USP35Q9P2H5 MTND2P33-201ENST00000506452 1031 ntBASIC5.09□□□□□ -1.59
USP35Q9P2H5 RPL23AP94-201ENST00000512518 302 ntBASIC5.09□□□□□ -1.59
USP35Q9P2H5 AC090572.1-201ENST00000519251 160 ntBASIC5.09□□□□□ -1.59
USP35Q9P2H5 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC5.09□□□□□ -1.59
USP35Q9P2H5 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC5.09□□□□□ -1.59
USP35Q9P2H5 AC027807.1-201ENST00000559921 996 ntBASIC5.09□□□□□ -1.59
USP35Q9P2H5 AC078795.2-201ENST00000602835 1252 ntBASIC5.09□□□□□ -1.59
USP35Q9P2H5 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
USP35Q9P2H5 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
USP35Q9P2H5 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
USP35Q9P2H5 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC5.09□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms