Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AL445687.1-201ENST00000439946 251 ntBASIC2.41□□□□□ -2.02
UPF3BQ9BZI7 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.41□□□□□ -2.02
UPF3BQ9BZI7 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
UPF3BQ9BZI7 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.41□□□□□ -2.02
UPF3BQ9BZI7 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.41□□□□□ -2.02
UPF3BQ9BZI7 RNU1-40P-201ENST00000516816 164 ntBASIC2.41□□□□□ -2.02
UPF3BQ9BZI7 RNU1-97P-201ENST00000516872 164 ntBASIC2.41□□□□□ -2.02
UPF3BQ9BZI7 GLYCAM1-201ENST00000546596 285 ntBASIC2.41□□□□□ -2.02
UPF3BQ9BZI7 SETP7-201ENST00000552169 453 ntBASIC2.41□□□□□ -2.02
UPF3BQ9BZI7 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.41□□□□□ -2.02
UPF3BQ9BZI7 SULT1C2P1-202ENST00000562418 459 ntBASIC2.41□□□□□ -2.02
UPF3BQ9BZI7 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC2.41□□□□□ -2.02
UPF3BQ9BZI7 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.41□□□□□ -2.02
UPF3BQ9BZI7 AL020997.3-201ENST00000602843 359 ntBASIC2.41□□□□□ -2.02
UPF3BQ9BZI7 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
UPF3BQ9BZI7 AP005137.2-201ENST00000609238 400 ntBASIC2.41□□□□□ -2.02
UPF3BQ9BZI7 AC009318.2-201ENST00000610917 651 ntBASIC2.41□□□□□ -2.02
UPF3BQ9BZI7 AP003399.1-201ENST00000637534 361 ntBASIC2.41□□□□□ -2.02
UPF3BQ9BZI7 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
UPF3BQ9BZI7 MFSD8-213ENST00000641134 1327 ntBASIC2.41□□□□□ -2.02
UPF3BQ9BZI7 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
UPF3BQ9BZI7 DBF4P1-201ENST00000412976 1892 ntBASIC2.4□□□□□ -2.03
UPF3BQ9BZI7 Y_RNA.355-201ENST00000365462 98 ntBASIC2.4□□□□□ -2.03
UPF3BQ9BZI7 NPM1P10-201ENST00000398310 865 ntBASIC2.4□□□□□ -2.03
UPF3BQ9BZI7 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC2.4□□□□□ -2.03
UPF3BQ9BZI7 HMGN2P38-201ENST00000423806 265 ntBASIC2.4□□□□□ -2.03
UPF3BQ9BZI7 IPO7P1-201ENST00000442031 636 ntBASIC2.4□□□□□ -2.03
UPF3BQ9BZI7 COX6CP12-201ENST00000446748 202 ntBASIC2.4□□□□□ -2.03
UPF3BQ9BZI7 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.4□□□□□ -2.03
UPF3BQ9BZI7 AC245517.4-201ENST00000448601 281 ntBASIC2.4□□□□□ -2.03
UPF3BQ9BZI7 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.4□□□□□ -2.03
UPF3BQ9BZI7 AL139109.1-201ENST00000455491 297 ntBASIC2.4□□□□□ -2.03
UPF3BQ9BZI7 SNRPGP9-201ENST00000456025 225 ntBASIC2.4□□□□□ -2.03
UPF3BQ9BZI7 snoU13.28-201ENST00000459235 104 ntBASIC2.4□□□□□ -2.03
UPF3BQ9BZI7 RNU6-1282P-201ENST00000516735 96 ntBASIC2.4□□□□□ -2.03
UPF3BQ9BZI7 SNORA31.18-201ENST00000517043 134 ntBASIC2.4□□□□□ -2.03
UPF3BQ9BZI7 OR5AK1P-201ENST00000524837 922 ntBASIC2.4□□□□□ -2.03
UPF3BQ9BZI7 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.4□□□□□ -2.03
UPF3BQ9BZI7 MIR5089-201ENST00000580047 84 ntBASIC2.4□□□□□ -2.03
UPF3BQ9BZI7 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC2.4□□□□□ -2.03
UPF3BQ9BZI7 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.4□□□□□ -2.03
UPF3BQ9BZI7 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.4□□□□□ -2.03
UPF3BQ9BZI7 AL356280.1-201ENST00000603614 379 ntBASIC2.4□□□□□ -2.03
UPF3BQ9BZI7 AC120053.1-201ENST00000607706 736 ntBASIC2.4□□□□□ -2.03
UPF3BQ9BZI7 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
UPF3BQ9BZI7 MTND4P1-201ENST00000457501 1466 ntBASIC2.39□□□□□ -2.03
UPF3BQ9BZI7 AL596028.1-201ENST00000326971 197 ntBASIC2.39□□□□□ -2.03
UPF3BQ9BZI7 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.39□□□□□ -2.03
UPF3BQ9BZI7 RNU1-17P-201ENST00000363022 152 ntBASIC2.39□□□□□ -2.03
UPF3BQ9BZI7 RNU6-1035P-201ENST00000384477 107 ntBASIC2.39□□□□□ -2.03
UPF3BQ9BZI7 U8.13-201ENST00000390842 128 ntBASIC2.39□□□□□ -2.03
UPF3BQ9BZI7 TRIM60P5Y-201ENST00000413946 574 ntBASIC2.39□□□□□ -2.03
UPF3BQ9BZI7 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.39□□□□□ -2.03
UPF3BQ9BZI7 MORF4L1P7-201ENST00000426038 703 ntBASIC2.39□□□□□ -2.03
UPF3BQ9BZI7 AC092573.2-201ENST00000434546 243 ntBASIC2.39□□□□□ -2.03
UPF3BQ9BZI7 UBE2V1P13-201ENST00000436983 439 ntBASIC2.39□□□□□ -2.03
UPF3BQ9BZI7 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.39□□□□□ -2.03
UPF3BQ9BZI7 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.39□□□□□ -2.03
UPF3BQ9BZI7 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.39□□□□□ -2.03
UPF3BQ9BZI7 AL049714.1-201ENST00000466686 347 ntBASIC2.39□□□□□ -2.03
UPF3BQ9BZI7 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.39□□□□□ -2.03
UPF3BQ9BZI7 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.39□□□□□ -2.03
UPF3BQ9BZI7 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.39□□□□□ -2.03
UPF3BQ9BZI7 RNA5SP445-201ENST00000515889 115 ntBASIC2.39□□□□□ -2.03
UPF3BQ9BZI7 RNU6-798P-201ENST00000516912 103 ntBASIC2.39□□□□□ -2.03
UPF3BQ9BZI7 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC2.39□□□□□ -2.03
UPF3BQ9BZI7 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.39□□□□□ -2.03
UPF3BQ9BZI7 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.39□□□□□ -2.03
UPF3BQ9BZI7 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.39□□□□□ -2.03
UPF3BQ9BZI7 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.39□□□□□ -2.03
UPF3BQ9BZI7 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.39□□□□□ -2.03
UPF3BQ9BZI7 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.39□□□□□ -2.03
UPF3BQ9BZI7 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.39□□□□□ -2.03
UPF3BQ9BZI7 AC015688.2-201ENST00000584523 262 ntBASIC2.39□□□□□ -2.03
UPF3BQ9BZI7 AC105224.1-201ENST00000587055 421 ntBASIC2.39□□□□□ -2.03
UPF3BQ9BZI7 AC005498.1-201ENST00000592125 465 ntBASIC2.39□□□□□ -2.03
UPF3BQ9BZI7 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.39□□□□□ -2.03
UPF3BQ9BZI7 GAS5-AS1-201ENST00000602767 694 ntBASIC2.39□□□□□ -2.03
UPF3BQ9BZI7 AC005539.1-201ENST00000443768 1479 ntBASIC2.39□□□□□ -2.03
UPF3BQ9BZI7 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
UPF3BQ9BZI7 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
UPF3BQ9BZI7 RNU6-270P-201ENST00000364131 105 ntBASIC2.38□□□□□ -2.03
UPF3BQ9BZI7 Y_RNA.796-201ENST00000364268 102 ntBASIC2.38□□□□□ -2.03
UPF3BQ9BZI7 Y_RNA.799-201ENST00000364992 102 ntBASIC2.38□□□□□ -2.03
UPF3BQ9BZI7 AL355615.1-201ENST00000406187 641 ntBASIC2.38□□□□□ -2.03
UPF3BQ9BZI7 RNU2-2P-201ENST00000410396 191 ntBASIC2.38□□□□□ -2.03
UPF3BQ9BZI7 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.38□□□□□ -2.03
UPF3BQ9BZI7 NDUFA5P4-201ENST00000436704 385 ntBASIC2.38□□□□□ -2.03
UPF3BQ9BZI7 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.38□□□□□ -2.03
UPF3BQ9BZI7 CBWD4P-201ENST00000445695 655 ntBASIC2.38□□□□□ -2.03
UPF3BQ9BZI7 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.38□□□□□ -2.03
UPF3BQ9BZI7 RFC5P1-201ENST00000454419 874 ntBASIC2.38□□□□□ -2.03
UPF3BQ9BZI7 RPL32P14-201ENST00000463196 378 ntBASIC2.38□□□□□ -2.03
UPF3BQ9BZI7 RPL31P60-201ENST00000478450 367 ntBASIC2.38□□□□□ -2.03
UPF3BQ9BZI7 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.38□□□□□ -2.03
UPF3BQ9BZI7 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.38□□□□□ -2.03
UPF3BQ9BZI7 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.38□□□□□ -2.03
UPF3BQ9BZI7 TRAV28-201ENST00000557548 323 ntBASIC2.38□□□□□ -2.03
UPF3BQ9BZI7 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.38□□□□□ -2.03
UPF3BQ9BZI7 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms