Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.8□□□□□ -1.8
VPS52Q8N1B4 OR4K8P-201ENST00000578842 1048 ntBASIC3.8□□□□□ -1.8
VPS52Q8N1B4 MIR3690-201ENST00000580266 75 ntBASIC3.8□□□□□ -1.8
VPS52Q8N1B4 KC877982.1-201ENST00000602313 470 ntBASIC3.8□□□□□ -1.8
VPS52Q8N1B4 AC245014.2-201ENST00000603689 287 ntBASIC3.8□□□□□ -1.8
VPS52Q8N1B4 AC246785.4-201ENST00000605374 287 ntBASIC3.8□□□□□ -1.8
VPS52Q8N1B4 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.8□□□□□ -1.8
VPS52Q8N1B4 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.8□□□□□ -1.8
VPS52Q8N1B4 AC004908.2-201ENST00000609090 574 ntBASIC3.8□□□□□ -1.8
VPS52Q8N1B4 AL732618.1-201ENST00000623251 301 ntBASIC3.8□□□□□ -1.8
VPS52Q8N1B4 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.8□□□□□ -1.8
VPS52Q8N1B4 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VPS52Q8N1B4 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.8□□□□□ -1.8
VPS52Q8N1B4 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VPS52Q8N1B4 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.79□□□□□ -1.8
VPS52Q8N1B4 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VPS52Q8N1B4 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
VPS52Q8N1B4 Y_RNA.6-201ENST00000362350 114 ntBASIC3.79□□□□□ -1.8
VPS52Q8N1B4 SNORA38.1-201ENST00000364172 131 ntBASIC3.79□□□□□ -1.8
VPS52Q8N1B4 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.79□□□□□ -1.8
VPS52Q8N1B4 RNU6-637P-201ENST00000384050 107 ntBASIC3.79□□□□□ -1.8
VPS52Q8N1B4 SNORA48.2-201ENST00000390926 124 ntBASIC3.79□□□□□ -1.8
VPS52Q8N1B4 SNORD17-201ENST00000390930 237 ntBASIC3.79□□□□□ -1.8
VPS52Q8N1B4 RPS3AP36-201ENST00000398190 775 ntBASIC3.79□□□□□ -1.8
VPS52Q8N1B4 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
VPS52Q8N1B4 RN7SKP285-201ENST00000410137 318 ntBASIC3.79□□□□□ -1.8
VPS52Q8N1B4 RNU6-195P-201ENST00000411352 109 ntBASIC3.79□□□□□ -1.8
VPS52Q8N1B4 RAD23BP2-201ENST00000416003 1207 ntBASIC3.79□□□□□ -1.8
VPS52Q8N1B4 USP9YP36-201ENST00000424581 829 ntBASIC3.79□□□□□ -1.8
VPS52Q8N1B4 MTCO3P30-201ENST00000426425 670 ntBASIC3.79□□□□□ -1.8
VPS52Q8N1B4 C8orf59P1-201ENST00000429930 303 ntBASIC3.79□□□□□ -1.8
VPS52Q8N1B4 OR4K11P-201ENST00000431829 904 ntBASIC3.79□□□□□ -1.8
VPS52Q8N1B4 AC104850.1-201ENST00000435940 476 ntBASIC3.79□□□□□ -1.8
VPS52Q8N1B4 USP9YP15-201ENST00000442391 422 ntBASIC3.79□□□□□ -1.8
VPS52Q8N1B4 AC079448.1-201ENST00000449377 373 ntBASIC3.79□□□□□ -1.8
VPS52Q8N1B4 AC115115.1-201ENST00000449927 248 ntBASIC3.79□□□□□ -1.8
VPS52Q8N1B4 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.79□□□□□ -1.8
VPS52Q8N1B4 U3.44-201ENST00000458938 192 ntBASIC3.79□□□□□ -1.8
VPS52Q8N1B4 RBM43P1-201ENST00000476891 1081 ntBASIC3.79□□□□□ -1.8
VPS52Q8N1B4 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.79□□□□□ -1.8
VPS52Q8N1B4 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
VPS52Q8N1B4 AC010587.1-201ENST00000505809 469 ntBASIC3.79□□□□□ -1.8
VPS52Q8N1B4 AC108078.1-201ENST00000508073 725 ntBASIC3.79□□□□□ -1.8
VPS52Q8N1B4 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.79□□□□□ -1.8
VPS52Q8N1B4 AC016957.1-201ENST00000534895 309 ntBASIC3.79□□□□□ -1.8
VPS52Q8N1B4 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.79□□□□□ -1.8
VPS52Q8N1B4 AL391840.1-201ENST00000571144 367 ntBASIC3.79□□□□□ -1.8
VPS52Q8N1B4 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.79□□□□□ -1.8
VPS52Q8N1B4 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
VPS52Q8N1B4 AC007038.2-201ENST00000608095 740 ntBASIC3.79□□□□□ -1.8
VPS52Q8N1B4 AC118273.1-201ENST00000525324 3006 ntBASIC3.79□□□□□ -1.8
VPS52Q8N1B4 MTCO1P9-201ENST00000505577 1534 ntBASIC3.79□□□□□ -1.8
VPS52Q8N1B4 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VPS52Q8N1B4 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VPS52Q8N1B4 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.78□□□□□ -1.8
VPS52Q8N1B4 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VPS52Q8N1B4 RNY4P16-201ENST00000364768 94 ntBASIC3.78□□□□□ -1.8
VPS52Q8N1B4 RNU6-516P-201ENST00000411381 104 ntBASIC3.78□□□□□ -1.8
VPS52Q8N1B4 HMGN1P24-201ENST00000412282 298 ntBASIC3.78□□□□□ -1.8
VPS52Q8N1B4 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.78□□□□□ -1.8
VPS52Q8N1B4 BX295541.1-201ENST00000417774 250 ntBASIC3.78□□□□□ -1.8
VPS52Q8N1B4 ISCA1P6-201ENST00000427740 390 ntBASIC3.78□□□□□ -1.8
VPS52Q8N1B4 MTND3P21-201ENST00000433774 331 ntBASIC3.78□□□□□ -1.8
VPS52Q8N1B4 NDUFB1P1-201ENST00000435191 180 ntBASIC3.78□□□□□ -1.8
VPS52Q8N1B4 RPL35AP22-201ENST00000436855 335 ntBASIC3.78□□□□□ -1.8
VPS52Q8N1B4 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.78□□□□□ -1.8
VPS52Q8N1B4 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.78□□□□□ -1.8
VPS52Q8N1B4 AC093392.2-201ENST00000450682 337 ntBASIC3.78□□□□□ -1.8
VPS52Q8N1B4 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.78□□□□□ -1.8
VPS52Q8N1B4 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.78□□□□□ -1.8
VPS52Q8N1B4 RNU7-59P-201ENST00000459101 61 ntBASIC3.78□□□□□ -1.8
VPS52Q8N1B4 AC107401.1-201ENST00000503426 685 ntBASIC3.78□□□□□ -1.8
VPS52Q8N1B4 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.78□□□□□ -1.8
VPS52Q8N1B4 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.78□□□□□ -1.8
VPS52Q8N1B4 AC022483.1-201ENST00000514020 567 ntBASIC3.78□□□□□ -1.8
VPS52Q8N1B4 RNU6-798P-201ENST00000516912 103 ntBASIC3.78□□□□□ -1.8
VPS52Q8N1B4 AP000857.1-201ENST00000532151 543 ntBASIC3.78□□□□□ -1.8
VPS52Q8N1B4 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.78□□□□□ -1.8
VPS52Q8N1B4 AL133271.1-201ENST00000538229 291 ntBASIC3.78□□□□□ -1.8
VPS52Q8N1B4 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.78□□□□□ -1.8
VPS52Q8N1B4 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.78□□□□□ -1.8
VPS52Q8N1B4 AL133153.1-201ENST00000557756 303 ntBASIC3.78□□□□□ -1.8
VPS52Q8N1B4 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.78□□□□□ -1.8
VPS52Q8N1B4 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.78□□□□□ -1.8
VPS52Q8N1B4 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.78□□□□□ -1.8
VPS52Q8N1B4 AC245517.5-201ENST00000611529 162 ntBASIC3.78□□□□□ -1.8
VPS52Q8N1B4 AC090970.3-201ENST00000612566 866 ntBASIC3.78□□□□□ -1.8
VPS52Q8N1B4 AC093838.1-201ENST00000613014 469 ntBASIC3.78□□□□□ -1.8
VPS52Q8N1B4 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VPS52Q8N1B4 AC138649.3-201ENST00000622154 254 ntBASIC3.78□□□□□ -1.8
VPS52Q8N1B4 AP003355.3-201ENST00000623465 114 ntBASIC3.78□□□□□ -1.8
VPS52Q8N1B4 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.78□□□□□ -1.8
VPS52Q8N1B4 OR5AK4P-201ENST00000635912 903 ntBASIC3.78□□□□□ -1.8
VPS52Q8N1B4 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.78□□□□□ -1.8
VPS52Q8N1B4 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
VPS52Q8N1B4 AC110774.1-201ENST00000623567 2018 ntBASIC3.78□□□□□ -1.8
VPS52Q8N1B4 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
VPS52Q8N1B4 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
VPS52Q8N1B4 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VPS52Q8N1B4 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms