Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.04□□□□□ -1.76
TRIM43Q96BQ3 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM43Q96BQ3 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
TRIM43Q96BQ3 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM43Q96BQ3 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM43Q96BQ3 RNU1-39P-201ENST00000383897 165 ntBASIC4.04□□□□□ -1.76
TRIM43Q96BQ3 RNU6-641P-201ENST00000384006 107 ntBASIC4.04□□□□□ -1.76
TRIM43Q96BQ3 RNU6-780P-201ENST00000391030 104 ntBASIC4.04□□□□□ -1.76
TRIM43Q96BQ3 AC110754.1-201ENST00000399740 601 ntBASIC4.04□□□□□ -1.76
TRIM43Q96BQ3 RNU2-36P-201ENST00000410361 191 ntBASIC4.04□□□□□ -1.76
TRIM43Q96BQ3 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM43Q96BQ3 OR2AS1P-201ENST00000427827 319 ntBASIC4.04□□□□□ -1.76
TRIM43Q96BQ3 MED13P1-201ENST00000428342 171 ntBASIC4.04□□□□□ -1.76
TRIM43Q96BQ3 RPS20P5-201ENST00000434808 360 ntBASIC4.04□□□□□ -1.76
TRIM43Q96BQ3 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.04□□□□□ -1.76
TRIM43Q96BQ3 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.04□□□□□ -1.76
TRIM43Q96BQ3 FGF7P6-202ENST00000451282 293 ntBASIC4.04□□□□□ -1.76
TRIM43Q96BQ3 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.04□□□□□ -1.76
TRIM43Q96BQ3 AC027673.1-201ENST00000456245 405 ntBASIC4.04□□□□□ -1.76
TRIM43Q96BQ3 MTCO3P38-201ENST00000468910 766 ntBASIC4.04□□□□□ -1.76
TRIM43Q96BQ3 AC025518.1-201ENST00000479856 347 ntBASIC4.04□□□□□ -1.76
TRIM43Q96BQ3 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM43Q96BQ3 Y_RNA.693-201ENST00000516641 110 ntBASIC4.04□□□□□ -1.76
TRIM43Q96BQ3 RNA5SP309-201ENST00000516670 106 ntBASIC4.04□□□□□ -1.76
TRIM43Q96BQ3 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM43Q96BQ3 ERHP1-201ENST00000523006 310 ntBASIC4.04□□□□□ -1.76
TRIM43Q96BQ3 AC008489.1-201ENST00000524271 483 ntBASIC4.04□□□□□ -1.76
TRIM43Q96BQ3 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM43Q96BQ3 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.04□□□□□ -1.76
TRIM43Q96BQ3 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM43Q96BQ3 AL157687.1-201ENST00000554853 619 ntBASIC4.04□□□□□ -1.76
TRIM43Q96BQ3 EIF4BP1-201ENST00000554881 351 ntBASIC4.04□□□□□ -1.76
TRIM43Q96BQ3 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM43Q96BQ3 AC092325.1-201ENST00000566449 554 ntBASIC4.04□□□□□ -1.76
TRIM43Q96BQ3 AC025678.1-201ENST00000567861 338 ntBASIC4.04□□□□□ -1.76
TRIM43Q96BQ3 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM43Q96BQ3 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.04□□□□□ -1.76
TRIM43Q96BQ3 AC006116.10-201ENST00000591836 581 ntBASIC4.04□□□□□ -1.76
TRIM43Q96BQ3 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.04□□□□□ -1.76
TRIM43Q96BQ3 MIR3688-2-201ENST00000636963 87 ntBASIC4.04□□□□□ -1.76
TRIM43Q96BQ3 AL773545.4-201ENST00000637262 310 ntBASIC4.04□□□□□ -1.76
TRIM43Q96BQ3 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.04□□□□□ -1.76
TRIM43Q96BQ3 AL513478.4-201ENST00000641636 310 ntBASIC4.04□□□□□ -1.76
TRIM43Q96BQ3 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.04□□□□□ -1.76
TRIM43Q96BQ3 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM43Q96BQ3 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.04□□□□□ -1.76
TRIM43Q96BQ3 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.04□□□□□ -1.76
TRIM43Q96BQ3 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 GABPAP-201ENST00000419271 1356 ntBASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 Y_RNA.453-201ENST00000384223 109 ntBASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 Y_RNA.573-201ENST00000384763 105 ntBASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 MIR1277-201ENST00000408536 78 ntBASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 RNU2-9P-201ENST00000410194 145 ntBASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 USP9YP27-201ENST00000418455 438 ntBASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 DUTP6-201ENST00000425573 462 ntBASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 MTATP6P4-201ENST00000427725 675 ntBASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 USP12PX-201ENST00000432383 1057 ntBASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 snoU13.4-201ENST00000458916 104 ntBASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 AC092989.1-201ENST00000481235 277 ntBASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 RNA5SP208-201ENST00000516156 78 ntBASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 RNU6-1073P-201ENST00000517182 106 ntBASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 IGKV2-38-201ENST00000517443 247 ntBASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 AC109635.3-201ENST00000529536 185 ntBASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 AP004242.1-201ENST00000533701 349 ntBASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 AC093012.1-202ENST00000549403 582 ntBASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 OR4H12P-201ENST00000556269 907 ntBASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 AC006504.3-201ENST00000586818 523 ntBASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 AC025449.1-201ENST00000603896 529 ntBASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 AP002360.4-201ENST00000606980 481 ntBASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 AP001330.5-201ENST00000607176 411 ntBASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 WT1-AS_8.1-201ENST00000615200 275 ntBASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 AC007014.2-201ENST00000615581 479 ntBASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 AL591424.2-201ENST00000617023 128 ntBASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 AL356321.1-201ENST00000621360 228 ntBASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 AC110801.1-201ENST00000623590 212 ntBASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 AC005609.4-201ENST00000625071 447 ntBASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM43Q96BQ3 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.77
TRIM43Q96BQ3 AC009812.4-201ENST00000569134 1805 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 141.5 ms