Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 SNORD97-201ENST00000459187 142 ntBASIC3.13□□□□□ -1.91
VPS33AQ96AX1 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.13□□□□□ -1.91
VPS33AQ96AX1 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.13□□□□□ -1.91
VPS33AQ96AX1 AC114786.4-201ENST00000508771 728 ntBASIC3.13□□□□□ -1.91
VPS33AQ96AX1 RAC1P5-201ENST00000512182 576 ntBASIC3.13□□□□□ -1.91
VPS33AQ96AX1 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.13□□□□□ -1.91
VPS33AQ96AX1 AC114797.1-201ENST00000514003 728 ntBASIC3.13□□□□□ -1.91
VPS33AQ96AX1 RNU1-95P-201ENST00000516357 160 ntBASIC3.13□□□□□ -1.91
VPS33AQ96AX1 RNU1-128P-201ENST00000516704 160 ntBASIC3.13□□□□□ -1.91
VPS33AQ96AX1 DUXAP2-201ENST00000519198 589 ntBASIC3.13□□□□□ -1.91
VPS33AQ96AX1 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.13□□□□□ -1.91
VPS33AQ96AX1 DUXAP5-201ENST00000529668 529 ntBASIC3.13□□□□□ -1.91
VPS33AQ96AX1 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.13□□□□□ -1.91
VPS33AQ96AX1 AC090888.1-201ENST00000561335 1141 ntBASIC3.13□□□□□ -1.91
VPS33AQ96AX1 MIR5697-201ENST00000578045 78 ntBASIC3.13□□□□□ -1.91
VPS33AQ96AX1 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.13□□□□□ -1.91
VPS33AQ96AX1 DPPA3P3-201ENST00000603842 430 ntBASIC3.13□□□□□ -1.91
VPS33AQ96AX1 AL022161.1-201ENST00000604390 213 ntBASIC3.13□□□□□ -1.91
VPS33AQ96AX1 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.13□□□□□ -1.91
VPS33AQ96AX1 BX664608.1-201ENST00000610519 487 ntBASIC3.13□□□□□ -1.91
VPS33AQ96AX1 AC138749.5-201ENST00000611461 208 ntBASIC3.13□□□□□ -1.91
VPS33AQ96AX1 AC116165.2-201ENST00000616705 206 ntBASIC3.13□□□□□ -1.91
VPS33AQ96AX1 AC092140.2-201ENST00000618027 521 ntBASIC3.13□□□□□ -1.91
VPS33AQ96AX1 FRG1KP-201ENST00000623592 341 ntBASIC3.13□□□□□ -1.91
VPS33AQ96AX1 AC091903.1-201ENST00000624322 454 ntBASIC3.13□□□□□ -1.91
VPS33AQ96AX1 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
VPS33AQ96AX1 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.13□□□□□ -1.91
VPS33AQ96AX1 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
VPS33AQ96AX1 ZNF519P1-201ENST00000449011 1626 ntBASIC3.12□□□□□ -1.91
VPS33AQ96AX1 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
VPS33AQ96AX1 U3.6-201ENST00000363622 211 ntBASIC3.12□□□□□ -1.91
VPS33AQ96AX1 SNORA5A-201ENST00000384111 134 ntBASIC3.12□□□□□ -1.91
VPS33AQ96AX1 Y_RNA.560-201ENST00000384689 102 ntBASIC3.12□□□□□ -1.91
VPS33AQ96AX1 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.12□□□□□ -1.91
VPS33AQ96AX1 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
VPS33AQ96AX1 AL031121.1-201ENST00000406553 254 ntBASIC3.12□□□□□ -1.91
VPS33AQ96AX1 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
VPS33AQ96AX1 RN7SKP111-201ENST00000410349 271 ntBASIC3.12□□□□□ -1.91
VPS33AQ96AX1 RNA5SP229-201ENST00000410809 99 ntBASIC3.12□□□□□ -1.91
VPS33AQ96AX1 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.12□□□□□ -1.91
VPS33AQ96AX1 AC093151.1-201ENST00000427711 313 ntBASIC3.12□□□□□ -1.91
VPS33AQ96AX1 AC073063.1-201ENST00000434352 607 ntBASIC3.12□□□□□ -1.91
VPS33AQ96AX1 SNRPEP9-201ENST00000436794 238 ntBASIC3.12□□□□□ -1.91
VPS33AQ96AX1 MTND1P30-201ENST00000441241 901 ntBASIC3.12□□□□□ -1.91
VPS33AQ96AX1 PDSS1P2-201ENST00000449397 678 ntBASIC3.12□□□□□ -1.91
VPS33AQ96AX1 AC093392.2-201ENST00000450682 337 ntBASIC3.12□□□□□ -1.91
VPS33AQ96AX1 AL590365.1-201ENST00000450788 243 ntBASIC3.12□□□□□ -1.91
VPS33AQ96AX1 RBM43P1-201ENST00000476891 1081 ntBASIC3.12□□□□□ -1.91
VPS33AQ96AX1 AC109486.1-201ENST00000486833 374 ntBASIC3.12□□□□□ -1.91
VPS33AQ96AX1 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.12□□□□□ -1.91
VPS33AQ96AX1 RNU6-759P-201ENST00000516740 103 ntBASIC3.12□□□□□ -1.91
VPS33AQ96AX1 AC107934.1-201ENST00000522215 217 ntBASIC3.12□□□□□ -1.91
VPS33AQ96AX1 SUB1P1-201ENST00000524415 382 ntBASIC3.12□□□□□ -1.91
VPS33AQ96AX1 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.12□□□□□ -1.91
VPS33AQ96AX1 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.12□□□□□ -1.91
VPS33AQ96AX1 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.12□□□□□ -1.91
VPS33AQ96AX1 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.12□□□□□ -1.91
VPS33AQ96AX1 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.12□□□□□ -1.91
VPS33AQ96AX1 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.12□□□□□ -1.91
VPS33AQ96AX1 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.12□□□□□ -1.91
VPS33AQ96AX1 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.12□□□□□ -1.91
VPS33AQ96AX1 RPL23AP78-201ENST00000599928 470 ntBASIC3.12□□□□□ -1.91
VPS33AQ96AX1 AL670379.6-201ENST00000603753 252 ntBASIC3.12□□□□□ -1.91
VPS33AQ96AX1 AL670379.11-201ENST00000604059 253 ntBASIC3.12□□□□□ -1.91
VPS33AQ96AX1 AC008162.1-201ENST00000604718 254 ntBASIC3.12□□□□□ -1.91
VPS33AQ96AX1 AL670379.1-201ENST00000604752 252 ntBASIC3.12□□□□□ -1.91
VPS33AQ96AX1 AL670379.5-201ENST00000605253 252 ntBASIC3.12□□□□□ -1.91
VPS33AQ96AX1 AL670379.12-201ENST00000605291 253 ntBASIC3.12□□□□□ -1.91
VPS33AQ96AX1 AL670379.8-201ENST00000605353 252 ntBASIC3.12□□□□□ -1.91
VPS33AQ96AX1 AC105129.3-201ENST00000605455 485 ntBASIC3.12□□□□□ -1.91
VPS33AQ96AX1 AL670379.7-201ENST00000605823 252 ntBASIC3.12□□□□□ -1.91
VPS33AQ96AX1 AC107294.1-201ENST00000609524 467 ntBASIC3.12□□□□□ -1.91
VPS33AQ96AX1 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.12□□□□□ -1.91
VPS33AQ96AX1 AC009093.8-201ENST00000641769 292 ntBASIC3.12□□□□□ -1.91
VPS33AQ96AX1 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
VPS33AQ96AX1 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.12□□□□□ -1.91
VPS33AQ96AX1 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
VPS33AQ96AX1 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.11□□□□□ -1.91
VPS33AQ96AX1 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
VPS33AQ96AX1 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.11□□□□□ -1.91
VPS33AQ96AX1 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
VPS33AQ96AX1 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.11□□□□□ -1.91
VPS33AQ96AX1 RNU6-511P-201ENST00000363496 107 ntBASIC3.11□□□□□ -1.91
VPS33AQ96AX1 RN7SKP227-201ENST00000364445 330 ntBASIC3.11□□□□□ -1.91
VPS33AQ96AX1 RNA5SP479-201ENST00000364858 117 ntBASIC3.11□□□□□ -1.91
VPS33AQ96AX1 SNORA51.4-201ENST00000364993 124 ntBASIC3.11□□□□□ -1.91
VPS33AQ96AX1 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.11□□□□□ -1.91
VPS33AQ96AX1 MTCYBP36-201ENST00000404146 440 ntBASIC3.11□□□□□ -1.91
VPS33AQ96AX1 RPL5P18-201ENST00000406671 891 ntBASIC3.11□□□□□ -1.91
VPS33AQ96AX1 RAB9AP3-201ENST00000412737 573 ntBASIC3.11□□□□□ -1.91
VPS33AQ96AX1 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.11□□□□□ -1.91
VPS33AQ96AX1 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.11□□□□□ -1.91
VPS33AQ96AX1 BTF3L4P3-201ENST00000418879 476 ntBASIC3.11□□□□□ -1.91
VPS33AQ96AX1 RAC1P6-201ENST00000423911 575 ntBASIC3.11□□□□□ -1.91
VPS33AQ96AX1 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.11□□□□□ -1.91
VPS33AQ96AX1 AC019097.1-201ENST00000424783 735 ntBASIC3.11□□□□□ -1.91
VPS33AQ96AX1 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.11□□□□□ -1.91
VPS33AQ96AX1 HMGB1P27-201ENST00000431429 603 ntBASIC3.11□□□□□ -1.91
VPS33AQ96AX1 AC010153.1-201ENST00000432862 727 ntBASIC3.11□□□□□ -1.91
VPS33AQ96AX1 AC091390.1-201ENST00000433904 331 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms