Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 AC063943.3-201ENST00000615562 356 ntBASIC3.41□□□□□ -1.86
NPIPB3Q92617 AC090617.10-201ENST00000624308 134 ntBASIC3.41□□□□□ -1.86
NPIPB3Q92617 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NPIPB3Q92617 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NPIPB3Q92617 AC022336.2-201ENST00000568966 2538 ntBASIC3.41□□□□□ -1.86
NPIPB3Q92617 AC002546.1-201ENST00000588041 2504 ntBASIC3.41□□□□□ -1.86
NPIPB3Q92617 CUL1P1-201ENST00000509510 2425 ntBASIC3.41□□□□□ -1.86
NPIPB3Q92617 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NPIPB3Q92617 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
NPIPB3Q92617 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
NPIPB3Q92617 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
NPIPB3Q92617 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
NPIPB3Q92617 CBX3P1-201ENST00000325243 554 ntBASIC3.4□□□□□ -1.87
NPIPB3Q92617 RNA5SP388-201ENST00000362584 119 ntBASIC3.4□□□□□ -1.87
NPIPB3Q92617 RNU6-522P-201ENST00000364497 107 ntBASIC3.4□□□□□ -1.87
NPIPB3Q92617 RNA5SP513-201ENST00000364648 118 ntBASIC3.4□□□□□ -1.87
NPIPB3Q92617 SNORA4.3-201ENST00000365564 137 ntBASIC3.4□□□□□ -1.87
NPIPB3Q92617 RHOT1P2-201ENST00000366423 333 ntBASIC3.4□□□□□ -1.87
NPIPB3Q92617 Y_RNA.399-201ENST00000383955 105 ntBASIC3.4□□□□□ -1.87
NPIPB3Q92617 MIR325-201ENST00000385260 98 ntBASIC3.4□□□□□ -1.87
NPIPB3Q92617 SNORD70.1-201ENST00000391007 85 ntBASIC3.4□□□□□ -1.87
NPIPB3Q92617 AC092642.1-201ENST00000392417 425 ntBASIC3.4□□□□□ -1.87
NPIPB3Q92617 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NPIPB3Q92617 FAT1P1-201ENST00000406588 507 ntBASIC3.4□□□□□ -1.87
NPIPB3Q92617 AL591034.1-201ENST00000407447 340 ntBASIC3.4□□□□□ -1.87
NPIPB3Q92617 Y_RNA.615-201ENST00000410769 117 ntBASIC3.4□□□□□ -1.87
NPIPB3Q92617 RN7SKP53-201ENST00000411337 315 ntBASIC3.4□□□□□ -1.87
NPIPB3Q92617 AC063979.1-201ENST00000415539 377 ntBASIC3.4□□□□□ -1.87
NPIPB3Q92617 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.4□□□□□ -1.87
NPIPB3Q92617 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.4□□□□□ -1.87
NPIPB3Q92617 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.4□□□□□ -1.87
NPIPB3Q92617 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.4□□□□□ -1.87
NPIPB3Q92617 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.4□□□□□ -1.87
NPIPB3Q92617 AL590639.1-201ENST00000456484 337 ntBASIC3.4□□□□□ -1.87
NPIPB3Q92617 RPL21P41-201ENST00000459863 264 ntBASIC3.4□□□□□ -1.87
NPIPB3Q92617 AC010326.1-201ENST00000462726 602 ntBASIC3.4□□□□□ -1.87
NPIPB3Q92617 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.4□□□□□ -1.87
NPIPB3Q92617 SUMO2P6-201ENST00000505273 288 ntBASIC3.4□□□□□ -1.87
NPIPB3Q92617 HMGB3P15-201ENST00000507326 574 ntBASIC3.4□□□□□ -1.87
NPIPB3Q92617 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.4□□□□□ -1.87
NPIPB3Q92617 CASP1P1-201ENST00000526345 212 ntBASIC3.4□□□□□ -1.87
NPIPB3Q92617 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.4□□□□□ -1.87
NPIPB3Q92617 AP000827.1-201ENST00000527814 258 ntBASIC3.4□□□□□ -1.87
NPIPB3Q92617 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
NPIPB3Q92617 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.4□□□□□ -1.87
NPIPB3Q92617 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.4□□□□□ -1.87
NPIPB3Q92617 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.4□□□□□ -1.87
NPIPB3Q92617 AC044860.2-201ENST00000561005 179 ntBASIC3.4□□□□□ -1.87
NPIPB3Q92617 MIR1273C-201ENST00000578669 77 ntBASIC3.4□□□□□ -1.87
NPIPB3Q92617 MIR548AC-201ENST00000585049 88 ntBASIC3.4□□□□□ -1.87
NPIPB3Q92617 UBE2V2P2-201ENST00000587677 504 ntBASIC3.4□□□□□ -1.87
NPIPB3Q92617 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC3.4□□□□□ -1.87
NPIPB3Q92617 AC079587.1-201ENST00000603846 277 ntBASIC3.4□□□□□ -1.87
NPIPB3Q92617 U2.17-201ENST00000611454 95 ntBASIC3.4□□□□□ -1.87
NPIPB3Q92617 uc_338.32-201ENST00000615087 172 ntBASIC3.4□□□□□ -1.87
NPIPB3Q92617 MIR7155-201ENST00000615925 56 ntBASIC3.4□□□□□ -1.87
NPIPB3Q92617 AC018445.2-201ENST00000622987 260 ntBASIC3.4□□□□□ -1.87
NPIPB3Q92617 AP003400.5-201ENST00000624827 617 ntBASIC3.4□□□□□ -1.87
NPIPB3Q92617 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.4□□□□□ -1.87
NPIPB3Q92617 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
NPIPB3Q92617 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.4□□□□□ -1.87
NPIPB3Q92617 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.4□□□□□ -1.87
NPIPB3Q92617 FAM35BP-202ENST00000497389 3337 ntBASIC3.4□□□□□ -1.87
NPIPB3Q92617 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.4□□□□□ -1.87
NPIPB3Q92617 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.4□□□□□ -1.87
NPIPB3Q92617 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
NPIPB3Q92617 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
NPIPB3Q92617 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.39□□□□□ -1.87
NPIPB3Q92617 MTND4P12-201ENST00000498999 1377 ntBASIC3.39□□□□□ -1.87
NPIPB3Q92617 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NPIPB3Q92617 AP001486.2-201ENST00000561652 5113 ntBASIC3.39□□□□□ -1.87
NPIPB3Q92617 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NPIPB3Q92617 ZNF807-201ENST00000328088 1707 ntBASIC3.39□□□□□ -1.87
NPIPB3Q92617 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.39□□□□□ -1.87
NPIPB3Q92617 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
NPIPB3Q92617 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.39□□□□□ -1.87
NPIPB3Q92617 RNA5SP175-201ENST00000364275 119 ntBASIC3.39□□□□□ -1.87
NPIPB3Q92617 Y_RNA.378-201ENST00000365652 113 ntBASIC3.39□□□□□ -1.87
NPIPB3Q92617 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
NPIPB3Q92617 RNU6-767P-201ENST00000384132 107 ntBASIC3.39□□□□□ -1.87
NPIPB3Q92617 MIR93-201ENST00000385024 80 ntBASIC3.39□□□□□ -1.87
NPIPB3Q92617 RPS4XP9-201ENST00000405151 780 ntBASIC3.39□□□□□ -1.87
NPIPB3Q92617 POLHP1-201ENST00000411806 470 ntBASIC3.39□□□□□ -1.87
NPIPB3Q92617 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.39□□□□□ -1.87
NPIPB3Q92617 RPL7AP25-201ENST00000423357 805 ntBASIC3.39□□□□□ -1.87
NPIPB3Q92617 AC092047.1-201ENST00000424997 240 ntBASIC3.39□□□□□ -1.87
NPIPB3Q92617 AL669831.1-202ENST00000428504 417 ntBASIC3.39□□□□□ -1.87
NPIPB3Q92617 GTF2IP13-201ENST00000438487 386 ntBASIC3.39□□□□□ -1.87
NPIPB3Q92617 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.39□□□□□ -1.87
NPIPB3Q92617 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.39□□□□□ -1.87
NPIPB3Q92617 AC008628.2-201ENST00000502605 298 ntBASIC3.39□□□□□ -1.87
NPIPB3Q92617 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.39□□□□□ -1.87
NPIPB3Q92617 AC108475.1-201ENST00000507880 950 ntBASIC3.39□□□□□ -1.87
NPIPB3Q92617 AC017037.1-201ENST00000508460 471 ntBASIC3.39□□□□□ -1.87
NPIPB3Q92617 AC046134.1-201ENST00000514454 666 ntBASIC3.39□□□□□ -1.87
NPIPB3Q92617 RNU6-1038P-201ENST00000516516 104 ntBASIC3.39□□□□□ -1.87
NPIPB3Q92617 RNU6-1314P-201ENST00000517139 104 ntBASIC3.39□□□□□ -1.87
NPIPB3Q92617 IGKV1-32-201ENST00000519290 311 ntBASIC3.39□□□□□ -1.87
NPIPB3Q92617 RPL7P20-201ENST00000520308 745 ntBASIC3.39□□□□□ -1.87
NPIPB3Q92617 AP003122.3-201ENST00000526316 255 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms