Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.8□□□□□ -1.48
PHOX2BQ99453 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.8□□□□□ -1.48
PHOX2BQ99453 RNU105B-201ENST00000364478 208 ntBASIC5.8□□□□□ -1.48
PHOX2BQ99453 RNU6-166P-201ENST00000384371 107 ntBASIC5.8□□□□□ -1.48
PHOX2BQ99453 RPL23AP17-201ENST00000401064 499 ntBASIC5.8□□□□□ -1.48
PHOX2BQ99453 HSPA8P15-201ENST00000401676 786 ntBASIC5.8□□□□□ -1.48
PHOX2BQ99453 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.8□□□□□ -1.48
PHOX2BQ99453 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC5.8□□□□□ -1.48
PHOX2BQ99453 NDUFB4P7-201ENST00000423198 363 ntBASIC5.8□□□□□ -1.48
PHOX2BQ99453 AC091390.3-201ENST00000426478 338 ntBASIC5.8□□□□□ -1.48
PHOX2BQ99453 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC5.8□□□□□ -1.48
PHOX2BQ99453 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.8□□□□□ -1.48
PHOX2BQ99453 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.8□□□□□ -1.48
PHOX2BQ99453 AL353705.4-201ENST00000449661 238 ntBASIC5.8□□□□□ -1.48
PHOX2BQ99453 AC092798.1-201ENST00000458542 409 ntBASIC5.8□□□□□ -1.48
PHOX2BQ99453 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC5.8□□□□□ -1.48
PHOX2BQ99453 RPL23AP75-201ENST00000491601 451 ntBASIC5.8□□□□□ -1.48
PHOX2BQ99453 AC004980.4-201ENST00000513375 203 ntBASIC5.8□□□□□ -1.48
PHOX2BQ99453 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.8□□□□□ -1.48
PHOX2BQ99453 RNU7-110P-201ENST00000516891 62 ntBASIC5.8□□□□□ -1.48
PHOX2BQ99453 AC022559.1-201ENST00000520905 205 ntBASIC5.8□□□□□ -1.48
PHOX2BQ99453 AP005660.1-201ENST00000522972 293 ntBASIC5.8□□□□□ -1.48
PHOX2BQ99453 IGHV1-14-201ENST00000523391 241 ntBASIC5.8□□□□□ -1.48
PHOX2BQ99453 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.8□□□□□ -1.48
PHOX2BQ99453 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.8□□□□□ -1.48
PHOX2BQ99453 MIR7703-201ENST00000620784 77 ntBASIC5.8□□□□□ -1.48
PHOX2BQ99453 AC132068.1-201ENST00000623805 459 ntBASIC5.8□□□□□ -1.48
PHOX2BQ99453 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PHOX2BQ99453 AC105235.1-201ENST00000623208 1816 ntBASIC5.8□□□□□ -1.48
PHOX2BQ99453 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PHOX2BQ99453 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
PHOX2BQ99453 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PHOX2BQ99453 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
PHOX2BQ99453 AL356489.2-201ENST00000566968 3528 ntBASIC5.79□□□□□ -1.48
PHOX2BQ99453 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PHOX2BQ99453 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.79□□□□□ -1.48
PHOX2BQ99453 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.79□□□□□ -1.48
PHOX2BQ99453 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PHOX2BQ99453 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
PHOX2BQ99453 RN7SKP113-201ENST00000363891 295 ntBASIC5.79□□□□□ -1.48
PHOX2BQ99453 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.79□□□□□ -1.48
PHOX2BQ99453 Z85995.1-201ENST00000415547 335 ntBASIC5.79□□□□□ -1.48
PHOX2BQ99453 RN7SL354P-201ENST00000469282 294 ntBASIC5.79□□□□□ -1.48
PHOX2BQ99453 AL049830.2-201ENST00000480072 201 ntBASIC5.79□□□□□ -1.48
PHOX2BQ99453 AC083795.1-201ENST00000491760 320 ntBASIC5.79□□□□□ -1.48
PHOX2BQ99453 AC108145.1-201ENST00000503770 153 ntBASIC5.79□□□□□ -1.48
PHOX2BQ99453 HMGB3P16-201ENST00000508037 287 ntBASIC5.79□□□□□ -1.48
PHOX2BQ99453 AC074255.1-201ENST00000511259 501 ntBASIC5.79□□□□□ -1.48
PHOX2BQ99453 MAL2-206ENST00000522187 547 ntTSL 4 BASIC5.79□□□□□ -1.48
PHOX2BQ99453 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.79□□□□□ -1.48
PHOX2BQ99453 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC5.79□□□□□ -1.48
PHOX2BQ99453 H3F3AP1-201ENST00000559984 334 ntBASIC5.79□□□□□ -1.48
PHOX2BQ99453 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.79□□□□□ -1.48
PHOX2BQ99453 MIR4423-201ENST00000580922 80 ntBASIC5.79□□□□□ -1.48
PHOX2BQ99453 RNU4ATAC-201ENST00000580972 127 ntBASIC5.79□□□□□ -1.48
PHOX2BQ99453 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.79□□□□□ -1.48
PHOX2BQ99453 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC5.79□□□□□ -1.48
PHOX2BQ99453 RPL23AP88-201ENST00000605759 454 ntBASIC5.79□□□□□ -1.48
PHOX2BQ99453 RNA5SP108-201ENST00000605921 117 ntBASIC5.79□□□□□ -1.48
PHOX2BQ99453 AP001541.1-201ENST00000623322 1904 ntBASIC5.79□□□□□ -1.48
PHOX2BQ99453 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
PHOX2BQ99453 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.79□□□□□ -1.48
PHOX2BQ99453 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.79□□□□□ -1.48
PHOX2BQ99453 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
PHOX2BQ99453 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
PHOX2BQ99453 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.79□□□□□ -1.48
PHOX2BQ99453 DNM1P47-203ENST00000571780 12667 ntBASIC5.79□□□□□ -1.48
PHOX2BQ99453 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
PHOX2BQ99453 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PHOX2BQ99453 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
PHOX2BQ99453 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PHOX2BQ99453 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.78□□□□□ -1.48
PHOX2BQ99453 GTF2IP4-201ENST00000453092 2054 ntBASIC5.78□□□□□ -1.48
PHOX2BQ99453 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
PHOX2BQ99453 RNU6-78P-201ENST00000362897 107 ntBASIC5.78□□□□□ -1.48
PHOX2BQ99453 CRP-203ENST00000368111 512 ntTSL 3 BASIC5.78□□□□□ -1.48
PHOX2BQ99453 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.78□□□□□ -1.48
PHOX2BQ99453 SNORD12B-201ENST00000410433 91 ntBASIC5.78□□□□□ -1.48
PHOX2BQ99453 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC5.78□□□□□ -1.48
PHOX2BQ99453 AC073901.1-201ENST00000462471 408 ntBASIC5.78□□□□□ -1.48
PHOX2BQ99453 AC087477.1-201ENST00000465747 340 ntBASIC5.78□□□□□ -1.48
PHOX2BQ99453 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
PHOX2BQ99453 SNRPCP2-201ENST00000504370 475 ntBASIC5.78□□□□□ -1.48
PHOX2BQ99453 RNU6-346P-201ENST00000516288 111 ntBASIC5.78□□□□□ -1.48
PHOX2BQ99453 RNU6-62P-201ENST00000516526 102 ntBASIC5.78□□□□□ -1.48
PHOX2BQ99453 RNU6-572P-201ENST00000516724 80 ntBASIC5.78□□□□□ -1.48
PHOX2BQ99453 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC5.78□□□□□ -1.48
PHOX2BQ99453 AC027229.1-201ENST00000583887 253 ntBASIC5.78□□□□□ -1.48
PHOX2BQ99453 AC010928.2-201ENST00000588017 287 ntBASIC5.78□□□□□ -1.48
PHOX2BQ99453 BRDTP1-201ENST00000605735 677 ntBASIC5.78□□□□□ -1.48
PHOX2BQ99453 AC099669.2-201ENST00000616549 437 ntBASIC5.78□□□□□ -1.48
PHOX2BQ99453 AC073349.3-201ENST00000617616 186 ntBASIC5.78□□□□□ -1.48
PHOX2BQ99453 MTND1P7-201ENST00000632801 297 ntBASIC5.78□□□□□ -1.48
PHOX2BQ99453 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC5.78□□□□□ -1.48
PHOX2BQ99453 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PHOX2BQ99453 SMG1P4-204ENST00000523028 4131 ntBASIC5.78□□□□□ -1.48
PHOX2BQ99453 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
PHOX2BQ99453 AC093671.1-201ENST00000624981 2929 ntBASIC5.78□□□□□ -1.48
PHOX2BQ99453 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.78□□□□□ -1.48
PHOX2BQ99453 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms