Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AL079342.2-201ENST00000403367 482 ntBASIC2.15□□□□□ -2.07
VAPAQ9P0L0 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.15□□□□□ -2.07
VAPAQ9P0L0 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.15□□□□□ -2.07
VAPAQ9P0L0 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.15□□□□□ -2.07
VAPAQ9P0L0 PGBD4P3-201ENST00000440731 581 ntBASIC2.15□□□□□ -2.07
VAPAQ9P0L0 OR10R1P-201ENST00000441524 1141 ntBASIC2.15□□□□□ -2.07
VAPAQ9P0L0 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.15□□□□□ -2.07
VAPAQ9P0L0 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.15□□□□□ -2.07
VAPAQ9P0L0 AL109933.2-201ENST00000452651 260 ntBASIC2.15□□□□□ -2.07
VAPAQ9P0L0 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.15□□□□□ -2.07
VAPAQ9P0L0 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.15□□□□□ -2.07
VAPAQ9P0L0 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
VAPAQ9P0L0 AC114981.1-201ENST00000503897 678 ntBASIC2.15□□□□□ -2.07
VAPAQ9P0L0 AC234781.5-201ENST00000508429 271 ntBASIC2.15□□□□□ -2.07
VAPAQ9P0L0 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.15□□□□□ -2.07
VAPAQ9P0L0 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC2.15□□□□□ -2.07
VAPAQ9P0L0 AP003049.1-201ENST00000529418 457 ntBASIC2.15□□□□□ -2.07
VAPAQ9P0L0 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.15□□□□□ -2.07
VAPAQ9P0L0 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.15□□□□□ -2.07
VAPAQ9P0L0 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.15□□□□□ -2.07
VAPAQ9P0L0 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.15□□□□□ -2.07
VAPAQ9P0L0 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.15□□□□□ -2.07
VAPAQ9P0L0 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.15□□□□□ -2.07
VAPAQ9P0L0 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.15□□□□□ -2.07
VAPAQ9P0L0 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.15□□□□□ -2.07
VAPAQ9P0L0 AC245884.12-201ENST00000615364 59 ntBASIC2.15□□□□□ -2.07
VAPAQ9P0L0 AC109454.4-201ENST00000623411 649 ntBASIC2.15□□□□□ -2.07
VAPAQ9P0L0 AP001002.2-201ENST00000625137 386 ntBASIC2.15□□□□□ -2.07
VAPAQ9P0L0 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
VAPAQ9P0L0 FTLP6-201ENST00000355274 422 ntBASIC2.14□□□□□ -2.07
VAPAQ9P0L0 RNU5B-4P-201ENST00000363508 111 ntBASIC2.14□□□□□ -2.07
VAPAQ9P0L0 RNU6-140P-201ENST00000384566 108 ntBASIC2.14□□□□□ -2.07
VAPAQ9P0L0 AL109755.1-201ENST00000401791 649 ntBASIC2.14□□□□□ -2.07
VAPAQ9P0L0 RNU2-49P-201ENST00000410666 184 ntBASIC2.14□□□□□ -2.07
VAPAQ9P0L0 RNA5SP184-201ENST00000411071 108 ntBASIC2.14□□□□□ -2.07
VAPAQ9P0L0 AL513331.1-201ENST00000411908 397 ntBASIC2.14□□□□□ -2.07
VAPAQ9P0L0 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.14□□□□□ -2.07
VAPAQ9P0L0 USP9YP27-201ENST00000418455 438 ntBASIC2.14□□□□□ -2.07
VAPAQ9P0L0 NANOGP5-201ENST00000424456 877 ntBASIC2.14□□□□□ -2.07
VAPAQ9P0L0 ZNF736P7Y-201ENST00000425158 820 ntBASIC2.14□□□□□ -2.07
VAPAQ9P0L0 ZNF863P-201ENST00000426746 417 ntBASIC2.14□□□□□ -2.07
VAPAQ9P0L0 RPS3AP12-201ENST00000443616 753 ntBASIC2.14□□□□□ -2.07
VAPAQ9P0L0 COX6CP12-201ENST00000446748 202 ntBASIC2.14□□□□□ -2.07
VAPAQ9P0L0 AC002381.1-201ENST00000447049 280 ntBASIC2.14□□□□□ -2.07
VAPAQ9P0L0 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.14□□□□□ -2.07
VAPAQ9P0L0 snoU13.8-201ENST00000458890 104 ntBASIC2.14□□□□□ -2.07
VAPAQ9P0L0 RPS20P20-201ENST00000460498 340 ntBASIC2.14□□□□□ -2.07
VAPAQ9P0L0 AC004263.1-201ENST00000479327 332 ntBASIC2.14□□□□□ -2.07
VAPAQ9P0L0 RPS29P20-201ENST00000489592 171 ntBASIC2.14□□□□□ -2.07
VAPAQ9P0L0 AC008837.1-201ENST00000511513 412 ntBASIC2.14□□□□□ -2.07
VAPAQ9P0L0 RNA5SP356-201ENST00000515972 94 ntBASIC2.14□□□□□ -2.07
VAPAQ9P0L0 RNA5SP291-201ENST00000517222 105 ntBASIC2.14□□□□□ -2.07
VAPAQ9P0L0 RPL7P20-201ENST00000520308 745 ntBASIC2.14□□□□□ -2.07
VAPAQ9P0L0 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.14□□□□□ -2.07
VAPAQ9P0L0 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.14□□□□□ -2.07
VAPAQ9P0L0 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.14□□□□□ -2.07
VAPAQ9P0L0 AC027176.1-201ENST00000560204 514 ntBASIC2.14□□□□□ -2.07
VAPAQ9P0L0 AC023824.2-201ENST00000566185 400 ntBASIC2.14□□□□□ -2.07
VAPAQ9P0L0 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.14□□□□□ -2.07
VAPAQ9P0L0 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.14□□□□□ -2.07
VAPAQ9P0L0 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.14□□□□□ -2.07
VAPAQ9P0L0 RPS15AP11-201ENST00000594193 385 ntBASIC2.14□□□□□ -2.07
VAPAQ9P0L0 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC2.14□□□□□ -2.07
VAPAQ9P0L0 AC006023.1-201ENST00000603944 259 ntBASIC2.14□□□□□ -2.07
VAPAQ9P0L0 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.14□□□□□ -2.07
VAPAQ9P0L0 AC013562.2-201ENST00000611632 603 ntBASIC2.14□□□□□ -2.07
VAPAQ9P0L0 AC006386.2-201ENST00000624491 75 ntBASIC2.14□□□□□ -2.07
VAPAQ9P0L0 AC012005.1-201ENST00000624575 75 ntBASIC2.14□□□□□ -2.07
VAPAQ9P0L0 CU459211.1-201ENST00000635667 749 ntBASIC2.14□□□□□ -2.07
VAPAQ9P0L0 AC006927.2-201ENST00000639256 389 ntBASIC2.14□□□□□ -2.07
VAPAQ9P0L0 AC009902.3-201ENST00000606235 2172 ntBASIC2.14□□□□□ -2.07
VAPAQ9P0L0 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.14□□□□□ -2.07
VAPAQ9P0L0 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.14□□□□□ -2.07
VAPAQ9P0L0 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
VAPAQ9P0L0 CDR1-202ENST00000625883 1485 ntBASIC2.14□□□□□ -2.07
VAPAQ9P0L0 CKAP2P1-201ENST00000555477 2049 ntBASIC2.13□□□□□ -2.07
VAPAQ9P0L0 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
VAPAQ9P0L0 AL137003.2-201ENST00000606924 2538 ntBASIC2.13□□□□□ -2.07
VAPAQ9P0L0 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
VAPAQ9P0L0 AL596028.1-201ENST00000326971 197 ntBASIC2.13□□□□□ -2.07
VAPAQ9P0L0 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
VAPAQ9P0L0 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
VAPAQ9P0L0 SNORA80A-201ENST00000363922 136 ntBASIC2.13□□□□□ -2.07
VAPAQ9P0L0 Y_RNA.234-201ENST00000364409 97 ntBASIC2.13□□□□□ -2.07
VAPAQ9P0L0 SNORA6-201ENST00000384033 151 ntBASIC2.13□□□□□ -2.07
VAPAQ9P0L0 MIR491-201ENST00000384877 84 ntBASIC2.13□□□□□ -2.07
VAPAQ9P0L0 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
VAPAQ9P0L0 HMGB1P11-201ENST00000413899 637 ntBASIC2.13□□□□□ -2.07
VAPAQ9P0L0 AC009963.1-201ENST00000417265 157 ntBASIC2.13□□□□□ -2.07
VAPAQ9P0L0 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.13□□□□□ -2.07
VAPAQ9P0L0 COTL1P1-201ENST00000422309 375 ntBASIC2.13□□□□□ -2.07
VAPAQ9P0L0 C1DP1-201ENST00000426049 402 ntBASIC2.13□□□□□ -2.07
VAPAQ9P0L0 RPS15AP5-201ENST00000436276 388 ntBASIC2.13□□□□□ -2.07
VAPAQ9P0L0 IPO7P1-201ENST00000442031 636 ntBASIC2.13□□□□□ -2.07
VAPAQ9P0L0 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
VAPAQ9P0L0 TRGVB-201ENST00000453257 471 ntBASIC2.13□□□□□ -2.07
VAPAQ9P0L0 RPL12P25-201ENST00000455592 494 ntBASIC2.13□□□□□ -2.07
VAPAQ9P0L0 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.13□□□□□ -2.07
VAPAQ9P0L0 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC2.13□□□□□ -2.07
VAPAQ9P0L0 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms