Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 AC109583.1-201ENST00000432156 268 ntBASIC3.39□□□□□ -1.87
ECHDC1Q9NTX5 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.39□□□□□ -1.87
ECHDC1Q9NTX5 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.39□□□□□ -1.87
ECHDC1Q9NTX5 FAM103A2P-201ENST00000444122 354 ntBASIC3.39□□□□□ -1.87
ECHDC1Q9NTX5 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.39□□□□□ -1.87
ECHDC1Q9NTX5 RPL7P52-201ENST00000449200 742 ntBASIC3.39□□□□□ -1.87
ECHDC1Q9NTX5 PAXBP1P1-201ENST00000449315 447 ntBASIC3.39□□□□□ -1.87
ECHDC1Q9NTX5 HMGN2P7-201ENST00000456186 273 ntBASIC3.39□□□□□ -1.87
ECHDC1Q9NTX5 AP001486.1-201ENST00000463339 476 ntBASIC3.39□□□□□ -1.87
ECHDC1Q9NTX5 AL049873.1-201ENST00000480540 376 ntBASIC3.39□□□□□ -1.87
ECHDC1Q9NTX5 FAM172BP-201ENST00000487497 1089 ntBASIC3.39□□□□□ -1.87
ECHDC1Q9NTX5 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.39□□□□□ -1.87
ECHDC1Q9NTX5 HMGB3P15-201ENST00000507326 574 ntBASIC3.39□□□□□ -1.87
ECHDC1Q9NTX5 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.39□□□□□ -1.87
ECHDC1Q9NTX5 NDUFB4P9-201ENST00000511646 388 ntBASIC3.39□□□□□ -1.87
ECHDC1Q9NTX5 MTND3P5-201ENST00000512798 333 ntBASIC3.39□□□□□ -1.87
ECHDC1Q9NTX5 FABP5P5-201ENST00000515537 406 ntBASIC3.39□□□□□ -1.87
ECHDC1Q9NTX5 RNA5SP367-201ENST00000516557 118 ntBASIC3.39□□□□□ -1.87
ECHDC1Q9NTX5 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.39□□□□□ -1.87
ECHDC1Q9NTX5 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.39□□□□□ -1.87
ECHDC1Q9NTX5 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
ECHDC1Q9NTX5 AP003497.1-201ENST00000528472 562 ntBASIC3.39□□□□□ -1.87
ECHDC1Q9NTX5 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.39□□□□□ -1.87
ECHDC1Q9NTX5 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.39□□□□□ -1.87
ECHDC1Q9NTX5 MTND1P15-201ENST00000579262 949 ntBASIC3.39□□□□□ -1.87
ECHDC1Q9NTX5 MIR3605-201ENST00000583214 100 ntBASIC3.39□□□□□ -1.87
ECHDC1Q9NTX5 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.39□□□□□ -1.87
ECHDC1Q9NTX5 AC012119.1-201ENST00000603184 222 ntBASIC3.39□□□□□ -1.87
ECHDC1Q9NTX5 AC004853.1-201ENST00000604902 698 ntBASIC3.39□□□□□ -1.87
ECHDC1Q9NTX5 AL033523.1-201ENST00000605153 153 ntBASIC3.39□□□□□ -1.87
ECHDC1Q9NTX5 AC087752.4-201ENST00000605911 462 ntBASIC3.39□□□□□ -1.87
ECHDC1Q9NTX5 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.39□□□□□ -1.87
ECHDC1Q9NTX5 AL596245.1-201ENST00000618994 362 ntBASIC3.39□□□□□ -1.87
ECHDC1Q9NTX5 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
ECHDC1Q9NTX5 CRYM-AS1-204ENST00000637983 556 ntBASIC3.39□□□□□ -1.87
ECHDC1Q9NTX5 AC066616.2-201ENST00000559334 1481 ntBASIC3.39□□□□□ -1.87
ECHDC1Q9NTX5 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
ECHDC1Q9NTX5 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
ECHDC1Q9NTX5 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
ECHDC1Q9NTX5 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
ECHDC1Q9NTX5 RNU6-853P-201ENST00000364306 107 ntBASIC3.38□□□□□ -1.87
ECHDC1Q9NTX5 RNU6-1207P-201ENST00000384343 107 ntBASIC3.38□□□□□ -1.87
ECHDC1Q9NTX5 RPS20P2-201ENST00000402520 389 ntBASIC3.38□□□□□ -1.87
ECHDC1Q9NTX5 CCNG1P1-201ENST00000406783 885 ntBASIC3.38□□□□□ -1.87
ECHDC1Q9NTX5 MIR1250-201ENST00000408098 113 ntBASIC3.38□□□□□ -1.87
ECHDC1Q9NTX5 CDK8P2-201ENST00000415020 547 ntBASIC3.38□□□□□ -1.87
ECHDC1Q9NTX5 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.38□□□□□ -1.87
ECHDC1Q9NTX5 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.38□□□□□ -1.87
ECHDC1Q9NTX5 AC006548.1-201ENST00000427470 102 ntBASIC3.38□□□□□ -1.87
ECHDC1Q9NTX5 AC009969.1-201ENST00000438726 172 ntBASIC3.38□□□□□ -1.87
ECHDC1Q9NTX5 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
ECHDC1Q9NTX5 AL592447.1-201ENST00000447592 540 ntBASIC3.38□□□□□ -1.87
ECHDC1Q9NTX5 HMGB1P15-201ENST00000453854 435 ntBASIC3.38□□□□□ -1.87
ECHDC1Q9NTX5 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.38□□□□□ -1.87
ECHDC1Q9NTX5 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.38□□□□□ -1.87
ECHDC1Q9NTX5 RNA5SP269-201ENST00000459032 137 ntBASIC3.38□□□□□ -1.87
ECHDC1Q9NTX5 SNRPGP3-201ENST00000469405 227 ntBASIC3.38□□□□□ -1.87
ECHDC1Q9NTX5 AC097462.2-201ENST00000504623 481 ntBASIC3.38□□□□□ -1.87
ECHDC1Q9NTX5 COX7A2P2-201ENST00000505291 250 ntBASIC3.38□□□□□ -1.87
ECHDC1Q9NTX5 HMGB1P22-201ENST00000505315 124 ntBASIC3.38□□□□□ -1.87
ECHDC1Q9NTX5 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
ECHDC1Q9NTX5 MTCO2P32-201ENST00000514865 403 ntBASIC3.38□□□□□ -1.87
ECHDC1Q9NTX5 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
ECHDC1Q9NTX5 AP003122.4-201ENST00000530980 758 ntBASIC3.38□□□□□ -1.87
ECHDC1Q9NTX5 AP000857.1-201ENST00000532151 543 ntBASIC3.38□□□□□ -1.87
ECHDC1Q9NTX5 AC068587.4-201ENST00000533893 186 ntBASIC3.38□□□□□ -1.87
ECHDC1Q9NTX5 AP000873.5-201ENST00000533906 236 ntBASIC3.38□□□□□ -1.87
ECHDC1Q9NTX5 ZNF519P3-201ENST00000557158 1032 ntBASIC3.38□□□□□ -1.87
ECHDC1Q9NTX5 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.38□□□□□ -1.87
ECHDC1Q9NTX5 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.38□□□□□ -1.87
ECHDC1Q9NTX5 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.38□□□□□ -1.87
ECHDC1Q9NTX5 AC091965.4-201ENST00000607691 587 ntBASIC3.38□□□□□ -1.87
ECHDC1Q9NTX5 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.38□□□□□ -1.87
ECHDC1Q9NTX5 AC005046.1-201ENST00000608515 625 ntBASIC3.38□□□□□ -1.87
ECHDC1Q9NTX5 U73479.1-201ENST00000618062 168 ntBASIC3.38□□□□□ -1.87
ECHDC1Q9NTX5 AC012150.2-201ENST00000621300 544 ntBASIC3.38□□□□□ -1.87
ECHDC1Q9NTX5 CR381572.1-201ENST00000625098 102 ntBASIC3.38□□□□□ -1.87
ECHDC1Q9NTX5 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.38□□□□□ -1.87
ECHDC1Q9NTX5 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
ECHDC1Q9NTX5 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
ECHDC1Q9NTX5 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
ECHDC1Q9NTX5 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ECHDC1Q9NTX5 AC009487.2-201ENST00000420969 6821 ntBASIC3.37□□□□□ -1.87
ECHDC1Q9NTX5 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.37□□□□□ -1.87
ECHDC1Q9NTX5 TEX21P-201ENST00000447107 1476 ntBASIC3.37□□□□□ -1.87
ECHDC1Q9NTX5 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ECHDC1Q9NTX5 FGF7P2-201ENST00000332473 296 ntBASIC3.37□□□□□ -1.87
ECHDC1Q9NTX5 RNU6-600P-201ENST00000362524 99 ntBASIC3.37□□□□□ -1.87
ECHDC1Q9NTX5 SNORD51-201ENST00000384320 80 ntBASIC3.37□□□□□ -1.87
ECHDC1Q9NTX5 Y_RNA.559-201ENST00000384686 107 ntBASIC3.37□□□□□ -1.87
ECHDC1Q9NTX5 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
ECHDC1Q9NTX5 AL138827.1-201ENST00000402666 306 ntBASIC3.37□□□□□ -1.87
ECHDC1Q9NTX5 AL356421.1-201ENST00000403255 413 ntBASIC3.37□□□□□ -1.87
ECHDC1Q9NTX5 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.37□□□□□ -1.87
ECHDC1Q9NTX5 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.37□□□□□ -1.87
ECHDC1Q9NTX5 USP9YP13-201ENST00000417797 480 ntBASIC3.37□□□□□ -1.87
ECHDC1Q9NTX5 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.37□□□□□ -1.87
ECHDC1Q9NTX5 AC087499.2-201ENST00000432861 149 ntBASIC3.37□□□□□ -1.87
ECHDC1Q9NTX5 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
ECHDC1Q9NTX5 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms