Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 AC092989.1-201ENST00000481235 277 ntBASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 AC108860.1-201ENST00000484521 383 ntBASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 AC019235.1-201ENST00000503847 207 ntBASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 AC026427.2-201ENST00000506228 536 ntBASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 BTF3L4P4-201ENST00000506381 449 ntBASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 AC005921.1-201ENST00000510589 286 ntBASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 SNORA70.24-201ENST00000517233 118 ntBASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 IGKV2-26-201ENST00000518305 343 ntBASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 AP003034.1-201ENST00000534621 422 ntBASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 HMGB1P33-201ENST00000563485 527 ntBASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 KLKP1-201ENST00000595979 403 ntBASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 AC007363.1-201ENST00000604736 620 ntBASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 MIR7851-201ENST00000610611 160 ntBASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 AL158196.1-201ENST00000616786 434 ntBASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 AL732372.2-225ENST00000642124 456 ntBASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 AC009812.4-201ENST00000569134 1805 ntBASIC3.77□□□□□ -1.81
PAAF1Q9BRP4 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 AC007390.2-201ENST00000606229 3803 ntBASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 AC018529.3-201ENST00000624212 2254 ntBASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 MIR448-201ENST00000362131 111 ntBASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 RN7SKP44-201ENST00000363602 316 ntBASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 RNA5SP42-201ENST00000364278 115 ntBASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 Y_RNA.453-201ENST00000384223 109 ntBASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 MIR558-201ENST00000384920 94 ntBASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 MIR607-201ENST00000385241 96 ntBASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 RNU2-39P-201ENST00000410604 198 ntBASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 RNA5SP39-201ENST00000411245 120 ntBASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 RPL21P109-201ENST00000422213 475 ntBASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 AC008850.1-201ENST00000427546 362 ntBASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 MED13P1-201ENST00000428342 171 ntBASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 AC005326.1-201ENST00000429197 123 ntBASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 MRPS10P2-201ENST00000431226 381 ntBASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 AL596276.1-201ENST00000434465 418 ntBASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 RPS20P5-201ENST00000434808 360 ntBASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 AL138799.3-201ENST00000438968 350 ntBASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 AL121769.1-201ENST00000469473 401 ntBASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 RPL23AP55-201ENST00000498163 452 ntBASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 AC025445.1-201ENST00000502728 300 ntBASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 RNU2-27P-201ENST00000516185 142 ntBASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 OR5AQ1P-201ENST00000527596 927 ntBASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 AP004242.1-201ENST00000533701 349 ntBASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 AC135001.1-201ENST00000544546 283 ntBASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 AL359212.1-201ENST00000556608 614 ntBASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 AL606834.2-201ENST00000602954 668 ntBASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 AC025449.1-201ENST00000603896 529 ntBASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 AC017083.3-201ENST00000609955 700 ntBASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 AP003355.3-201ENST00000623465 114 ntBASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 MIR3651-201ENST00000630427 90 ntBASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
PAAF1Q9BRP4 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 AC018555.1-201ENST00000567548 1980 ntBASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 Y_RNA.159-201ENST00000363674 87 ntBASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 RNU1-39P-201ENST00000383897 165 ntBASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 Y_RNA.402-201ENST00000383972 102 ntBASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 RNU6-780P-201ENST00000391030 104 ntBASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.75□□□□□ -1.81
PAAF1Q9BRP4 USP9YP27-201ENST00000418455 438 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms