Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 MIR3690-201ENST00000580266 75 ntBASIC3.5□□□□□ -1.85
UPF2Q9HAU5 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.5□□□□□ -1.85
UPF2Q9HAU5 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.5□□□□□ -1.85
UPF2Q9HAU5 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.5□□□□□ -1.85
UPF2Q9HAU5 DEFB131E-202ENST00000602581 683 ntBASIC3.5□□□□□ -1.85
UPF2Q9HAU5 AC098614.4-201ENST00000607601 462 ntBASIC3.5□□□□□ -1.85
UPF2Q9HAU5 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.5□□□□□ -1.85
UPF2Q9HAU5 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.5□□□□□ -1.85
UPF2Q9HAU5 AC099654.13-201ENST00000639774 207 ntBASIC3.5□□□□□ -1.85
UPF2Q9HAU5 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.5□□□□□ -1.85
UPF2Q9HAU5 GABRG2-229ENST00000641017 3628 ntBASIC3.5□□□□□ -1.85
UPF2Q9HAU5 MTCO1P12-201ENST00000414273 1543 ntBASIC3.49□□□□□ -1.85
UPF2Q9HAU5 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
UPF2Q9HAU5 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.49□□□□□ -1.85
UPF2Q9HAU5 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.49□□□□□ -1.85
UPF2Q9HAU5 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
UPF2Q9HAU5 Y_RNA.3-201ENST00000362331 103 ntBASIC3.49□□□□□ -1.85
UPF2Q9HAU5 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
UPF2Q9HAU5 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.49□□□□□ -1.85
UPF2Q9HAU5 RPL17P12-201ENST00000413391 526 ntBASIC3.49□□□□□ -1.85
UPF2Q9HAU5 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.49□□□□□ -1.85
UPF2Q9HAU5 SNRPEP7-201ENST00000438350 220 ntBASIC3.49□□□□□ -1.85
UPF2Q9HAU5 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.49□□□□□ -1.85
UPF2Q9HAU5 AC008571.1-201ENST00000467232 300 ntBASIC3.49□□□□□ -1.85
UPF2Q9HAU5 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.49□□□□□ -1.85
UPF2Q9HAU5 RPL37P25-201ENST00000507308 276 ntBASIC3.49□□□□□ -1.85
UPF2Q9HAU5 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.49□□□□□ -1.85
UPF2Q9HAU5 MTND5P4-201ENST00000514978 288 ntBASIC3.49□□□□□ -1.85
UPF2Q9HAU5 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.49□□□□□ -1.85
UPF2Q9HAU5 RNU6-720P-201ENST00000516363 108 ntBASIC3.49□□□□□ -1.85
UPF2Q9HAU5 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.49□□□□□ -1.85
UPF2Q9HAU5 DUXAP2-201ENST00000519198 589 ntBASIC3.49□□□□□ -1.85
UPF2Q9HAU5 AC022861.1-201ENST00000522981 663 ntBASIC3.49□□□□□ -1.85
UPF2Q9HAU5 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.49□□□□□ -1.85
UPF2Q9HAU5 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.49□□□□□ -1.85
UPF2Q9HAU5 AC068587.4-201ENST00000533893 186 ntBASIC3.49□□□□□ -1.85
UPF2Q9HAU5 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.49□□□□□ -1.85
UPF2Q9HAU5 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.49□□□□□ -1.85
UPF2Q9HAU5 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.49□□□□□ -1.85
UPF2Q9HAU5 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.49□□□□□ -1.85
UPF2Q9HAU5 AC010653.1-201ENST00000571108 881 ntBASIC3.49□□□□□ -1.85
UPF2Q9HAU5 MIR5680-201ENST00000577577 84 ntBASIC3.49□□□□□ -1.85
UPF2Q9HAU5 MIR4528-201ENST00000577763 90 ntBASIC3.49□□□□□ -1.85
UPF2Q9HAU5 AL606834.2-201ENST00000602954 668 ntBASIC3.49□□□□□ -1.85
UPF2Q9HAU5 AC112187.2-201ENST00000604345 283 ntBASIC3.49□□□□□ -1.85
UPF2Q9HAU5 AL590282.1-201ENST00000610379 1136 ntBASIC3.49□□□□□ -1.85
UPF2Q9HAU5 AL359198.2-201ENST00000611836 194 ntBASIC3.49□□□□□ -1.85
UPF2Q9HAU5 AC015967.1-201ENST00000619893 476 ntBASIC3.49□□□□□ -1.85
UPF2Q9HAU5 AC068792.1-201ENST00000621354 417 ntBASIC3.49□□□□□ -1.85
UPF2Q9HAU5 AC093591.3-201ENST00000634516 308 ntBASIC3.49□□□□□ -1.85
UPF2Q9HAU5 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
UPF2Q9HAU5 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.49□□□□□ -1.85
UPF2Q9HAU5 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.49□□□□□ -1.85
UPF2Q9HAU5 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
UPF2Q9HAU5 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
UPF2Q9HAU5 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.48□□□□□ -1.85
UPF2Q9HAU5 SNORA71.3-201ENST00000362582 128 ntBASIC3.48□□□□□ -1.85
UPF2Q9HAU5 RNU6-989P-201ENST00000362756 107 ntBASIC3.48□□□□□ -1.85
UPF2Q9HAU5 RNU6-744P-201ENST00000365557 107 ntBASIC3.48□□□□□ -1.85
UPF2Q9HAU5 RNU6-629P-201ENST00000384061 103 ntBASIC3.48□□□□□ -1.85
UPF2Q9HAU5 RNU6-1316P-201ENST00000384242 108 ntBASIC3.48□□□□□ -1.85
UPF2Q9HAU5 Y_RNA.517-201ENST00000384551 106 ntBASIC3.48□□□□□ -1.85
UPF2Q9HAU5 MTND4LP20-201ENST00000402379 270 ntBASIC3.48□□□□□ -1.85
UPF2Q9HAU5 MIR1305-201ENST00000408300 86 ntBASIC3.48□□□□□ -1.85
UPF2Q9HAU5 RN7SKP220-201ENST00000410611 288 ntBASIC3.48□□□□□ -1.85
UPF2Q9HAU5 Y_RNA.619-201ENST00000410951 90 ntBASIC3.48□□□□□ -1.85
UPF2Q9HAU5 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.48□□□□□ -1.85
UPF2Q9HAU5 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.48□□□□□ -1.85
UPF2Q9HAU5 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.48□□□□□ -1.85
UPF2Q9HAU5 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.48□□□□□ -1.85
UPF2Q9HAU5 AC010975.2-201ENST00000427781 588 ntBASIC3.48□□□□□ -1.85
UPF2Q9HAU5 EZH2P1-201ENST00000431167 291 ntBASIC3.48□□□□□ -1.85
UPF2Q9HAU5 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.48□□□□□ -1.85
UPF2Q9HAU5 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.48□□□□□ -1.85
UPF2Q9HAU5 HMGN2P20-201ENST00000437531 273 ntBASIC3.48□□□□□ -1.85
UPF2Q9HAU5 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.48□□□□□ -1.85
UPF2Q9HAU5 PGBD4P3-201ENST00000440731 581 ntBASIC3.48□□□□□ -1.85
UPF2Q9HAU5 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.48□□□□□ -1.85
UPF2Q9HAU5 SSXP1-201ENST00000453640 473 ntBASIC3.48□□□□□ -1.85
UPF2Q9HAU5 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.48□□□□□ -1.85
UPF2Q9HAU5 MTCO1P42-201ENST00000457379 726 ntBASIC3.48□□□□□ -1.85
UPF2Q9HAU5 AC091153.1-201ENST00000466297 402 ntBASIC3.48□□□□□ -1.85
UPF2Q9HAU5 AC010285.1-201ENST00000470580 392 ntBASIC3.48□□□□□ -1.85
UPF2Q9HAU5 RPL9P33-201ENST00000484311 566 ntBASIC3.48□□□□□ -1.85
UPF2Q9HAU5 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.48□□□□□ -1.85
UPF2Q9HAU5 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.48□□□□□ -1.85
UPF2Q9HAU5 AC022447.3-201ENST00000506865 495 ntBASIC3.48□□□□□ -1.85
UPF2Q9HAU5 AC024589.1-201ENST00000512207 263 ntBASIC3.48□□□□□ -1.85
UPF2Q9HAU5 AF131216.2-201ENST00000512316 564 ntBASIC3.48□□□□□ -1.85
UPF2Q9HAU5 RNU6-405P-201ENST00000516637 110 ntBASIC3.48□□□□□ -1.85
UPF2Q9HAU5 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
UPF2Q9HAU5 AP003122.4-201ENST00000530980 758 ntBASIC3.48□□□□□ -1.85
UPF2Q9HAU5 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.48□□□□□ -1.85
UPF2Q9HAU5 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.48□□□□□ -1.85
UPF2Q9HAU5 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.48□□□□□ -1.85
UPF2Q9HAU5 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.48□□□□□ -1.85
UPF2Q9HAU5 EIF1P4-201ENST00000572664 335 ntBASIC3.48□□□□□ -1.85
UPF2Q9HAU5 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.48□□□□□ -1.85
UPF2Q9HAU5 AC079089.3-201ENST00000603094 673 ntBASIC3.48□□□□□ -1.85
UPF2Q9HAU5 AC073648.5-201ENST00000603502 305 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms