Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 AC104472.2-201ENST00000469035 601 ntBASIC2.6□□□□□ -1.99
EBF4Q9BQW3 RN7SL601P-201ENST00000471221 293 ntBASIC2.6□□□□□ -1.99
EBF4Q9BQW3 SETP11-201ENST00000473027 690 ntBASIC2.6□□□□□ -1.99
EBF4Q9BQW3 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
EBF4Q9BQW3 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.6□□□□□ -1.99
EBF4Q9BQW3 AC104685.1-201ENST00000502445 371 ntBASIC2.6□□□□□ -1.99
EBF4Q9BQW3 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.6□□□□□ -1.99
EBF4Q9BQW3 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.6□□□□□ -1.99
EBF4Q9BQW3 AC034159.1-201ENST00000513885 583 ntBASIC2.6□□□□□ -1.99
EBF4Q9BQW3 AC060788.1-201ENST00000521318 469 ntBASIC2.6□□□□□ -1.99
EBF4Q9BQW3 AC100870.1-201ENST00000522035 505 ntBASIC2.6□□□□□ -1.99
EBF4Q9BQW3 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.6□□□□□ -1.99
EBF4Q9BQW3 AC125611.2-201ENST00000551907 647 ntBASIC2.6□□□□□ -1.99
EBF4Q9BQW3 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.6□□□□□ -1.99
EBF4Q9BQW3 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
EBF4Q9BQW3 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.6□□□□□ -1.99
EBF4Q9BQW3 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.6□□□□□ -1.99
EBF4Q9BQW3 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.6□□□□□ -1.99
EBF4Q9BQW3 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.6□□□□□ -1.99
EBF4Q9BQW3 AC136618.2-201ENST00000575091 400 ntBASIC2.6□□□□□ -1.99
EBF4Q9BQW3 COX6CP3-201ENST00000580869 223 ntBASIC2.6□□□□□ -1.99
EBF4Q9BQW3 DUXAP4-201ENST00000603046 613 ntBASIC2.6□□□□□ -1.99
EBF4Q9BQW3 AC004223.4-201ENST00000612426 332 ntBASIC2.6□□□□□ -1.99
EBF4Q9BQW3 AL450472.3-201ENST00000615578 367 ntBASIC2.6□□□□□ -1.99
EBF4Q9BQW3 AC068831.7-201ENST00000616954 363 ntBASIC2.6□□□□□ -1.99
EBF4Q9BQW3 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.6□□□□□ -1.99
EBF4Q9BQW3 AC010297.1-201ENST00000623948 149 ntBASIC2.6□□□□□ -1.99
EBF4Q9BQW3 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
EBF4Q9BQW3 ELL2P3-201ENST00000457883 1602 ntBASIC2.6□□□□□ -1.99
EBF4Q9BQW3 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.6□□□□□ -1.99
EBF4Q9BQW3 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
EBF4Q9BQW3 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.59□□□□□ -1.99
EBF4Q9BQW3 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.59□□□□□ -1.99
EBF4Q9BQW3 AL161781.1-201ENST00000354277 403 ntBASIC2.59□□□□□ -1.99
EBF4Q9BQW3 Y_RNA.51-201ENST00000362725 102 ntBASIC2.59□□□□□ -1.99
EBF4Q9BQW3 VTRNA1-1-201ENST00000363120 99 ntBASIC2.59□□□□□ -1.99
EBF4Q9BQW3 RNU6-660P-201ENST00000364566 109 ntBASIC2.59□□□□□ -1.99
EBF4Q9BQW3 RNU4-75P-201ENST00000364621 146 ntBASIC2.59□□□□□ -1.99
EBF4Q9BQW3 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
EBF4Q9BQW3 RNU6-723P-201ENST00000383973 107 ntBASIC2.59□□□□□ -1.99
EBF4Q9BQW3 SNORD116-9-201ENST00000384000 95 ntBASIC2.59□□□□□ -1.99
EBF4Q9BQW3 SNORD116-3-201ENST00000384287 95 ntBASIC2.59□□□□□ -1.99
EBF4Q9BQW3 SNORD116-7-201ENST00000384404 95 ntBASIC2.59□□□□□ -1.99
EBF4Q9BQW3 SNORD116-5-201ENST00000384462 95 ntBASIC2.59□□□□□ -1.99
EBF4Q9BQW3 AL356421.1-201ENST00000403255 413 ntBASIC2.59□□□□□ -1.99
EBF4Q9BQW3 RNA5SP492-201ENST00000411330 114 ntBASIC2.59□□□□□ -1.99
EBF4Q9BQW3 BTF3L4P1-201ENST00000413813 468 ntBASIC2.59□□□□□ -1.99
EBF4Q9BQW3 AC083875.1-201ENST00000419509 405 ntBASIC2.59□□□□□ -1.99
EBF4Q9BQW3 MTND4P20-201ENST00000424125 869 ntBASIC2.59□□□□□ -1.99
EBF4Q9BQW3 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.59□□□□□ -1.99
EBF4Q9BQW3 DLGAP5P1-201ENST00000430307 464 ntBASIC2.59□□□□□ -1.99
EBF4Q9BQW3 AC022018.1-201ENST00000430685 241 ntBASIC2.59□□□□□ -1.99
EBF4Q9BQW3 RPS20P5-201ENST00000434808 360 ntBASIC2.59□□□□□ -1.99
EBF4Q9BQW3 AC092473.1-201ENST00000441098 221 ntBASIC2.59□□□□□ -1.99
EBF4Q9BQW3 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.59□□□□□ -1.99
EBF4Q9BQW3 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.59□□□□□ -1.99
EBF4Q9BQW3 AC104563.1-201ENST00000476147 376 ntBASIC2.59□□□□□ -1.99
EBF4Q9BQW3 AC017015.1-201ENST00000477387 286 ntBASIC2.59□□□□□ -1.99
EBF4Q9BQW3 SRIP1-201ENST00000489235 288 ntBASIC2.59□□□□□ -1.99
EBF4Q9BQW3 AC117522.3-201ENST00000507974 584 ntBASIC2.59□□□□□ -1.99
EBF4Q9BQW3 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
EBF4Q9BQW3 AC005178.1-201ENST00000508392 440 ntBASIC2.59□□□□□ -1.99
EBF4Q9BQW3 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.59□□□□□ -1.99
EBF4Q9BQW3 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.59□□□□□ -1.99
EBF4Q9BQW3 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.59□□□□□ -1.99
EBF4Q9BQW3 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.59□□□□□ -1.99
EBF4Q9BQW3 SNORA31.22-201ENST00000517204 135 ntBASIC2.59□□□□□ -1.99
EBF4Q9BQW3 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.59□□□□□ -1.99
EBF4Q9BQW3 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.59□□□□□ -1.99
EBF4Q9BQW3 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.59□□□□□ -1.99
EBF4Q9BQW3 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
EBF4Q9BQW3 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.59□□□□□ -1.99
EBF4Q9BQW3 AC007115.1-201ENST00000546853 234 ntBASIC2.59□□□□□ -1.99
EBF4Q9BQW3 AC007954.1-201ENST00000554198 494 ntBASIC2.59□□□□□ -1.99
EBF4Q9BQW3 ISCA1P3-201ENST00000577104 373 ntBASIC2.59□□□□□ -1.99
EBF4Q9BQW3 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC2.59□□□□□ -1.99
EBF4Q9BQW3 UBE2L4-201ENST00000587688 464 ntBASIC2.59□□□□□ -1.99
EBF4Q9BQW3 AP001429.1-201ENST00000602568 530 ntBASIC2.59□□□□□ -1.99
EBF4Q9BQW3 AC008277.2-201ENST00000605196 797 ntBASIC2.59□□□□□ -1.99
EBF4Q9BQW3 AC135507.1-201ENST00000607214 561 ntBASIC2.59□□□□□ -1.99
EBF4Q9BQW3 AC106028.5-201ENST00000610332 395 ntBASIC2.59□□□□□ -1.99
EBF4Q9BQW3 AC084782.3-201ENST00000612282 578 ntBASIC2.59□□□□□ -1.99
EBF4Q9BQW3 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.59□□□□□ -1.99
EBF4Q9BQW3 AL158801.5-201ENST00000623123 465 ntBASIC2.59□□□□□ -1.99
EBF4Q9BQW3 AC139792.2-201ENST00000624218 587 ntBASIC2.59□□□□□ -1.99
EBF4Q9BQW3 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
EBF4Q9BQW3 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.59□□□□□ -2
EBF4Q9BQW3 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -2
EBF4Q9BQW3 ZNF807-201ENST00000328088 1707 ntBASIC2.59□□□□□ -2
EBF4Q9BQW3 MAPK10-322ENST00000641485 4530 ntBASIC2.59□□□□□ -2
EBF4Q9BQW3 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.59□□□□□ -2
EBF4Q9BQW3 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
EBF4Q9BQW3 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
EBF4Q9BQW3 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.58□□□□□ -2
EBF4Q9BQW3 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.58□□□□□ -2
EBF4Q9BQW3 AL672167.1-206ENST00000356293 943 ntBASIC2.58□□□□□ -2
EBF4Q9BQW3 RNA5SP374-201ENST00000362939 125 ntBASIC2.58□□□□□ -2
EBF4Q9BQW3 Y_RNA.126-201ENST00000363382 111 ntBASIC2.58□□□□□ -2
EBF4Q9BQW3 RNU6-97P-201ENST00000363387 104 ntBASIC2.58□□□□□ -2
EBF4Q9BQW3 RNU6-173P-201ENST00000364215 104 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms