Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 KLF3P2-201ENST00000465138 268 ntBASIC2.99□□□□□ -1.93
NDE1Q9NXR1 RN7SL542P-201ENST00000467147 294 ntBASIC2.99□□□□□ -1.93
NDE1Q9NXR1 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.99□□□□□ -1.93
NDE1Q9NXR1 AC025518.1-201ENST00000479856 347 ntBASIC2.99□□□□□ -1.93
NDE1Q9NXR1 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.99□□□□□ -1.93
NDE1Q9NXR1 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
NDE1Q9NXR1 GMPSP1-201ENST00000514075 579 ntBASIC2.99□□□□□ -1.93
NDE1Q9NXR1 SNORA67.7-201ENST00000516664 135 ntBASIC2.99□□□□□ -1.93
NDE1Q9NXR1 RNU6-56P-201ENST00000516986 93 ntBASIC2.99□□□□□ -1.93
NDE1Q9NXR1 RNU6-711P-201ENST00000517255 106 ntBASIC2.99□□□□□ -1.93
NDE1Q9NXR1 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.99□□□□□ -1.93
NDE1Q9NXR1 AC022616.6-201ENST00000520479 119 ntBASIC2.99□□□□□ -1.93
NDE1Q9NXR1 AP000907.2-201ENST00000530827 353 ntBASIC2.99□□□□□ -1.93
NDE1Q9NXR1 AL133271.1-201ENST00000538229 291 ntBASIC2.99□□□□□ -1.93
NDE1Q9NXR1 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.99□□□□□ -1.93
NDE1Q9NXR1 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC2.99□□□□□ -1.93
NDE1Q9NXR1 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.99□□□□□ -1.93
NDE1Q9NXR1 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.99□□□□□ -1.93
NDE1Q9NXR1 RPL21P5-201ENST00000554662 472 ntBASIC2.99□□□□□ -1.93
NDE1Q9NXR1 AC087481.2-201ENST00000565492 330 ntBASIC2.99□□□□□ -1.93
NDE1Q9NXR1 MIR4528-201ENST00000577763 90 ntBASIC2.99□□□□□ -1.93
NDE1Q9NXR1 AC006504.3-201ENST00000586818 523 ntBASIC2.99□□□□□ -1.93
NDE1Q9NXR1 AL627309.6-201ENST00000606857 840 ntBASIC2.99□□□□□ -1.93
NDE1Q9NXR1 AC104073.3-201ENST00000610942 955 ntBASIC2.99□□□□□ -1.93
NDE1Q9NXR1 AC002550.2-201ENST00000621246 394 ntBASIC2.99□□□□□ -1.93
NDE1Q9NXR1 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.99□□□□□ -1.93
NDE1Q9NXR1 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.99□□□□□ -1.93
NDE1Q9NXR1 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
NDE1Q9NXR1 AC116096.1-201ENST00000566804 2314 ntBASIC2.98□□□□□ -1.93
NDE1Q9NXR1 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
NDE1Q9NXR1 MAPK10-322ENST00000641485 4530 ntBASIC2.98□□□□□ -1.93
NDE1Q9NXR1 Z83843.1-201ENST00000604070 3685 ntBASIC2.98□□□□□ -1.93
NDE1Q9NXR1 RNY4P34-201ENST00000364779 95 ntBASIC2.98□□□□□ -1.93
NDE1Q9NXR1 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC2.98□□□□□ -1.93
NDE1Q9NXR1 MIR135A2-201ENST00000384854 100 ntBASIC2.98□□□□□ -1.93
NDE1Q9NXR1 MIR200C-201ENST00000384980 68 ntBASIC2.98□□□□□ -1.93
NDE1Q9NXR1 RPL21P17-201ENST00000397467 475 ntBASIC2.98□□□□□ -1.93
NDE1Q9NXR1 AC110754.1-201ENST00000399740 601 ntBASIC2.98□□□□□ -1.93
NDE1Q9NXR1 FCF1P10-201ENST00000407590 479 ntBASIC2.98□□□□□ -1.93
NDE1Q9NXR1 RNU6-248P-201ENST00000410720 107 ntBASIC2.98□□□□□ -1.93
NDE1Q9NXR1 RPS3AP3-201ENST00000411933 242 ntBASIC2.98□□□□□ -1.93
NDE1Q9NXR1 SPA17P1-201ENST00000416656 452 ntBASIC2.98□□□□□ -1.93
NDE1Q9NXR1 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.98□□□□□ -1.93
NDE1Q9NXR1 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.98□□□□□ -1.93
NDE1Q9NXR1 AL033528.1-201ENST00000453780 140 ntBASIC2.98□□□□□ -1.93
NDE1Q9NXR1 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.98□□□□□ -1.93
NDE1Q9NXR1 AP1S2P1-201ENST00000457344 379 ntBASIC2.98□□□□□ -1.93
NDE1Q9NXR1 SNORD121B-201ENST00000458838 81 ntBASIC2.98□□□□□ -1.93
NDE1Q9NXR1 RPS27AP9-201ENST00000477681 438 ntBASIC2.98□□□□□ -1.93
NDE1Q9NXR1 MTND1P3-201ENST00000484956 952 ntBASIC2.98□□□□□ -1.93
NDE1Q9NXR1 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.98□□□□□ -1.93
NDE1Q9NXR1 MTCO2P32-201ENST00000514865 403 ntBASIC2.98□□□□□ -1.93
NDE1Q9NXR1 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.98□□□□□ -1.93
NDE1Q9NXR1 RN7SKP13-201ENST00000515933 244 ntBASIC2.98□□□□□ -1.93
NDE1Q9NXR1 RNU6-1095P-201ENST00000516148 108 ntBASIC2.98□□□□□ -1.93
NDE1Q9NXR1 RNU6-798P-201ENST00000516912 103 ntBASIC2.98□□□□□ -1.93
NDE1Q9NXR1 RNU6-1073P-201ENST00000517182 106 ntBASIC2.98□□□□□ -1.93
NDE1Q9NXR1 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.98□□□□□ -1.93
NDE1Q9NXR1 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
NDE1Q9NXR1 AP004371.1-201ENST00000525240 214 ntBASIC2.98□□□□□ -1.93
NDE1Q9NXR1 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.98□□□□□ -1.93
NDE1Q9NXR1 AC137800.2-201ENST00000574375 120 ntBASIC2.98□□□□□ -1.93
NDE1Q9NXR1 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.98□□□□□ -1.93
NDE1Q9NXR1 MIR3944-201ENST00000581277 108 ntBASIC2.98□□□□□ -1.93
NDE1Q9NXR1 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.98□□□□□ -1.93
NDE1Q9NXR1 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.98□□□□□ -1.93
NDE1Q9NXR1 AC024220.1-201ENST00000603675 484 ntBASIC2.98□□□□□ -1.93
NDE1Q9NXR1 AC005332.10-201ENST00000612725 619 ntBASIC2.98□□□□□ -1.93
NDE1Q9NXR1 AC009159.1-201ENST00000618386 642 ntBASIC2.98□□□□□ -1.93
NDE1Q9NXR1 AC090617.7-201ENST00000623952 126 ntBASIC2.98□□□□□ -1.93
NDE1Q9NXR1 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC2.98□□□□□ -1.93
NDE1Q9NXR1 AC110994.2-201ENST00000635481 492 ntBASIC2.98□□□□□ -1.93
NDE1Q9NXR1 AC010149.2-201ENST00000637608 315 ntBASIC2.98□□□□□ -1.93
NDE1Q9NXR1 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
NDE1Q9NXR1 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.98□□□□□ -1.93
NDE1Q9NXR1 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
NDE1Q9NXR1 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
NDE1Q9NXR1 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.97□□□□□ -1.93
NDE1Q9NXR1 Y_RNA.517-201ENST00000384551 106 ntBASIC2.97□□□□□ -1.93
NDE1Q9NXR1 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
NDE1Q9NXR1 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.97□□□□□ -1.93
NDE1Q9NXR1 RNU2-16P-201ENST00000410712 136 ntBASIC2.97□□□□□ -1.93
NDE1Q9NXR1 AL451074.5-201ENST00000415894 435 ntBASIC2.97□□□□□ -1.93
NDE1Q9NXR1 MTCO1P21-201ENST00000416634 589 ntBASIC2.97□□□□□ -1.93
NDE1Q9NXR1 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.97□□□□□ -1.93
NDE1Q9NXR1 AC104651.1-201ENST00000427559 735 ntBASIC2.97□□□□□ -1.93
NDE1Q9NXR1 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.97□□□□□ -1.93
NDE1Q9NXR1 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.97□□□□□ -1.93
NDE1Q9NXR1 MTCO3P5-201ENST00000433620 714 ntBASIC2.97□□□□□ -1.93
NDE1Q9NXR1 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.97□□□□□ -1.93
NDE1Q9NXR1 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.97□□□□□ -1.93
NDE1Q9NXR1 RPS29P7-201ENST00000439662 171 ntBASIC2.97□□□□□ -1.93
NDE1Q9NXR1 PGBD4P3-201ENST00000440731 581 ntBASIC2.97□□□□□ -1.93
NDE1Q9NXR1 AL049734.2-201ENST00000441066 616 ntBASIC2.97□□□□□ -1.93
NDE1Q9NXR1 MTND6P13-201ENST00000443510 523 ntBASIC2.97□□□□□ -1.93
NDE1Q9NXR1 RAC1P7-201ENST00000445367 377 ntBASIC2.97□□□□□ -1.93
NDE1Q9NXR1 TPT1P14-201ENST00000448018 505 ntBASIC2.97□□□□□ -1.93
NDE1Q9NXR1 AL358232.1-201ENST00000448030 501 ntBASIC2.97□□□□□ -1.93
NDE1Q9NXR1 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.97□□□□□ -1.93
NDE1Q9NXR1 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms