Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
PHRF1Q9P1Y6 SNORA40.6-201ENST00000391153 128 ntBASIC1.77□□□□□ -2.13
PHRF1Q9P1Y6 AL138880.1-201ENST00000405824 642 ntBASIC1.77□□□□□ -2.13
PHRF1Q9P1Y6 AC241520.1-201ENST00000422654 1099 ntBASIC1.77□□□□□ -2.13
PHRF1Q9P1Y6 AL392003.1-201ENST00000434394 243 ntBASIC1.77□□□□□ -2.13
PHRF1Q9P1Y6 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.77□□□□□ -2.13
PHRF1Q9P1Y6 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.77□□□□□ -2.13
PHRF1Q9P1Y6 ARL5AP3-201ENST00000439327 386 ntBASIC1.77□□□□□ -2.13
PHRF1Q9P1Y6 HMGN2P16-201ENST00000456802 261 ntBASIC1.77□□□□□ -2.13
PHRF1Q9P1Y6 KATNBL1P4-201ENST00000503545 918 ntBASIC1.77□□□□□ -2.13
PHRF1Q9P1Y6 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC1.77□□□□□ -2.13
PHRF1Q9P1Y6 AF279873.1-201ENST00000523393 313 ntBASIC1.77□□□□□ -2.13
PHRF1Q9P1Y6 AC025857.1-201ENST00000525252 377 ntBASIC1.77□□□□□ -2.13
PHRF1Q9P1Y6 MIR4285-201ENST00000581001 85 ntBASIC1.77□□□□□ -2.13
PHRF1Q9P1Y6 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.77□□□□□ -2.13
PHRF1Q9P1Y6 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.77□□□□□ -2.13
PHRF1Q9P1Y6 AP000560.1-201ENST00000624150 1937 ntBASIC1.77□□□□□ -2.13
PHRF1Q9P1Y6 AP001350.1-201ENST00000601906 1524 ntBASIC1.77□□□□□ -2.13
PHRF1Q9P1Y6 RNU6-1180P-201ENST00000364935 107 ntBASIC1.77□□□□□ -2.13
PHRF1Q9P1Y6 RNA5SP363-201ENST00000365072 115 ntBASIC1.77□□□□□ -2.13
PHRF1Q9P1Y6 SNORA6-201ENST00000384033 151 ntBASIC1.77□□□□□ -2.13
PHRF1Q9P1Y6 RNU6-629P-201ENST00000384061 103 ntBASIC1.77□□□□□ -2.13
PHRF1Q9P1Y6 RNU2-21P-201ENST00000410368 188 ntBASIC1.77□□□□□ -2.13
PHRF1Q9P1Y6 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC1.77□□□□□ -2.13
PHRF1Q9P1Y6 RPL21P134-201ENST00000453468 483 ntBASIC1.77□□□□□ -2.13
PHRF1Q9P1Y6 AC110792.2-201ENST00000510278 224 ntBASIC1.77□□□□□ -2.13
PHRF1Q9P1Y6 RNA5SP436-201ENST00000516020 115 ntBASIC1.77□□□□□ -2.13
PHRF1Q9P1Y6 RNU6-491P-201ENST00000516099 110 ntBASIC1.77□□□□□ -2.13
PHRF1Q9P1Y6 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.77□□□□□ -2.13
PHRF1Q9P1Y6 AP001804.3-201ENST00000525146 880 ntBASIC1.77□□□□□ -2.13
PHRF1Q9P1Y6 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.77□□□□□ -2.13
PHRF1Q9P1Y6 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.77□□□□□ -2.13
PHRF1Q9P1Y6 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.77□□□□□ -2.13
PHRF1Q9P1Y6 AL109653.1-201ENST00000603091 248 ntBASIC1.77□□□□□ -2.13
PHRF1Q9P1Y6 AC008121.3-201ENST00000618726 433 ntBASIC1.77□□□□□ -2.13
PHRF1Q9P1Y6 PABPC1P7-201ENST00000413177 1513 ntBASIC1.76□□□□□ -2.13
PHRF1Q9P1Y6 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
PHRF1Q9P1Y6 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
PHRF1Q9P1Y6 Y_RNA.205-201ENST00000364128 113 ntBASIC1.76□□□□□ -2.13
PHRF1Q9P1Y6 RNU6-234P-201ENST00000365229 104 ntBASIC1.76□□□□□ -2.13
PHRF1Q9P1Y6 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
PHRF1Q9P1Y6 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC1.76□□□□□ -2.13
PHRF1Q9P1Y6 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC1.76□□□□□ -2.13
PHRF1Q9P1Y6 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
PHRF1Q9P1Y6 NF1P3-201ENST00000457709 450 ntBASIC1.76□□□□□ -2.13
PHRF1Q9P1Y6 AC010301.1-201ENST00000473936 355 ntBASIC1.76□□□□□ -2.13
PHRF1Q9P1Y6 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.76□□□□□ -2.13
PHRF1Q9P1Y6 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.76□□□□□ -2.13
PHRF1Q9P1Y6 AC097504.2-201ENST00000608088 454 ntBASIC1.76□□□□□ -2.13
PHRF1Q9P1Y6 AC025016.1-201ENST00000616746 682 ntBASIC1.76□□□□□ -2.13
PHRF1Q9P1Y6 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC1.76□□□□□ -2.13
PHRF1Q9P1Y6 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
PHRF1Q9P1Y6 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
PHRF1Q9P1Y6 AL136520.1-201ENST00000600311 1322 ntBASIC1.75□□□□□ -2.13
PHRF1Q9P1Y6 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.75□□□□□ -2.13
PHRF1Q9P1Y6 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
PHRF1Q9P1Y6 Y_RNA.36-201ENST00000362602 112 ntBASIC1.75□□□□□ -2.13
PHRF1Q9P1Y6 RNU6-386P-201ENST00000362650 107 ntBASIC1.75□□□□□ -2.13
PHRF1Q9P1Y6 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
PHRF1Q9P1Y6 AL023807.1-201ENST00000407932 359 ntBASIC1.75□□□□□ -2.13
PHRF1Q9P1Y6 MIR1250-201ENST00000408098 113 ntBASIC1.75□□□□□ -2.13
PHRF1Q9P1Y6 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.75□□□□□ -2.13
PHRF1Q9P1Y6 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC1.75□□□□□ -2.13
PHRF1Q9P1Y6 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC1.75□□□□□ -2.13
PHRF1Q9P1Y6 AP002345.1-201ENST00000456493 928 ntBASIC1.75□□□□□ -2.13
PHRF1Q9P1Y6 RBM43P1-201ENST00000476891 1081 ntBASIC1.75□□□□□ -2.13
PHRF1Q9P1Y6 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC1.75□□□□□ -2.13
PHRF1Q9P1Y6 SUMO1P1-201ENST00000497904 306 ntBASIC1.75□□□□□ -2.13
PHRF1Q9P1Y6 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC1.75□□□□□ -2.13
PHRF1Q9P1Y6 MTND2P26-201ENST00000528255 1029 ntBASIC1.75□□□□□ -2.13
PHRF1Q9P1Y6 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC1.75□□□□□ -2.13
PHRF1Q9P1Y6 AP003717.3-201ENST00000544832 1180 ntBASIC1.75□□□□□ -2.13
PHRF1Q9P1Y6 AC109446.2-201ENST00000567872 497 ntBASIC1.75□□□□□ -2.13
PHRF1Q9P1Y6 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC1.75□□□□□ -2.13
PHRF1Q9P1Y6 AC090897.2-201ENST00000581715 130 ntBASIC1.75□□□□□ -2.13
PHRF1Q9P1Y6 MKKS-204ENST00000639674 192 ntBASIC1.75□□□□□ -2.13
PHRF1Q9P1Y6 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
PHRF1Q9P1Y6 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.75□□□□□ -2.13
PHRF1Q9P1Y6 AP000648.3-201ENST00000623539 4507 ntBASIC1.75□□□□□ -2.13
PHRF1Q9P1Y6 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
PHRF1Q9P1Y6 RNA5SP391-201ENST00000363456 119 ntBASIC1.74□□□□□ -2.13
PHRF1Q9P1Y6 RNU6-1032P-201ENST00000384100 107 ntBASIC1.74□□□□□ -2.13
PHRF1Q9P1Y6 AC007098.1-201ENST00000420122 367 ntBASIC1.74□□□□□ -2.13
PHRF1Q9P1Y6 RPL21P66-201ENST00000426566 466 ntBASIC1.74□□□□□ -2.13
PHRF1Q9P1Y6 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
PHRF1Q9P1Y6 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC1.74□□□□□ -2.13
PHRF1Q9P1Y6 UBBP3-201ENST00000445497 241 ntBASIC1.74□□□□□ -2.13
PHRF1Q9P1Y6 snoU13.7-201ENST00000459220 104 ntBASIC1.74□□□□□ -2.13
PHRF1Q9P1Y6 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.74□□□□□ -2.13
PHRF1Q9P1Y6 RPS3AP22-201ENST00000488297 769 ntBASIC1.74□□□□□ -2.13
PHRF1Q9P1Y6 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC1.74□□□□□ -2.13
PHRF1Q9P1Y6 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC1.74□□□□□ -2.13
PHRF1Q9P1Y6 RNA5SP61-201ENST00000516453 100 ntBASIC1.74□□□□□ -2.13
PHRF1Q9P1Y6 RNU6-711P-201ENST00000517255 106 ntBASIC1.74□□□□□ -2.13
PHRF1Q9P1Y6 AP003033.1-201ENST00000527244 415 ntBASIC1.74□□□□□ -2.13
PHRF1Q9P1Y6 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.74□□□□□ -2.13
PHRF1Q9P1Y6 AP000907.2-201ENST00000530827 353 ntBASIC1.74□□□□□ -2.13
PHRF1Q9P1Y6 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.74□□□□□ -2.13
PHRF1Q9P1Y6 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
PHRF1Q9P1Y6 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms