Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 AC007998.1-201ENST00000474156 672 ntBASIC5.47□□□□□ -1.53
CALR3Q96L12 AC078918.1-201ENST00000498515 228 ntBASIC5.47□□□□□ -1.53
CALR3Q96L12 AC007016.1-201ENST00000512110 244 ntBASIC5.47□□□□□ -1.53
CALR3Q96L12 RNA5SP373-201ENST00000517271 95 ntBASIC5.47□□□□□ -1.53
CALR3Q96L12 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.47□□□□□ -1.53
CALR3Q96L12 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.47□□□□□ -1.53
CALR3Q96L12 FKBP1BP1-201ENST00000553366 325 ntBASIC5.47□□□□□ -1.53
CALR3Q96L12 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.47□□□□□ -1.53
CALR3Q96L12 TRAV28-201ENST00000557548 323 ntBASIC5.47□□□□□ -1.53
CALR3Q96L12 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.47□□□□□ -1.53
CALR3Q96L12 FO393422.1-201ENST00000603908 708 ntBASIC5.47□□□□□ -1.53
CALR3Q96L12 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CALR3Q96L12 TLK1P1-201ENST00000456760 2440 ntBASIC5.47□□□□□ -1.53
CALR3Q96L12 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CALR3Q96L12 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.47□□□□□ -1.53
CALR3Q96L12 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
CALR3Q96L12 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CALR3Q96L12 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CALR3Q96L12 U3.3-201ENST00000362986 216 ntBASIC5.46□□□□□ -1.54
CALR3Q96L12 RN7SKP113-201ENST00000363891 295 ntBASIC5.46□□□□□ -1.54
CALR3Q96L12 MIR10A-201ENST00000385043 110 ntBASIC5.46□□□□□ -1.54
CALR3Q96L12 SNORA40C-201ENST00000391285 128 ntBASIC5.46□□□□□ -1.54
CALR3Q96L12 RNU6-1156P-201ENST00000410365 100 ntBASIC5.46□□□□□ -1.54
CALR3Q96L12 Y_RNA.618-201ENST00000410949 107 ntBASIC5.46□□□□□ -1.54
CALR3Q96L12 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC5.46□□□□□ -1.54
CALR3Q96L12 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.46□□□□□ -1.54
CALR3Q96L12 AC064862.4-201ENST00000442180 334 ntBASIC5.46□□□□□ -1.54
CALR3Q96L12 RPL7AP61-201ENST00000443410 636 ntBASIC5.46□□□□□ -1.54
CALR3Q96L12 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC5.46□□□□□ -1.54
CALR3Q96L12 AC009237.8-201ENST00000445492 379 ntBASIC5.46□□□□□ -1.54
CALR3Q96L12 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.46□□□□□ -1.54
CALR3Q96L12 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CALR3Q96L12 U8.21-201ENST00000459536 136 ntBASIC5.46□□□□□ -1.54
CALR3Q96L12 FO393415.2-201ENST00000480085 343 ntBASIC5.46□□□□□ -1.54
CALR3Q96L12 HMGB3P16-201ENST00000508037 287 ntBASIC5.46□□□□□ -1.54
CALR3Q96L12 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CALR3Q96L12 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.46□□□□□ -1.54
CALR3Q96L12 SNORA31.19-201ENST00000517079 126 ntBASIC5.46□□□□□ -1.54
CALR3Q96L12 RNA5SP165-201ENST00000517142 115 ntBASIC5.46□□□□□ -1.54
CALR3Q96L12 AC022616.4-201ENST00000522985 181 ntBASIC5.46□□□□□ -1.54
CALR3Q96L12 AC012339.2-201ENST00000523996 453 ntBASIC5.46□□□□□ -1.54
CALR3Q96L12 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC5.46□□□□□ -1.54
CALR3Q96L12 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.46□□□□□ -1.54
CALR3Q96L12 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC5.46□□□□□ -1.54
CALR3Q96L12 AC053481.4-201ENST00000583164 216 ntBASIC5.46□□□□□ -1.54
CALR3Q96L12 AC009314.1-201ENST00000603871 304 ntBASIC5.46□□□□□ -1.54
CALR3Q96L12 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.46□□□□□ -1.54
CALR3Q96L12 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC5.46□□□□□ -1.54
CALR3Q96L12 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.46□□□□□ -1.54
CALR3Q96L12 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
CALR3Q96L12 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.46□□□□□ -1.54
CALR3Q96L12 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CALR3Q96L12 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CALR3Q96L12 DHX9P1-201ENST00000436565 3076 ntBASIC5.46□□□□□ -1.54
CALR3Q96L12 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CALR3Q96L12 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
CALR3Q96L12 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.46□□□□□ -1.54
CALR3Q96L12 AC066616.2-201ENST00000559334 1481 ntBASIC5.45□□□□□ -1.54
CALR3Q96L12 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
CALR3Q96L12 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
CALR3Q96L12 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
CALR3Q96L12 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
CALR3Q96L12 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CALR3Q96L12 RNA5SP234-201ENST00000363916 119 ntBASIC5.45□□□□□ -1.54
CALR3Q96L12 RNU6-450P-201ENST00000364654 107 ntBASIC5.45□□□□□ -1.54
CALR3Q96L12 RNU6-827P-201ENST00000365553 106 ntBASIC5.45□□□□□ -1.54
CALR3Q96L12 Y_RNA.380-201ENST00000365663 111 ntBASIC5.45□□□□□ -1.54
CALR3Q96L12 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
CALR3Q96L12 MIR34A-201ENST00000385130 110 ntBASIC5.45□□□□□ -1.54
CALR3Q96L12 RNA5SP339-201ENST00000390987 122 ntBASIC5.45□□□□□ -1.54
CALR3Q96L12 U3.32-201ENST00000408116 212 ntBASIC5.45□□□□□ -1.54
CALR3Q96L12 RNU2-68P-201ENST00000410878 191 ntBASIC5.45□□□□□ -1.54
CALR3Q96L12 AC108032.1-201ENST00000416706 207 ntBASIC5.45□□□□□ -1.54
CALR3Q96L12 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC5.45□□□□□ -1.54
CALR3Q96L12 AC108059.2-201ENST00000434626 151 ntBASIC5.45□□□□□ -1.54
CALR3Q96L12 AC004938.1-201ENST00000438468 308 ntBASIC5.45□□□□□ -1.54
CALR3Q96L12 RPL23AP45-201ENST00000476406 468 ntBASIC5.45□□□□□ -1.54
CALR3Q96L12 HMGN2P13-201ENST00000476476 274 ntBASIC5.45□□□□□ -1.54
CALR3Q96L12 AC083982.1-201ENST00000485679 344 ntBASIC5.45□□□□□ -1.54
CALR3Q96L12 RN7SL184P-201ENST00000488308 297 ntBASIC5.45□□□□□ -1.54
CALR3Q96L12 AC139453.3-201ENST00000493276 369 ntBASIC5.45□□□□□ -1.54
CALR3Q96L12 MRPS35P2-201ENST00000508242 191 ntBASIC5.45□□□□□ -1.54
CALR3Q96L12 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.45□□□□□ -1.54
CALR3Q96L12 AC005255.1-201ENST00000593748 216 ntBASIC5.45□□□□□ -1.54
CALR3Q96L12 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.45□□□□□ -1.54
CALR3Q96L12 AC016727.2-201ENST00000603988 621 ntBASIC5.45□□□□□ -1.54
CALR3Q96L12 AC013244.1-201ENST00000604279 193 ntBASIC5.45□□□□□ -1.54
CALR3Q96L12 AC004852.3-201ENST00000614131 326 ntBASIC5.45□□□□□ -1.54
CALR3Q96L12 MIR8080-201ENST00000622224 89 ntBASIC5.45□□□□□ -1.54
CALR3Q96L12 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.45□□□□□ -1.54
CALR3Q96L12 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.45□□□□□ -1.54
CALR3Q96L12 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.45□□□□□ -1.54
CALR3Q96L12 AC008669.1-201ENST00000565823 2178 ntBASIC5.45□□□□□ -1.54
CALR3Q96L12 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.45□□□□□ -1.54
CALR3Q96L12 AC007785.2-201ENST00000598627 1916 ntBASIC5.44□□□□□ -1.54
CALR3Q96L12 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CALR3Q96L12 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CALR3Q96L12 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
CALR3Q96L12 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CALR3Q96L12 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms