Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.27□□□□□ -2.21
VPS25Q9BRG1 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.27□□□□□ -2.21
VPS25Q9BRG1 AC004217.3-201ENST00000551552 878 ntBASIC1.27□□□□□ -2.21
VPS25Q9BRG1 CFL2-206ENST00000556161 546 ntTSL 4 BASIC1.27□□□□□ -2.21
VPS25Q9BRG1 AC008269.2-201ENST00000561915 1105 ntBASIC1.27□□□□□ -2.21
VPS25Q9BRG1 AC233702.2-202ENST00000562547 291 ntBASIC1.27□□□□□ -2.21
VPS25Q9BRG1 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC1.27□□□□□ -2.21
VPS25Q9BRG1 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC1.27□□□□□ -2.21
VPS25Q9BRG1 MIR3618-201ENST00000580330 88 ntBASIC1.27□□□□□ -2.21
VPS25Q9BRG1 AC024220.1-201ENST00000603675 484 ntBASIC1.27□□□□□ -2.21
VPS25Q9BRG1 AC016925.2-201ENST00000605108 242 ntBASIC1.27□□□□□ -2.21
VPS25Q9BRG1 AC103810.6-201ENST00000606708 136 ntBASIC1.27□□□□□ -2.21
VPS25Q9BRG1 STMN1P1-201ENST00000617809 440 ntBASIC1.27□□□□□ -2.21
VPS25Q9BRG1 OR8B1P-202ENST00000641132 1178 ntBASIC1.27□□□□□ -2.21
VPS25Q9BRG1 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC1.27□□□□□ -2.21
VPS25Q9BRG1 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
VPS25Q9BRG1 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.26□□□□□ -2.21
VPS25Q9BRG1 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.26□□□□□ -2.21
VPS25Q9BRG1 HMGB1P17-201ENST00000403495 628 ntBASIC1.26□□□□□ -2.21
VPS25Q9BRG1 SNORA11B-201ENST00000408175 129 ntBASIC1.26□□□□□ -2.21
VPS25Q9BRG1 RPL36AP36-201ENST00000418616 301 ntBASIC1.26□□□□□ -2.21
VPS25Q9BRG1 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.26□□□□□ -2.21
VPS25Q9BRG1 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC1.26□□□□□ -2.21
VPS25Q9BRG1 BX276092.3-201ENST00000424182 230 ntBASIC1.26□□□□□ -2.21
VPS25Q9BRG1 AC007742.1-201ENST00000425789 329 ntBASIC1.26□□□□□ -2.21
VPS25Q9BRG1 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1.26□□□□□ -2.21
VPS25Q9BRG1 ELOCP26-201ENST00000436067 329 ntBASIC1.26□□□□□ -2.21
VPS25Q9BRG1 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.26□□□□□ -2.21
VPS25Q9BRG1 BX510359.1-201ENST00000456973 237 ntBASIC1.26□□□□□ -2.21
VPS25Q9BRG1 RPL21P99-201ENST00000480369 423 ntBASIC1.26□□□□□ -2.21
VPS25Q9BRG1 AC068587.1-201ENST00000483613 781 ntBASIC1.26□□□□□ -2.21
VPS25Q9BRG1 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.26□□□□□ -2.21
VPS25Q9BRG1 RNA5SP165-201ENST00000517142 115 ntBASIC1.26□□□□□ -2.21
VPS25Q9BRG1 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.26□□□□□ -2.21
VPS25Q9BRG1 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.26□□□□□ -2.21
VPS25Q9BRG1 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.26□□□□□ -2.21
VPS25Q9BRG1 AC084033.1-201ENST00000550830 633 ntBASIC1.26□□□□□ -2.21
VPS25Q9BRG1 ARL2BPP2-201ENST00000550907 489 ntBASIC1.26□□□□□ -2.21
VPS25Q9BRG1 MIR5007-201ENST00000583098 95 ntBASIC1.26□□□□□ -2.21
VPS25Q9BRG1 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.26□□□□□ -2.21
VPS25Q9BRG1 VN1R90P-201ENST00000595717 726 ntBASIC1.26□□□□□ -2.21
VPS25Q9BRG1 AC125494.3-201ENST00000602759 455 ntBASIC1.26□□□□□ -2.21
VPS25Q9BRG1 BNIP3P4-201ENST00000604946 565 ntBASIC1.26□□□□□ -2.21
VPS25Q9BRG1 AC007349.4-201ENST00000608114 532 ntBASIC1.26□□□□□ -2.21
VPS25Q9BRG1 AL138478.1-201ENST00000612252 832 ntBASIC1.26□□□□□ -2.21
VPS25Q9BRG1 AC009159.1-201ENST00000618386 642 ntBASIC1.26□□□□□ -2.21
VPS25Q9BRG1 AC024581.2-201ENST00000619986 252 ntBASIC1.26□□□□□ -2.21
VPS25Q9BRG1 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC1.26□□□□□ -2.21
VPS25Q9BRG1 AC024595.1-201ENST00000623088 387 ntBASIC1.26□□□□□ -2.21
VPS25Q9BRG1 AL137790.1-201ENST00000634283 177 ntBASIC1.26□□□□□ -2.21
VPS25Q9BRG1 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.26□□□□□ -2.21
VPS25Q9BRG1 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
VPS25Q9BRG1 MTND5P30-201ENST00000452896 1731 ntBASIC1.26□□□□□ -2.21
VPS25Q9BRG1 AL356292.1-201ENST00000283110 373 ntBASIC1.25□□□□□ -2.21
VPS25Q9BRG1 RNU1-62P-201ENST00000362599 164 ntBASIC1.25□□□□□ -2.21
VPS25Q9BRG1 SNORA70.4-201ENST00000365509 134 ntBASIC1.25□□□□□ -2.21
VPS25Q9BRG1 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.25□□□□□ -2.21
VPS25Q9BRG1 RNU6-338P-201ENST00000383888 105 ntBASIC1.25□□□□□ -2.21
VPS25Q9BRG1 MIR518C-201ENST00000384822 101 ntBASIC1.25□□□□□ -2.21
VPS25Q9BRG1 MIR34A-201ENST00000385130 110 ntBASIC1.25□□□□□ -2.21
VPS25Q9BRG1 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
VPS25Q9BRG1 ZNF92P1Y-201ENST00000415010 1191 ntBASIC1.25□□□□□ -2.21
VPS25Q9BRG1 EIF1AXP1-201ENST00000419267 435 ntBASIC1.25□□□□□ -2.21
VPS25Q9BRG1 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.25□□□□□ -2.21
VPS25Q9BRG1 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
VPS25Q9BRG1 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC1.25□□□□□ -2.21
VPS25Q9BRG1 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.25□□□□□ -2.21
VPS25Q9BRG1 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC1.25□□□□□ -2.21
VPS25Q9BRG1 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.25□□□□□ -2.21
VPS25Q9BRG1 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.25□□□□□ -2.21
VPS25Q9BRG1 RPS29P23-201ENST00000458635 123 ntBASIC1.25□□□□□ -2.21
VPS25Q9BRG1 AC092757.1-201ENST00000467293 467 ntBASIC1.25□□□□□ -2.21
VPS25Q9BRG1 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.25□□□□□ -2.21
VPS25Q9BRG1 MTCO1P31-201ENST00000506355 492 ntBASIC1.25□□□□□ -2.21
VPS25Q9BRG1 AC113420.1-201ENST00000507903 571 ntBASIC1.25□□□□□ -2.21
VPS25Q9BRG1 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.25□□□□□ -2.21
VPS25Q9BRG1 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.25□□□□□ -2.21
VPS25Q9BRG1 AC104997.1-201ENST00000519761 717 ntBASIC1.25□□□□□ -2.21
VPS25Q9BRG1 UBTFL10-201ENST00000528532 562 ntBASIC1.25□□□□□ -2.21
VPS25Q9BRG1 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.25□□□□□ -2.21
VPS25Q9BRG1 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC1.25□□□□□ -2.21
VPS25Q9BRG1 AL031274.2-201ENST00000599419 203 ntBASIC1.25□□□□□ -2.21
VPS25Q9BRG1 AL161729.4-201ENST00000604650 476 ntBASIC1.25□□□□□ -2.21
VPS25Q9BRG1 AC079610.2-201ENST00000604818 690 ntBASIC1.25□□□□□ -2.21
VPS25Q9BRG1 AL391597.1-201ENST00000618707 694 ntBASIC1.25□□□□□ -2.21
VPS25Q9BRG1 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC1.25□□□□□ -2.21
VPS25Q9BRG1 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC1.25□□□□□ -2.21
VPS25Q9BRG1 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.25□□□□□ -2.21
VPS25Q9BRG1 SNORA16.1-201ENST00000364597 132 ntBASIC1.24□□□□□ -2.21
VPS25Q9BRG1 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
VPS25Q9BRG1 MIR518A2-201ENST00000384966 87 ntBASIC1.24□□□□□ -2.21
VPS25Q9BRG1 MIR449B-201ENST00000384995 97 ntBASIC1.24□□□□□ -2.21
VPS25Q9BRG1 SNORA40.19-201ENST00000390846 128 ntBASIC1.24□□□□□ -2.21
VPS25Q9BRG1 ATP5F1P6-201ENST00000402768 767 ntBASIC1.24□□□□□ -2.21
VPS25Q9BRG1 SNORA11.4-201ENST00000408823 129 ntBASIC1.24□□□□□ -2.21
VPS25Q9BRG1 RNU2-43P-201ENST00000410306 190 ntBASIC1.24□□□□□ -2.21
VPS25Q9BRG1 RNA5SP425-201ENST00000410336 112 ntBASIC1.24□□□□□ -2.21
VPS25Q9BRG1 RNU6-516P-201ENST00000411381 104 ntBASIC1.24□□□□□ -2.21
VPS25Q9BRG1 RPS24P7-201ENST00000416921 246 ntBASIC1.24□□□□□ -2.21
VPS25Q9BRG1 AC074117.2-201ENST00000417130 397 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms