Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC007375.1-201ENST00000554513 578 ntBASIC1.91□□□□□ -2.1
CISHQ9NSE2 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.91□□□□□ -2.1
CISHQ9NSE2 AC023824.3-201ENST00000569003 562 ntBASIC1.91□□□□□ -2.1
CISHQ9NSE2 MIR4419B-201ENST00000577260 68 ntBASIC1.91□□□□□ -2.1
CISHQ9NSE2 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.91□□□□□ -2.1
CISHQ9NSE2 AC013444.2-201ENST00000603317 787 ntBASIC1.91□□□□□ -2.1
CISHQ9NSE2 SNORD14A-201ENST00000606526 91 ntBASIC1.91□□□□□ -2.1
CISHQ9NSE2 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CISHQ9NSE2 AC009090.3-201ENST00000616553 565 ntBASIC1.91□□□□□ -2.1
CISHQ9NSE2 AC006213.5-201ENST00000619673 288 ntBASIC1.91□□□□□ -2.1
CISHQ9NSE2 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CISHQ9NSE2 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
CISHQ9NSE2 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
CISHQ9NSE2 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.9□□□□□ -2.11
CISHQ9NSE2 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CISHQ9NSE2 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CISHQ9NSE2 RNU6-796P-201ENST00000391086 107 ntBASIC1.9□□□□□ -2.11
CISHQ9NSE2 TMSB4XP8-201ENST00000402089 135 ntBASIC1.9□□□□□ -2.11
CISHQ9NSE2 AL355615.1-201ENST00000406187 641 ntBASIC1.9□□□□□ -2.11
CISHQ9NSE2 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.9□□□□□ -2.11
CISHQ9NSE2 TMSB4XP6-201ENST00000415187 135 ntBASIC1.9□□□□□ -2.11
CISHQ9NSE2 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.9□□□□□ -2.11
CISHQ9NSE2 TMSB4XP1-201ENST00000424567 135 ntBASIC1.9□□□□□ -2.11
CISHQ9NSE2 HMGN2P19-201ENST00000425149 265 ntBASIC1.9□□□□□ -2.11
CISHQ9NSE2 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.9□□□□□ -2.11
CISHQ9NSE2 GTF2IP20-201ENST00000431663 360 ntBASIC1.9□□□□□ -2.11
CISHQ9NSE2 AC002542.1-201ENST00000440683 193 ntBASIC1.9□□□□□ -2.11
CISHQ9NSE2 AL049714.1-201ENST00000466686 347 ntBASIC1.9□□□□□ -2.11
CISHQ9NSE2 MTND4LP3-201ENST00000468320 276 ntBASIC1.9□□□□□ -2.11
CISHQ9NSE2 RN7SL274P-201ENST00000492268 272 ntBASIC1.9□□□□□ -2.11
CISHQ9NSE2 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.9□□□□□ -2.11
CISHQ9NSE2 RPL23AP63-201ENST00000498752 471 ntBASIC1.9□□□□□ -2.11
CISHQ9NSE2 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.9□□□□□ -2.11
CISHQ9NSE2 RNU5A-7P-201ENST00000515979 116 ntBASIC1.9□□□□□ -2.11
CISHQ9NSE2 RNU6-295P-201ENST00000516901 104 ntBASIC1.9□□□□□ -2.11
CISHQ9NSE2 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC1.9□□□□□ -2.11
CISHQ9NSE2 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.9□□□□□ -2.11
CISHQ9NSE2 HMGB1P1-201ENST00000522557 636 ntBASIC1.9□□□□□ -2.11
CISHQ9NSE2 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CISHQ9NSE2 AL158827.2-201ENST00000602494 330 ntBASIC1.9□□□□□ -2.11
CISHQ9NSE2 GAS5-AS1-201ENST00000602767 694 ntBASIC1.9□□□□□ -2.11
CISHQ9NSE2 KATNBL1P1-201ENST00000605192 748 ntBASIC1.9□□□□□ -2.11
CISHQ9NSE2 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.9□□□□□ -2.11
CISHQ9NSE2 MIR6840-201ENST00000611937 71 ntBASIC1.9□□□□□ -2.11
CISHQ9NSE2 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.9□□□□□ -2.11
CISHQ9NSE2 AL691447.3-201ENST00000635020 330 ntBASIC1.9□□□□□ -2.11
CISHQ9NSE2 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.9□□□□□ -2.11
CISHQ9NSE2 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CISHQ9NSE2 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CISHQ9NSE2 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
CISHQ9NSE2 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.89□□□□□ -2.11
CISHQ9NSE2 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
CISHQ9NSE2 SNORA51.6-201ENST00000384151 125 ntBASIC1.89□□□□□ -2.11
CISHQ9NSE2 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.89□□□□□ -2.11
CISHQ9NSE2 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.89□□□□□ -2.11
CISHQ9NSE2 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.89□□□□□ -2.11
CISHQ9NSE2 RPL31P54-201ENST00000429803 370 ntBASIC1.89□□□□□ -2.11
CISHQ9NSE2 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.89□□□□□ -2.11
CISHQ9NSE2 AC092155.2-201ENST00000454675 477 ntBASIC1.89□□□□□ -2.11
CISHQ9NSE2 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC1.89□□□□□ -2.11
CISHQ9NSE2 AC147055.4-201ENST00000504399 745 ntBASIC1.89□□□□□ -2.11
CISHQ9NSE2 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.89□□□□□ -2.11
CISHQ9NSE2 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CISHQ9NSE2 OR5AK1P-201ENST00000524837 922 ntBASIC1.89□□□□□ -2.11
CISHQ9NSE2 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.89□□□□□ -2.11
CISHQ9NSE2 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.89□□□□□ -2.11
CISHQ9NSE2 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.89□□□□□ -2.11
CISHQ9NSE2 AC067805.1-201ENST00000559344 470 ntBASIC1.89□□□□□ -2.11
CISHQ9NSE2 SULT1C2P1-202ENST00000562418 459 ntBASIC1.89□□□□□ -2.11
CISHQ9NSE2 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CISHQ9NSE2 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.89□□□□□ -2.11
CISHQ9NSE2 AC005498.1-201ENST00000592125 465 ntBASIC1.89□□□□□ -2.11
CISHQ9NSE2 OR10AB1P-201ENST00000609613 938 ntBASIC1.89□□□□□ -2.11
CISHQ9NSE2 AC005332.10-201ENST00000612725 619 ntBASIC1.89□□□□□ -2.11
CISHQ9NSE2 AC084768.2-201ENST00000622736 221 ntBASIC1.89□□□□□ -2.11
CISHQ9NSE2 AC073308.1-201ENST00000623696 305 ntBASIC1.89□□□□□ -2.11
CISHQ9NSE2 PISRT1-201ENST00000626175 531 ntBASIC1.89□□□□□ -2.11
CISHQ9NSE2 AP003399.1-201ENST00000637534 361 ntBASIC1.89□□□□□ -2.11
CISHQ9NSE2 MIR7515-201ENST00000637837 67 ntBASIC1.89□□□□□ -2.11
CISHQ9NSE2 MFSD8-213ENST00000641134 1327 ntBASIC1.89□□□□□ -2.11
CISHQ9NSE2 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CISHQ9NSE2 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.88□□□□□ -2.11
CISHQ9NSE2 AP006437.1-201ENST00000641440 3685 ntBASIC1.88□□□□□ -2.11
CISHQ9NSE2 SNORD56.4-201ENST00000363883 71 ntBASIC1.88□□□□□ -2.11
CISHQ9NSE2 SNORA38-201ENST00000363946 132 ntBASIC1.88□□□□□ -2.11
CISHQ9NSE2 AC083799.1-201ENST00000366451 910 ntBASIC1.88□□□□□ -2.11
CISHQ9NSE2 RNU4-52P-201ENST00000384209 138 ntBASIC1.88□□□□□ -2.11
CISHQ9NSE2 RNU6-1035P-201ENST00000384477 107 ntBASIC1.88□□□□□ -2.11
CISHQ9NSE2 AL355497.1-201ENST00000406262 551 ntBASIC1.88□□□□□ -2.11
CISHQ9NSE2 RPS3AP24-201ENST00000407896 734 ntBASIC1.88□□□□□ -2.11
CISHQ9NSE2 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.88□□□□□ -2.11
CISHQ9NSE2 RPL23AP39-201ENST00000415533 405 ntBASIC1.88□□□□□ -2.11
CISHQ9NSE2 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.88□□□□□ -2.11
CISHQ9NSE2 AL355994.1-201ENST00000424379 260 ntBASIC1.88□□□□□ -2.11
CISHQ9NSE2 SRIP2-201ENST00000428470 166 ntBASIC1.88□□□□□ -2.11
CISHQ9NSE2 AL645568.3-201ENST00000433683 316 ntBASIC1.88□□□□□ -2.11
CISHQ9NSE2 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.88□□□□□ -2.11
CISHQ9NSE2 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC1.88□□□□□ -2.11
CISHQ9NSE2 IPO7P1-201ENST00000442031 636 ntBASIC1.88□□□□□ -2.11
CISHQ9NSE2 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms