Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
SNED1Q8TER0 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.41□□□□□ -1.86
SNED1Q8TER0 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
SNED1Q8TER0 RNU6-374P-201ENST00000364146 108 ntBASIC3.41□□□□□ -1.86
SNED1Q8TER0 Y_RNA.302-201ENST00000364997 102 ntBASIC3.41□□□□□ -1.86
SNED1Q8TER0 Y_RNA.303-201ENST00000364998 94 ntBASIC3.41□□□□□ -1.86
SNED1Q8TER0 RNU6-348P-201ENST00000384386 107 ntBASIC3.41□□□□□ -1.86
SNED1Q8TER0 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
SNED1Q8TER0 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.41□□□□□ -1.86
SNED1Q8TER0 MTND3P23-201ENST00000431980 347 ntBASIC3.41□□□□□ -1.86
SNED1Q8TER0 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.41□□□□□ -1.86
SNED1Q8TER0 MTND1P28-201ENST00000435623 950 ntBASIC3.41□□□□□ -1.86
SNED1Q8TER0 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.41□□□□□ -1.86
SNED1Q8TER0 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.41□□□□□ -1.86
SNED1Q8TER0 COX6CP18-201ENST00000448769 222 ntBASIC3.41□□□□□ -1.86
SNED1Q8TER0 PAXBP1P1-201ENST00000449315 447 ntBASIC3.41□□□□□ -1.86
SNED1Q8TER0 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.41□□□□□ -1.86
SNED1Q8TER0 AP000893.1-201ENST00000474462 794 ntBASIC3.41□□□□□ -1.86
SNED1Q8TER0 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SNED1Q8TER0 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SNED1Q8TER0 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SNED1Q8TER0 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.41□□□□□ -1.86
SNED1Q8TER0 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.41□□□□□ -1.86
SNED1Q8TER0 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SNED1Q8TER0 RNA5SP24-201ENST00000516478 95 ntBASIC3.41□□□□□ -1.86
SNED1Q8TER0 RNU6-528P-201ENST00000516926 100 ntBASIC3.41□□□□□ -1.86
SNED1Q8TER0 IGJP1-201ENST00000522682 475 ntBASIC3.41□□□□□ -1.86
SNED1Q8TER0 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.41□□□□□ -1.86
SNED1Q8TER0 OR5D17P-201ENST00000531492 978 ntBASIC3.41□□□□□ -1.86
SNED1Q8TER0 AC118273.2-201ENST00000532092 465 ntBASIC3.41□□□□□ -1.86
SNED1Q8TER0 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.41□□□□□ -1.86
SNED1Q8TER0 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.41□□□□□ -1.86
SNED1Q8TER0 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.41□□□□□ -1.86
SNED1Q8TER0 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.41□□□□□ -1.86
SNED1Q8TER0 AL009028.1-201ENST00000604895 802 ntBASIC3.41□□□□□ -1.86
SNED1Q8TER0 AC091965.4-201ENST00000607691 587 ntBASIC3.41□□□□□ -1.86
SNED1Q8TER0 AC004067.1-201ENST00000608733 700 ntBASIC3.41□□□□□ -1.86
SNED1Q8TER0 AC006566.1-201ENST00000608943 513 ntBASIC3.41□□□□□ -1.86
SNED1Q8TER0 AC012531.5-201ENST00000611375 151 ntBASIC3.41□□□□□ -1.86
SNED1Q8TER0 AC072046.2-201ENST00000618366 268 ntBASIC3.41□□□□□ -1.86
SNED1Q8TER0 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SNED1Q8TER0 AL356596.1-201ENST00000624230 379 ntBASIC3.41□□□□□ -1.86
SNED1Q8TER0 AC048347.1-201ENST00000624621 427 ntBASIC3.41□□□□□ -1.86
SNED1Q8TER0 OR5H6-203ENST00000642105 978 ntBASIC3.41□□□□□ -1.86
SNED1Q8TER0 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SNED1Q8TER0 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SNED1Q8TER0 PABPC1P9-201ENST00000426076 1612 ntBASIC3.4□□□□□ -1.86
SNED1Q8TER0 MTCO1P23-201ENST00000415223 1526 ntBASIC3.4□□□□□ -1.86
SNED1Q8TER0 ELF2P3-201ENST00000445099 1506 ntBASIC3.4□□□□□ -1.86
SNED1Q8TER0 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SNED1Q8TER0 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SNED1Q8TER0 GABPAP-201ENST00000419271 1356 ntBASIC3.4□□□□□ -1.86
SNED1Q8TER0 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
SNED1Q8TER0 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SNED1Q8TER0 RNU6-805P-201ENST00000365643 106 ntBASIC3.4□□□□□ -1.87
SNED1Q8TER0 Y_RNA.554-201ENST00000384672 102 ntBASIC3.4□□□□□ -1.87
SNED1Q8TER0 MIR196B-201ENST00000384852 84 ntBASIC3.4□□□□□ -1.87
SNED1Q8TER0 HSPE1P26-201ENST00000405341 275 ntBASIC3.4□□□□□ -1.87
SNED1Q8TER0 SNORA3.2-201ENST00000408221 125 ntBASIC3.4□□□□□ -1.87
SNED1Q8TER0 USP9YP18-201ENST00000425912 695 ntBASIC3.4□□□□□ -1.87
SNED1Q8TER0 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.4□□□□□ -1.87
SNED1Q8TER0 AC098614.3-201ENST00000438957 440 ntBASIC3.4□□□□□ -1.87
SNED1Q8TER0 AC004865.1-201ENST00000442276 1003 ntBASIC3.4□□□□□ -1.87
SNED1Q8TER0 RPS26P56-201ENST00000444468 240 ntBASIC3.4□□□□□ -1.87
SNED1Q8TER0 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.4□□□□□ -1.87
SNED1Q8TER0 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SNED1Q8TER0 RN7SL633P-201ENST00000488974 297 ntBASIC3.4□□□□□ -1.87
SNED1Q8TER0 AC106872.2-201ENST00000494303 480 ntBASIC3.4□□□□□ -1.87
SNED1Q8TER0 AC093278.1-201ENST00000494700 600 ntBASIC3.4□□□□□ -1.87
SNED1Q8TER0 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.4□□□□□ -1.87
SNED1Q8TER0 RN7SKP31-201ENST00000516354 278 ntBASIC3.4□□□□□ -1.87
SNED1Q8TER0 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.4□□□□□ -1.87
SNED1Q8TER0 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.4□□□□□ -1.87
SNED1Q8TER0 PCMTD1P2-201ENST00000565017 355 ntBASIC3.4□□□□□ -1.87
SNED1Q8TER0 AC012065.4-201ENST00000602445 679 ntBASIC3.4□□□□□ -1.87
SNED1Q8TER0 AC104985.2-201ENST00000620598 500 ntBASIC3.4□□□□□ -1.87
SNED1Q8TER0 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.4□□□□□ -1.87
SNED1Q8TER0 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SNED1Q8TER0 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.4□□□□□ -1.87
SNED1Q8TER0 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.4□□□□□ -1.87
SNED1Q8TER0 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SNED1Q8TER0 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.39□□□□□ -1.87
SNED1Q8TER0 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
SNED1Q8TER0 RNU5A-6P-201ENST00000384136 116 ntBASIC3.39□□□□□ -1.87
SNED1Q8TER0 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.39□□□□□ -1.87
SNED1Q8TER0 AL009174.1-201ENST00000426577 416 ntBASIC3.39□□□□□ -1.87
SNED1Q8TER0 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.39□□□□□ -1.87
SNED1Q8TER0 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.39□□□□□ -1.87
SNED1Q8TER0 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.39□□□□□ -1.87
SNED1Q8TER0 SNRPEP8-201ENST00000442866 260 ntBASIC3.39□□□□□ -1.87
SNED1Q8TER0 RPL23AP15-201ENST00000450202 459 ntBASIC3.39□□□□□ -1.87
SNED1Q8TER0 AC003071.1-201ENST00000451219 789 ntBASIC3.39□□□□□ -1.87
SNED1Q8TER0 RN7SL75P-201ENST00000461926 281 ntBASIC3.39□□□□□ -1.87
SNED1Q8TER0 RPL30P9-201ENST00000465586 330 ntBASIC3.39□□□□□ -1.87
SNED1Q8TER0 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.39□□□□□ -1.87
SNED1Q8TER0 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.39□□□□□ -1.87
SNED1Q8TER0 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SNED1Q8TER0 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.39□□□□□ -1.87
SNED1Q8TER0 AC074344.1-201ENST00000512823 224 ntBASIC3.39□□□□□ -1.87
SNED1Q8TER0 RNU6-488P-201ENST00000515918 99 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms