Protein–RNA interactions for Protein: Q96A33

CCDC47, Coiled-coil domain-containing protein 47, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47Q96A33 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC47Q96A33 RSL24D1P3-201ENST00000449255 495 ntBASIC3.05□□□□□ -1.92
CCDC47Q96A33 MRPS17P3-201ENST00000465453 385 ntBASIC3.05□□□□□ -1.92
CCDC47Q96A33 RN7SL297P-201ENST00000483161 293 ntBASIC3.05□□□□□ -1.92
CCDC47Q96A33 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC47Q96A33 AC114786.4-201ENST00000508771 728 ntBASIC3.05□□□□□ -1.92
CCDC47Q96A33 AC114797.1-201ENST00000514003 728 ntBASIC3.05□□□□□ -1.92
CCDC47Q96A33 AC109329.2-201ENST00000519658 482 ntBASIC3.05□□□□□ -1.92
CCDC47Q96A33 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC47Q96A33 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.05□□□□□ -1.92
CCDC47Q96A33 ELOCP31-201ENST00000540463 467 ntBASIC3.05□□□□□ -1.92
CCDC47Q96A33 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.05□□□□□ -1.92
CCDC47Q96A33 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.05□□□□□ -1.92
CCDC47Q96A33 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC47Q96A33 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC47Q96A33 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC47Q96A33 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC47Q96A33 MIR3117-201ENST00000584034 78 ntBASIC3.05□□□□□ -1.92
CCDC47Q96A33 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
CCDC47Q96A33 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC47Q96A33 MTND4LP5-201ENST00000605152 292 ntBASIC3.05□□□□□ -1.92
CCDC47Q96A33 AC093732.2-201ENST00000607950 274 ntBASIC3.05□□□□□ -1.92
CCDC47Q96A33 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC47Q96A33 CR381653.2-201ENST00000624041 768 ntBASIC3.05□□□□□ -1.92
CCDC47Q96A33 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC47Q96A33 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC47Q96A33 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.04□□□□□ -1.92
CCDC47Q96A33 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC47Q96A33 CCT4P2-201ENST00000233836 1548 ntBASIC3.04□□□□□ -1.92
CCDC47Q96A33 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC47Q96A33 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.04□□□□□ -1.92
CCDC47Q96A33 RNA5SP393-201ENST00000363423 117 ntBASIC3.04□□□□□ -1.92
CCDC47Q96A33 RNU6-853P-201ENST00000364306 107 ntBASIC3.04□□□□□ -1.92
CCDC47Q96A33 MIR592-201ENST00000384959 97 ntBASIC3.04□□□□□ -1.92
CCDC47Q96A33 RNU6-1176P-201ENST00000390955 107 ntBASIC3.04□□□□□ -1.92
CCDC47Q96A33 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.04□□□□□ -1.92
CCDC47Q96A33 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC47Q96A33 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC47Q96A33 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.04□□□□□ -1.92
CCDC47Q96A33 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC47Q96A33 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC47Q96A33 NANOGNBP1-201ENST00000448444 480 ntBASIC3.04□□□□□ -1.92
CCDC47Q96A33 RPL12P25-201ENST00000455592 494 ntBASIC3.04□□□□□ -1.92
CCDC47Q96A33 snoU13.22-201ENST00000459428 104 ntBASIC3.04□□□□□ -1.92
CCDC47Q96A33 RPS15AP36-201ENST00000492022 382 ntBASIC3.04□□□□□ -1.92
CCDC47Q96A33 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.04□□□□□ -1.92
CCDC47Q96A33 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC47Q96A33 SNORA74D-201ENST00000516404 141 ntBASIC3.04□□□□□ -1.92
CCDC47Q96A33 ATP5F1P5-201ENST00000526403 760 ntBASIC3.04□□□□□ -1.92
CCDC47Q96A33 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC47Q96A33 AC025281.1-201ENST00000567026 265 ntBASIC3.04□□□□□ -1.92
CCDC47Q96A33 MIR4446-201ENST00000578505 67 ntBASIC3.04□□□□□ -1.92
CCDC47Q96A33 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC47Q96A33 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.04□□□□□ -1.92
CCDC47Q96A33 AC136601.2-201ENST00000604356 474 ntBASIC3.04□□□□□ -1.92
CCDC47Q96A33 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.04□□□□□ -1.92
CCDC47Q96A33 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC47Q96A33 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC47Q96A33 FTX_3.1-201ENST00000610451 147 ntBASIC3.04□□□□□ -1.92
CCDC47Q96A33 AL133445.2-201ENST00000611191 527 ntBASIC3.04□□□□□ -1.92
CCDC47Q96A33 AC008498.1-201ENST00000613012 531 ntBASIC3.04□□□□□ -1.92
CCDC47Q96A33 AL392048.1-201ENST00000613946 534 ntBASIC3.04□□□□□ -1.92
CCDC47Q96A33 SNHG22-203ENST00000617833 660 ntBASIC3.04□□□□□ -1.92
CCDC47Q96A33 AC006386.1-201ENST00000619436 415 ntBASIC3.04□□□□□ -1.92
CCDC47Q96A33 AC079228.1-201ENST00000624774 1049 ntBASIC3.04□□□□□ -1.92
CCDC47Q96A33 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC47Q96A33 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
CCDC47Q96A33 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
CCDC47Q96A33 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.03□□□□□ -1.92
CCDC47Q96A33 MTND4P9-201ENST00000507819 1346 ntBASIC3.03□□□□□ -1.92
CCDC47Q96A33 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC47Q96A33 AC009902.3-201ENST00000606235 2172 ntBASIC3.03□□□□□ -1.92
CCDC47Q96A33 RNU4-68P-201ENST00000364314 141 ntBASIC3.03□□□□□ -1.92
CCDC47Q96A33 RN7SKP226-201ENST00000364912 300 ntBASIC3.03□□□□□ -1.92
CCDC47Q96A33 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC47Q96A33 UBA52P6-201ENST00000399822 382 ntBASIC3.03□□□□□ -1.92
CCDC47Q96A33 AL139132.1-201ENST00000431587 344 ntBASIC3.03□□□□□ -1.92
CCDC47Q96A33 AC087499.2-201ENST00000432861 149 ntBASIC3.03□□□□□ -1.92
CCDC47Q96A33 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.03□□□□□ -1.92
CCDC47Q96A33 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC47Q96A33 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC47Q96A33 AC093156.1-201ENST00000440382 670 ntBASIC3.03□□□□□ -1.92
CCDC47Q96A33 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.03□□□□□ -1.92
CCDC47Q96A33 TPT1P14-201ENST00000448018 505 ntBASIC3.03□□□□□ -1.92
CCDC47Q96A33 DPPA3P1-201ENST00000448050 469 ntBASIC3.03□□□□□ -1.92
CCDC47Q96A33 AL031313.1-201ENST00000448435 256 ntBASIC3.03□□□□□ -1.92
CCDC47Q96A33 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC47Q96A33 RPS29P26-201ENST00000477483 171 ntBASIC3.03□□□□□ -1.92
CCDC47Q96A33 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC47Q96A33 AC010587.2-201ENST00000511727 448 ntBASIC3.03□□□□□ -1.92
CCDC47Q96A33 AC022634.1-201ENST00000520765 532 ntBASIC3.03□□□□□ -1.92
CCDC47Q96A33 AC004486.1-201ENST00000546846 233 ntBASIC3.03□□□□□ -1.92
CCDC47Q96A33 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC47Q96A33 AC060771.1-201ENST00000582031 164 ntBASIC3.03□□□□□ -1.92
CCDC47Q96A33 MIR5194-201ENST00000582634 120 ntBASIC3.03□□□□□ -1.92
CCDC47Q96A33 AL160237.3-201ENST00000604114 1013 ntBASIC3.03□□□□□ -1.92
CCDC47Q96A33 AP000787.2-201ENST00000604432 568 ntBASIC3.03□□□□□ -1.92
CCDC47Q96A33 AL161756.2-201ENST00000604597 246 ntBASIC3.03□□□□□ -1.92
CCDC47Q96A33 AC012468.1-201ENST00000604888 430 ntBASIC3.03□□□□□ -1.92
CCDC47Q96A33 AL442067.2-201ENST00000614033 363 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms