Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TM9SF2Q99805 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TM9SF2Q99805 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TM9SF2Q99805 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
TM9SF2Q99805 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
TM9SF2Q99805 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TM9SF2Q99805 SNORD73A-201ENST00000386062 65 ntBASIC4.54□□□□□ -1.68
TM9SF2Q99805 AL356057.3-201ENST00000402607 340 ntBASIC4.54□□□□□ -1.68
TM9SF2Q99805 RNA5SP146-201ENST00000410743 123 ntBASIC4.54□□□□□ -1.68
TM9SF2Q99805 COX6B1P1-201ENST00000415962 213 ntBASIC4.54□□□□□ -1.68
TM9SF2Q99805 EI24P1-201ENST00000416584 867 ntBASIC4.54□□□□□ -1.68
TM9SF2Q99805 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TM9SF2Q99805 AL353621.1-201ENST00000418219 243 ntBASIC4.54□□□□□ -1.68
TM9SF2Q99805 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC4.54□□□□□ -1.68
TM9SF2Q99805 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.54□□□□□ -1.68
TM9SF2Q99805 AL356867.1-201ENST00000429623 299 ntBASIC4.54□□□□□ -1.68
TM9SF2Q99805 AL645568.3-201ENST00000433683 316 ntBASIC4.54□□□□□ -1.68
TM9SF2Q99805 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.54□□□□□ -1.68
TM9SF2Q99805 RPL23AP50-201ENST00000434149 455 ntBASIC4.54□□□□□ -1.68
TM9SF2Q99805 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.54□□□□□ -1.68
TM9SF2Q99805 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.54□□□□□ -1.68
TM9SF2Q99805 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.54□□□□□ -1.68
TM9SF2Q99805 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.54□□□□□ -1.68
TM9SF2Q99805 MTND5P22-201ENST00000458380 195 ntBASIC4.54□□□□□ -1.68
TM9SF2Q99805 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
TM9SF2Q99805 RNU7-187P-201ENST00000458985 68 ntBASIC4.54□□□□□ -1.68
TM9SF2Q99805 AC018437.1-201ENST00000492214 406 ntBASIC4.54□□□□□ -1.68
TM9SF2Q99805 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.54□□□□□ -1.68
TM9SF2Q99805 AC021146.2-201ENST00000504736 556 ntBASIC4.54□□□□□ -1.68
TM9SF2Q99805 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.54□□□□□ -1.68
TM9SF2Q99805 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.54□□□□□ -1.68
TM9SF2Q99805 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.54□□□□□ -1.68
TM9SF2Q99805 RPL23AP53-201ENST00000521854 457 ntBASIC4.54□□□□□ -1.68
TM9SF2Q99805 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.54□□□□□ -1.68
TM9SF2Q99805 AC005868.1-201ENST00000536421 331 ntBASIC4.54□□□□□ -1.68
TM9SF2Q99805 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.54□□□□□ -1.68
TM9SF2Q99805 AC084783.1-201ENST00000565846 910 ntBASIC4.54□□□□□ -1.68
TM9SF2Q99805 MIR4700-201ENST00000578311 74 ntBASIC4.54□□□□□ -1.68
TM9SF2Q99805 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.54□□□□□ -1.68
TM9SF2Q99805 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TM9SF2Q99805 AL355810.1-201ENST00000614629 552 ntBASIC4.54□□□□□ -1.68
TM9SF2Q99805 AL078596.1-201ENST00000624856 447 ntBASIC4.54□□□□□ -1.68
TM9SF2Q99805 AL732372.2-225ENST00000642124 456 ntBASIC4.54□□□□□ -1.68
TM9SF2Q99805 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TM9SF2Q99805 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
TM9SF2Q99805 AC005183.1-201ENST00000603687 1979 ntBASIC4.54□□□□□ -1.68
TM9SF2Q99805 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TM9SF2Q99805 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
TM9SF2Q99805 AC107068.1-201ENST00000563286 4218 ntBASIC4.54□□□□□ -1.68
TM9SF2Q99805 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
TM9SF2Q99805 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TM9SF2Q99805 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.53□□□□□ -1.68
TM9SF2Q99805 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
TM9SF2Q99805 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.53□□□□□ -1.68
TM9SF2Q99805 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TM9SF2Q99805 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
TM9SF2Q99805 Y_RNA.33-201ENST00000362591 102 ntBASIC4.53□□□□□ -1.68
TM9SF2Q99805 RN7SKP104-201ENST00000362605 328 ntBASIC4.53□□□□□ -1.68
TM9SF2Q99805 Y_RNA.151-201ENST00000363566 112 ntBASIC4.53□□□□□ -1.68
TM9SF2Q99805 RNA5SP428-201ENST00000365129 132 ntBASIC4.53□□□□□ -1.68
TM9SF2Q99805 RNU6-395P-201ENST00000365662 106 ntBASIC4.53□□□□□ -1.68
TM9SF2Q99805 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
TM9SF2Q99805 RNU6-1279P-201ENST00000383917 103 ntBASIC4.53□□□□□ -1.68
TM9SF2Q99805 Y_RNA.463-201ENST00000384271 102 ntBASIC4.53□□□□□ -1.68
TM9SF2Q99805 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
TM9SF2Q99805 U3.35-201ENST00000408405 208 ntBASIC4.53□□□□□ -1.68
TM9SF2Q99805 MCFD2P1-201ENST00000417812 300 ntBASIC4.53□□□□□ -1.68
TM9SF2Q99805 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.53□□□□□ -1.68
TM9SF2Q99805 USMG5P1-201ENST00000425964 177 ntBASIC4.53□□□□□ -1.68
TM9SF2Q99805 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TM9SF2Q99805 AC007919.1-201ENST00000429380 217 ntBASIC4.53□□□□□ -1.68
TM9SF2Q99805 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.53□□□□□ -1.68
TM9SF2Q99805 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.53□□□□□ -1.68
TM9SF2Q99805 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.53□□□□□ -1.68
TM9SF2Q99805 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC4.53□□□□□ -1.68
TM9SF2Q99805 HMGN2P21-201ENST00000447764 270 ntBASIC4.53□□□□□ -1.68
TM9SF2Q99805 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.53□□□□□ -1.68
TM9SF2Q99805 SNORD5.1-201ENST00000458800 75 ntBASIC4.53□□□□□ -1.68
TM9SF2Q99805 RPS3AP41-201ENST00000462701 778 ntBASIC4.53□□□□□ -1.68
TM9SF2Q99805 AC103987.1-201ENST00000473394 348 ntBASIC4.53□□□□□ -1.68
TM9SF2Q99805 AC022493.1-201ENST00000492984 337 ntBASIC4.53□□□□□ -1.68
TM9SF2Q99805 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.53□□□□□ -1.68
TM9SF2Q99805 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.53□□□□□ -1.68
TM9SF2Q99805 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
TM9SF2Q99805 RNU6-1073P-201ENST00000517182 106 ntBASIC4.53□□□□□ -1.68
TM9SF2Q99805 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.53□□□□□ -1.68
TM9SF2Q99805 HIGD1AP5-201ENST00000529959 259 ntBASIC4.53□□□□□ -1.68
TM9SF2Q99805 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.53□□□□□ -1.68
TM9SF2Q99805 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.53□□□□□ -1.68
TM9SF2Q99805 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.53□□□□□ -1.68
TM9SF2Q99805 AC011494.1-201ENST00000596454 237 ntBASIC4.53□□□□□ -1.68
TM9SF2Q99805 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.53□□□□□ -1.68
TM9SF2Q99805 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.53□□□□□ -1.68
TM9SF2Q99805 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
TM9SF2Q99805 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
TM9SF2Q99805 PNPT1P2-201ENST00000456768 2050 ntBASIC4.53□□□□□ -1.68
TM9SF2Q99805 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.53□□□□□ -1.68
TM9SF2Q99805 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TM9SF2Q99805 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TM9SF2Q99805 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms