Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
HERPUD2Q9BSE4 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HERPUD2Q9BSE4 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
HERPUD2Q9BSE4 RNU6-195P-201ENST00000411352 109 ntBASIC3.75□□□□□ -1.81
HERPUD2Q9BSE4 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.75□□□□□ -1.81
HERPUD2Q9BSE4 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.75□□□□□ -1.81
HERPUD2Q9BSE4 DBIP2-201ENST00000419076 262 ntBASIC3.75□□□□□ -1.81
HERPUD2Q9BSE4 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.75□□□□□ -1.81
HERPUD2Q9BSE4 OR2AS1P-201ENST00000427827 319 ntBASIC3.75□□□□□ -1.81
HERPUD2Q9BSE4 AC093106.2-201ENST00000428212 385 ntBASIC3.75□□□□□ -1.81
HERPUD2Q9BSE4 GPM6BP2-201ENST00000432046 144 ntBASIC3.75□□□□□ -1.81
HERPUD2Q9BSE4 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.75□□□□□ -1.81
HERPUD2Q9BSE4 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.75□□□□□ -1.81
HERPUD2Q9BSE4 AC009961.2-201ENST00000435771 251 ntBASIC3.75□□□□□ -1.81
HERPUD2Q9BSE4 RPS24P1-201ENST00000438550 371 ntBASIC3.75□□□□□ -1.81
HERPUD2Q9BSE4 HMGB3P12-201ENST00000438745 556 ntBASIC3.75□□□□□ -1.81
HERPUD2Q9BSE4 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.75□□□□□ -1.81
HERPUD2Q9BSE4 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.75□□□□□ -1.81
HERPUD2Q9BSE4 AC244505.5-201ENST00000443639 207 ntBASIC3.75□□□□□ -1.81
HERPUD2Q9BSE4 GPM6BP1-201ENST00000446387 144 ntBASIC3.75□□□□□ -1.81
HERPUD2Q9BSE4 PRDX3P3-201ENST00000447765 522 ntBASIC3.75□□□□□ -1.81
HERPUD2Q9BSE4 RAP1BP2-201ENST00000478270 544 ntBASIC3.75□□□□□ -1.81
HERPUD2Q9BSE4 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.75□□□□□ -1.81
HERPUD2Q9BSE4 ARL2BPP4-201ENST00000506854 471 ntBASIC3.75□□□□□ -1.81
HERPUD2Q9BSE4 RNU6-143P-201ENST00000516942 93 ntBASIC3.75□□□□□ -1.81
HERPUD2Q9BSE4 RN7SKP60-201ENST00000516985 239 ntBASIC3.75□□□□□ -1.81
HERPUD2Q9BSE4 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.75□□□□□ -1.81
HERPUD2Q9BSE4 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.75□□□□□ -1.81
HERPUD2Q9BSE4 DNAJC8P1-201ENST00000554535 372 ntBASIC3.75□□□□□ -1.81
HERPUD2Q9BSE4 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.75□□□□□ -1.81
HERPUD2Q9BSE4 AC068135.2-201ENST00000569293 1028 ntBASIC3.75□□□□□ -1.81
HERPUD2Q9BSE4 MTCO3P24-201ENST00000572729 782 ntBASIC3.75□□□□□ -1.81
HERPUD2Q9BSE4 MIR3158-1-201ENST00000583596 81 ntBASIC3.75□□□□□ -1.81
HERPUD2Q9BSE4 AC067852.3-201ENST00000589177 561 ntBASIC3.75□□□□□ -1.81
HERPUD2Q9BSE4 AC007363.1-201ENST00000604736 620 ntBASIC3.75□□□□□ -1.81
HERPUD2Q9BSE4 AP002360.4-201ENST00000606980 481 ntBASIC3.75□□□□□ -1.81
HERPUD2Q9BSE4 FTX_3.1-201ENST00000610451 147 ntBASIC3.75□□□□□ -1.81
HERPUD2Q9BSE4 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.75□□□□□ -1.81
HERPUD2Q9BSE4 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.75□□□□□ -1.81
HERPUD2Q9BSE4 AC006133.1-201ENST00000617106 264 ntBASIC3.75□□□□□ -1.81
HERPUD2Q9BSE4 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.75□□□□□ -1.81
HERPUD2Q9BSE4 AL732618.1-201ENST00000623251 301 ntBASIC3.75□□□□□ -1.81
HERPUD2Q9BSE4 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.75□□□□□ -1.81
HERPUD2Q9BSE4 AC090582.1-201ENST00000636321 199 ntBASIC3.75□□□□□ -1.81
HERPUD2Q9BSE4 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HERPUD2Q9BSE4 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HERPUD2Q9BSE4 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.74□□□□□ -1.81
HERPUD2Q9BSE4 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HERPUD2Q9BSE4 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HERPUD2Q9BSE4 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
HERPUD2Q9BSE4 RNU6-288P-201ENST00000363690 104 ntBASIC3.74□□□□□ -1.81
HERPUD2Q9BSE4 RNU6-512P-201ENST00000364438 103 ntBASIC3.74□□□□□ -1.81
HERPUD2Q9BSE4 CD24P4-201ENST00000382840 243 ntBASIC3.74□□□□□ -1.81
HERPUD2Q9BSE4 Y_RNA.553-201ENST00000384670 102 ntBASIC3.74□□□□□ -1.81
HERPUD2Q9BSE4 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
HERPUD2Q9BSE4 RNU6-817P-201ENST00000391083 104 ntBASIC3.74□□□□□ -1.81
HERPUD2Q9BSE4 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HERPUD2Q9BSE4 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.74□□□□□ -1.81
HERPUD2Q9BSE4 AL136116.1-201ENST00000403591 381 ntBASIC3.74□□□□□ -1.81
HERPUD2Q9BSE4 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.74□□□□□ -1.81
HERPUD2Q9BSE4 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
HERPUD2Q9BSE4 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.74□□□□□ -1.81
HERPUD2Q9BSE4 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.74□□□□□ -1.81
HERPUD2Q9BSE4 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.74□□□□□ -1.81
HERPUD2Q9BSE4 ELOCP14-201ENST00000428070 331 ntBASIC3.74□□□□□ -1.81
HERPUD2Q9BSE4 ELOCP7-201ENST00000439968 331 ntBASIC3.74□□□□□ -1.81
HERPUD2Q9BSE4 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.74□□□□□ -1.81
HERPUD2Q9BSE4 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.74□□□□□ -1.81
HERPUD2Q9BSE4 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.74□□□□□ -1.81
HERPUD2Q9BSE4 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.74□□□□□ -1.81
HERPUD2Q9BSE4 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.74□□□□□ -1.81
HERPUD2Q9BSE4 RPL21P8-201ENST00000465083 535 ntBASIC3.74□□□□□ -1.81
HERPUD2Q9BSE4 SNORA67.7-201ENST00000516664 135 ntBASIC3.74□□□□□ -1.81
HERPUD2Q9BSE4 SNORA70.18-201ENST00000516696 98 ntBASIC3.74□□□□□ -1.81
HERPUD2Q9BSE4 RNA5SP471-201ENST00000516971 106 ntBASIC3.74□□□□□ -1.81
HERPUD2Q9BSE4 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.74□□□□□ -1.81
HERPUD2Q9BSE4 NDUFB9P3-201ENST00000521269 501 ntBASIC3.74□□□□□ -1.81
HERPUD2Q9BSE4 AC022616.3-201ENST00000523940 148 ntBASIC3.74□□□□□ -1.81
HERPUD2Q9BSE4 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.74□□□□□ -1.81
HERPUD2Q9BSE4 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.74□□□□□ -1.81
HERPUD2Q9BSE4 AC087883.1-201ENST00000551882 391 ntBASIC3.74□□□□□ -1.81
HERPUD2Q9BSE4 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.74□□□□□ -1.81
HERPUD2Q9BSE4 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.74□□□□□ -1.81
HERPUD2Q9BSE4 AC006362.1-201ENST00000567392 174 ntBASIC3.74□□□□□ -1.81
HERPUD2Q9BSE4 MIR5187-201ENST00000583479 76 ntBASIC3.74□□□□□ -1.81
HERPUD2Q9BSE4 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.74□□□□□ -1.81
HERPUD2Q9BSE4 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.74□□□□□ -1.81
HERPUD2Q9BSE4 AL161798.1-201ENST00000604630 131 ntBASIC3.74□□□□□ -1.81
HERPUD2Q9BSE4 AC006077.1-201ENST00000604746 343 ntBASIC3.74□□□□□ -1.81
HERPUD2Q9BSE4 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.74□□□□□ -1.81
HERPUD2Q9BSE4 AC004852.3-201ENST00000614131 326 ntBASIC3.74□□□□□ -1.81
HERPUD2Q9BSE4 AC039056.2-201ENST00000622261 511 ntBASIC3.74□□□□□ -1.81
HERPUD2Q9BSE4 CR392039.5-201ENST00000623201 510 ntBASIC3.74□□□□□ -1.81
HERPUD2Q9BSE4 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.74□□□□□ -1.81
HERPUD2Q9BSE4 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HERPUD2Q9BSE4 AC110774.1-201ENST00000623567 2018 ntBASIC3.73□□□□□ -1.81
HERPUD2Q9BSE4 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
HERPUD2Q9BSE4 AC007823.1-201ENST00000569932 1566 ntBASIC3.73□□□□□ -1.81
HERPUD2Q9BSE4 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HERPUD2Q9BSE4 RNU6-799P-201ENST00000363567 107 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms