Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC2.2□□□□□ -2.06
SCAF11Q99590 Y_RNA.30-201ENST00000362572 97 ntBASIC2.2□□□□□ -2.06
SCAF11Q99590 SNORA6-201ENST00000384033 151 ntBASIC2.2□□□□□ -2.06
SCAF11Q99590 MIR625-201ENST00000385047 85 ntBASIC2.2□□□□□ -2.06
SCAF11Q99590 RPL23AP29-201ENST00000397284 453 ntBASIC2.2□□□□□ -2.06
SCAF11Q99590 MIR1250-201ENST00000408098 113 ntBASIC2.2□□□□□ -2.06
SCAF11Q99590 SRIP3-201ENST00000413200 219 ntBASIC2.2□□□□□ -2.06
SCAF11Q99590 AL513185.2-201ENST00000425543 193 ntBASIC2.2□□□□□ -2.06
SCAF11Q99590 RPL21P66-201ENST00000426566 466 ntBASIC2.2□□□□□ -2.06
SCAF11Q99590 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.2□□□□□ -2.06
SCAF11Q99590 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SCAF11Q99590 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.2□□□□□ -2.06
SCAF11Q99590 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.2□□□□□ -2.06
SCAF11Q99590 AC005730.3-201ENST00000583067 366 ntBASIC2.2□□□□□ -2.06
SCAF11Q99590 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SCAF11Q99590 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.2□□□□□ -2.06
SCAF11Q99590 AC098657.3-201ENST00000620434 263 ntBASIC2.2□□□□□ -2.06
SCAF11Q99590 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SCAF11Q99590 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
SCAF11Q99590 RNU4-51P-201ENST00000364206 140 ntBASIC2.19□□□□□ -2.06
SCAF11Q99590 RNU6-335P-201ENST00000364563 113 ntBASIC2.19□□□□□ -2.06
SCAF11Q99590 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.19□□□□□ -2.06
SCAF11Q99590 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.19□□□□□ -2.06
SCAF11Q99590 LINC01347-201ENST00000417964 355 ntBASIC2.19□□□□□ -2.06
SCAF11Q99590 MTND2P21-201ENST00000436242 1042 ntBASIC2.19□□□□□ -2.06
SCAF11Q99590 snoU109.4-201ENST00000458953 143 ntBASIC2.19□□□□□ -2.06
SCAF11Q99590 AC022493.1-201ENST00000492984 337 ntBASIC2.19□□□□□ -2.06
SCAF11Q99590 AC034222.1-201ENST00000494052 532 ntBASIC2.19□□□□□ -2.06
SCAF11Q99590 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SCAF11Q99590 MTCO1P31-201ENST00000506355 492 ntBASIC2.19□□□□□ -2.06
SCAF11Q99590 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.19□□□□□ -2.06
SCAF11Q99590 AC108157.1-201ENST00000510511 539 ntBASIC2.19□□□□□ -2.06
SCAF11Q99590 AL359273.1-201ENST00000510918 627 ntBASIC2.19□□□□□ -2.06
SCAF11Q99590 SNORA31.13-201ENST00000516624 135 ntBASIC2.19□□□□□ -2.06
SCAF11Q99590 SNORD59.2-201ENST00000516873 68 ntBASIC2.19□□□□□ -2.06
SCAF11Q99590 RNU6-1223P-201ENST00000517124 104 ntBASIC2.19□□□□□ -2.06
SCAF11Q99590 RNU6-711P-201ENST00000517255 106 ntBASIC2.19□□□□□ -2.06
SCAF11Q99590 HAUS1P3-201ENST00000523909 662 ntBASIC2.19□□□□□ -2.06
SCAF11Q99590 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.19□□□□□ -2.06
SCAF11Q99590 AC139103.1-201ENST00000534696 1030 ntBASIC2.19□□□□□ -2.06
SCAF11Q99590 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.19□□□□□ -2.06
SCAF11Q99590 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
SCAF11Q99590 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.19□□□□□ -2.06
SCAF11Q99590 AP001350.1-201ENST00000601906 1524 ntBASIC2.18□□□□□ -2.06
SCAF11Q99590 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
SCAF11Q99590 RNU6-1243P-201ENST00000364028 107 ntBASIC2.18□□□□□ -2.06
SCAF11Q99590 RNU6-1180P-201ENST00000364935 107 ntBASIC2.18□□□□□ -2.06
SCAF11Q99590 RNU6-629P-201ENST00000384061 103 ntBASIC2.18□□□□□ -2.06
SCAF11Q99590 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC2.18□□□□□ -2.06
SCAF11Q99590 MTCYBP24-201ENST00000420387 1106 ntBASIC2.18□□□□□ -2.06
SCAF11Q99590 AC097499.1-201ENST00000444277 208 ntBASIC2.18□□□□□ -2.06
SCAF11Q99590 AC092685.1-201ENST00000447960 1243 ntBASIC2.18□□□□□ -2.06
SCAF11Q99590 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.18□□□□□ -2.06
SCAF11Q99590 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.18□□□□□ -2.06
SCAF11Q99590 RPS29P20-201ENST00000489592 171 ntBASIC2.18□□□□□ -2.06
SCAF11Q99590 AC016065.2-201ENST00000514530 444 ntBASIC2.18□□□□□ -2.06
SCAF11Q99590 RNU6-1073P-201ENST00000517182 106 ntBASIC2.18□□□□□ -2.06
SCAF11Q99590 C1DP5-201ENST00000525775 383 ntBASIC2.18□□□□□ -2.06
SCAF11Q99590 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.18□□□□□ -2.06
SCAF11Q99590 AC109635.4-202ENST00000531666 412 ntBASIC2.18□□□□□ -2.06
SCAF11Q99590 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.18□□□□□ -2.06
SCAF11Q99590 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.18□□□□□ -2.06
SCAF11Q99590 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.18□□□□□ -2.06
SCAF11Q99590 AC018618.2-201ENST00000604770 446 ntBASIC2.18□□□□□ -2.06
SCAF11Q99590 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.18□□□□□ -2.06
SCAF11Q99590 AC068944.2-201ENST00000610373 403 ntBASIC2.18□□□□□ -2.06
SCAF11Q99590 U6.107-201ENST00000637108 79 ntBASIC2.18□□□□□ -2.06
SCAF11Q99590 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.17□□□□□ -2.06
SCAF11Q99590 AL136520.1-201ENST00000600311 1322 ntBASIC2.17□□□□□ -2.06
SCAF11Q99590 SNORA27.3-201ENST00000364937 134 ntBASIC2.17□□□□□ -2.06
SCAF11Q99590 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC2.17□□□□□ -2.06
SCAF11Q99590 SYPL1P1-201ENST00000473622 768 ntBASIC2.17□□□□□ -2.06
SCAF11Q99590 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC2.17□□□□□ -2.06
SCAF11Q99590 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.17□□□□□ -2.06
SCAF11Q99590 RNU6-760P-201ENST00000516078 97 ntBASIC2.17□□□□□ -2.06
SCAF11Q99590 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.17□□□□□ -2.06
SCAF11Q99590 RPL21P5-201ENST00000554662 472 ntBASIC2.17□□□□□ -2.06
SCAF11Q99590 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.17□□□□□ -2.06
SCAF11Q99590 AC011712.1-201ENST00000588959 234 ntBASIC2.17□□□□□ -2.06
SCAF11Q99590 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC2.17□□□□□ -2.06
SCAF11Q99590 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
SCAF11Q99590 MAPK10-266ENST00000641066 6555 ntBASIC2.16□□□□□ -2.06
SCAF11Q99590 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SCAF11Q99590 AL136133.1-201ENST00000413694 376 ntBASIC2.16□□□□□ -2.06
SCAF11Q99590 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.16□□□□□ -2.06
SCAF11Q99590 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.16□□□□□ -2.06
SCAF11Q99590 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SCAF11Q99590 MTCO3P44-201ENST00000510977 541 ntBASIC2.16□□□□□ -2.06
SCAF11Q99590 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SCAF11Q99590 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.16□□□□□ -2.06
SCAF11Q99590 CBX3P2-202ENST00000583365 535 ntBASIC2.16□□□□□ -2.06
SCAF11Q99590 AL391646.1-201ENST00000603860 190 ntBASIC2.16□□□□□ -2.06
SCAF11Q99590 AC011374.2-201ENST00000607135 526 ntBASIC2.16□□□□□ -2.06
SCAF11Q99590 AC079597.1-201ENST00000624306 508 ntBASIC2.16□□□□□ -2.06
SCAF11Q99590 ZNF37BP-203ENST00000452306 1352 ntBASIC2.16□□□□□ -2.06
SCAF11Q99590 MTND4P8-201ENST00000514997 1362 ntBASIC2.16□□□□□ -2.06
SCAF11Q99590 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
SCAF11Q99590 AC016716.1-201ENST00000265882 708 ntBASIC2.15□□□□□ -2.06
SCAF11Q99590 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
SCAF11Q99590 RNU6-1181P-201ENST00000384191 106 ntBASIC2.15□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms